RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 FAM135BQ49AJ0 1406 aa3.21□□□□□ -1.9
PRPF40A-206ENST00000471167 CCL15-CCL14A0A0B4J2E2 113 aa3.21□□□□□ -1.9
PRPF40A-206ENST00000471167 DUXBA0A1W2PPF3 345 aa3.21□□□□□ -1.9
PRPF40A-206ENST00000471167 F6UZH7 168 aa3.21□□□□□ -1.9
PRPF40A-206ENST00000471167 ZNF806P0C7X5 589 aa3.21□□□□□ -1.9
PRPF40A-206ENST00000471167 SCGB1C2P0DMR2 95 aa3.21□□□□□ -1.9
PRPF40A-206ENST00000471167 CTSEP14091 401 aa3.21□□□□□ -1.9
PRPF40A-206ENST00000471167 ZNF30P17039 623 aa3.21□□□□□ -1.9
PRPF40A-206ENST00000471167 SRIP30626 198 aa3.21□□□□□ -1.9
PRPF40A-206ENST00000471167 PPP1CCP36873 323 aaKnown RBP3.21□□□□□ -1.9
PRPF40A-206ENST00000471167 ATP5G3P48201 142 aa3.21□□□□□ -1.9
PRPF40A-206ENST00000471167 TAS2R30P59541 319 aa3.21□□□□□ -1.9
PRPF40A-206ENST00000471167 SELENOWP63302 87 aa3.21□□□□□ -1.9
PRPF40A-206ENST00000471167 CRADDP78560 199 aa3.21□□□□□ -1.9
PRPF40A-206ENST00000471167 MRPS10P82664 201 aaKnown RBP3.21□□□□□ -1.9
PRPF40A-206ENST00000471167 EGFEM1PQ0D2K5 195 aa3.21□□□□□ -1.9
PRPF40A-206ENST00000471167 BIKQ13323 160 aa3.21□□□□□ -1.9
PRPF40A-206ENST00000471167 MMDQ15546 238 aa3.21□□□□□ -1.9
PRPF40A-206ENST00000471167 CCL15Q16663 113 aa3.21□□□□□ -1.9
PRPF40A-206ENST00000471167 SCGB2B2Q4G0G5 96 aa3.21□□□□□ -1.9
PRPF40A-206ENST00000471167 MORN2Q502X0 79 aa3.21□□□□□ -1.9
PRPF40A-206ENST00000471167 ZNF773Q6PK81 442 aa3.21□□□□□ -1.9
PRPF40A-206ENST00000471167 SCIMPQ6UWF3 145 aa3.21□□□□□ -1.9
PRPF40A-206ENST00000471167 MDP1Q86V88 176 aa3.21□□□□□ -1.9
PRPF40A-206ENST00000471167 KRTCAP2Q8N6L1 136 aa3.21□□□□□ -1.9
PRPF40A-206ENST00000471167 SCGB1C1Q8TD33 95 aa3.21□□□□□ -1.9
PRPF40A-206ENST00000471167 ARL11Q969Q4 196 aa3.21□□□□□ -1.9
PRPF40A-206ENST00000471167 NMNAT3Q96T66 252 aa3.21□□□□□ -1.9
PRPF40A-206ENST00000471167 LXNQ9BS40 222 aa3.21□□□□□ -1.9
PRPF40A-206ENST00000471167 SAMD10Q9BYL1 202 aa3.21□□□□□ -1.9
PRPF40A-206ENST00000471167 LINC00470Q9BZP3 86 aa3.21□□□□□ -1.9
PRPF40A-206ENST00000471167 OR2H1Q9GZK4 316 aa3.21□□□□□ -1.9
PRPF40A-206ENST00000471167 COMMD5Q9GZQ3 224 aa3.21□□□□□ -1.9
PRPF40A-206ENST00000471167 LPAR5Q9H1C0 372 aa3.21□□□□□ -1.9
PRPF40A-206ENST00000471167 Q9H3A6 140 aa3.21□□□□□ -1.9
PRPF40A-206ENST00000471167 CXorf21Q9HAI6 301 aa3.21□□□□□ -1.9
PRPF40A-206ENST00000471167 KCNIP2Q9NS61 270 aa3.21□□□□□ -1.9
PRPF40A-206ENST00000471167 DHCR7Q9UBM7 475 aaKnown RBP3.21□□□□□ -1.9
PRPF40A-206ENST00000471167 RPS6KB2Q9UBS0 482 aa3.21□□□□□ -1.9
PRPF40A-206ENST00000471167 LAMTOR2Q9Y2Q5 125 aa3.21□□□□□ -1.9
PRPF40A-206ENST00000471167 NEUROG3Q9Y4Z2 214 aa3.21□□□□□ -1.9
PRPF40A-206ENST00000471167 FLVCR1Q9Y5Y0 555 aa3.21□□□□□ -1.9
PRPF40A-206ENST00000471167 MED23Q9ULK4 1368 aa3.21□□□□□ -1.9
PRPF40A-206ENST00000471167 UHRF1BP1LA0JNW5 1464 aa3.21□□□□□ -1.9
PRPF40A-206ENST00000471167 ITGB4P16144 1822 aa3.21□□□□□ -1.9
PRPF40A-206ENST00000471167 NFASCO94856 1347 aa3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 VPS8Q8N3P4 1428 aa3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 A0A087WUU8 490 aa3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 LOC102725191A0A1B0GVB3 256 aa3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 ZNF705GA8MUZ8 300 aaPredicted RBP3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 C4orf51C9J302 202 aa3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 C9JAW5 83 aa3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 CLDN25C9JDP6 229 aa3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 NDUFC2-KCTD14E9PQ53 114 aa3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 TMEM250H0YL14 139 aa3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 M0R2Z0 102 aa3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 LGALS9O00182 355 aa3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 PEX7O00628 323 aa3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 TRAF3IP2O43734 574 aaPredicted RBP3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 SLC37A4O43826 429 aa3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 GGCTO75223 188 aaKnown RBP3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 IFNA7P01567 189 aa3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 BGLAPP02818 100 aa3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 SMIM17P0DL12 118 aa3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 RPS4Y1P22090 263 aaKnown RBP3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 EVI2AP22794 236 aa3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 PPIBP23284 216 aaKnown RBP3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 KDELR1P24390 212 aa3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 IL3RAP26951 378 aa3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 EVX1P49640 407 aa3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 HERVK_113P61574 105 aa3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 PSG9Q00887 426 aa3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 OR8G1Q15617 311 aa3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 ORMDL2Q53FV1 153 aa3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 IL34Q6ZMJ4 242 aa3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 BAP18Q8IXM2 172 aa3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 PDZD9Q8IXQ8 264 aa3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 ZNF433Q8N7K0 673 aaPredicted RBP3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 TMEM229BQ8NBD8 167 aa3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 SLC25A40Q8TBP6 338 aa3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 ORAOV1Q8WV07 137 aa3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 SLC7A6Q92536 515 aa3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 FRZBQ92765 325 aa3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 ADAT3Q96EY9 351 aaPredicted RBP3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 IGF2BP2-AS1Q96M15 143 aa3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 YPEL4Q96NS1 127 aa3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 NDFIP1Q9BT67 221 aa3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 PTGES2Q9H7Z7 377 aa3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 ZNF230Q9UIE0 474 aaPredicted RBP3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 TBX21Q9UL17 535 aa3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 TRAPPC2LQ9UL33 140 aa3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 HIGD1AQ9Y241 93 aa3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 ZNF706Q9Y5V0 76 aaPredicted RBP3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 EIF4G3O43432 1585 aaKnown RBP3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 KMT2EQ8IZD2 1858 aa3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 NACAE9PAV3 2078 aa3.2□□□□□ -1.9
PRPF40A-206ENST00000471167 WDR62O43379 1518 aa3.19□□□□□ -1.9
PRPF40A-206ENST00000471167 TRAV19A0A0A6YYK7 116 aa3.19□□□□□ -1.9
PRPF40A-206ENST00000471167 TRAV4A0A0B4J268 109 aa3.19□□□□□ -1.9
PRPF40A-206ENST00000471167 A0A0X1KG70 313 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms