RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 NCR3LG1Q68D85 454 aa6.64□□□□□ -1.35
SMC4-212ENST00000470240 TMEM108Q6UXF1 575 aa6.64□□□□□ -1.35
SMC4-212ENST00000470240 HEPN1Q6WQI6 88 aa6.64□□□□□ -1.35
SMC4-212ENST00000470240 HAPLN4Q86UW8 402 aa6.64□□□□□ -1.35
SMC4-212ENST00000470240 CISD2Q8N5K1 135 aaKnown RBP6.64□□□□□ -1.35
SMC4-212ENST00000470240 TPRX1Q8N7U7 411 aa6.64□□□□□ -1.35
SMC4-212ENST00000470240 NANPQ8TBE9 248 aa6.64□□□□□ -1.35
SMC4-212ENST00000470240 FAM57AQ8TBR7 257 aa6.64□□□□□ -1.35
SMC4-212ENST00000470240 ITLN1Q8WWA0 313 aa6.64□□□□□ -1.35
SMC4-212ENST00000470240 CORO2AQ92828 525 aa6.64□□□□□ -1.35
SMC4-212ENST00000470240 OR5B12Q96R08 314 aa6.64□□□□□ -1.35
SMC4-212ENST00000470240 SMIM7Q9BQ49 75 aa6.64□□□□□ -1.35
SMC4-212ENST00000470240 AGMATQ9BSE5 352 aa6.64□□□□□ -1.35
SMC4-212ENST00000470240 NPCDR1Q9BY65 106 aa6.64□□□□□ -1.35
SMC4-212ENST00000470240 ZNF665Q9H7R5 613 aa6.64□□□□□ -1.35
SMC4-212ENST00000470240 SLC25A22Q9H936 323 aa6.64□□□□□ -1.35
SMC4-212ENST00000470240 C19orf73Q9NVV2 129 aa6.64□□□□□ -1.35
SMC4-212ENST00000470240 ELOVL5Q9NYP7 299 aa6.64□□□□□ -1.35
SMC4-212ENST00000470240 DKK4Q9UBT3 224 aa6.64□□□□□ -1.35
SMC4-212ENST00000470240 IL19Q9UHD0 177 aa6.64□□□□□ -1.35
SMC4-212ENST00000470240 IGLV3-9A0A075B6K5 115 aa6.63□□□□□ -1.35
SMC4-212ENST00000470240 IGKV1D-17A0A075B6S4 117 aa6.63□□□□□ -1.35
SMC4-212ENST00000470240 TRGV8A0A0C4DH27 118 aa6.63□□□□□ -1.35
SMC4-212ENST00000470240 C5orf52A6NGY3 159 aa6.63□□□□□ -1.35
SMC4-212ENST00000470240 PCP4L1A6NKN8 68 aa6.63□□□□□ -1.35
SMC4-212ENST00000470240 F6UZH7 168 aa6.63□□□□□ -1.35
SMC4-212ENST00000470240 KLK10O43240 276 aa6.63□□□□□ -1.35
SMC4-212ENST00000470240 CACNA1GO43497 2377 aa6.63□□□□□ -1.35
SMC4-212ENST00000470240 EGR1P18146 543 aa6.63□□□□□ -1.35
SMC4-212ENST00000470240 CD1BP29016 333 aa6.63□□□□□ -1.35
SMC4-212ENST00000470240 FABP9Q0Z7S8 132 aa6.63□□□□□ -1.35
SMC4-212ENST00000470240 CHD3Q12873 2000 aaKnown RBP6.63□□□□□ -1.35
SMC4-212ENST00000470240 HNF4GQ14541 408 aa6.63□□□□□ -1.35
SMC4-212ENST00000470240 RTL8BQ17RB0 113 aa6.63□□□□□ -1.35
SMC4-212ENST00000470240 TMEM241Q24JQ0 296 aa6.63□□□□□ -1.35
SMC4-212ENST00000470240 KRTAP19-1Q8IUB9 90 aa6.63□□□□□ -1.35
SMC4-212ENST00000470240 NUP37Q8NFH4 326 aa6.63□□□□□ -1.35
SMC4-212ENST00000470240 TXNDC17Q9BRA2 123 aa6.63□□□□□ -1.35
SMC4-212ENST00000470240 GAL3ST2Q9H3Q3 398 aa6.63□□□□□ -1.35
SMC4-212ENST00000470240 NGBQ9NPG2 151 aa6.63□□□□□ -1.35
SMC4-212ENST00000470240 GFOD1Q9NXC2 390 aa6.63□□□□□ -1.35
SMC4-212ENST00000470240 RFNGQ9Y644 331 aa6.63□□□□□ -1.35
SMC4-212ENST00000470240 KIAA2026Q5HYC2 2103 aa6.62□□□□□ -1.35
SMC4-212ENST00000470240 PTPRBP23467 1997 aa6.62□□□□□ -1.35
SMC4-212ENST00000470240 IGHV3OR15-7A0A075B7D8 119 aa6.62□□□□□ -1.35
SMC4-212ENST00000470240 KBTBD11-OT1A0A1B0GTJ5 212 aa6.62□□□□□ -1.35
SMC4-212ENST00000470240 hADV38S2A0JD32 116 aa6.62□□□□□ -1.35
SMC4-212ENST00000470240 LINC00473A8K010 186 aa6.62□□□□□ -1.35
SMC4-212ENST00000470240 PDE6DO43924 150 aa6.62□□□□□ -1.35
SMC4-212ENST00000470240 KBTBD11O94819 623 aa6.62□□□□□ -1.35
SMC4-212ENST00000470240 ATP5IP56385 69 aaPredicted RBP6.62□□□□□ -1.35
SMC4-212ENST00000470240 RBPJQ06330 500 aa6.62□□□□□ -1.35
SMC4-212ENST00000470240 ADIRFQ15847 76 aa6.62□□□□□ -1.35
SMC4-212ENST00000470240 ZNF726P1Q15940 193 aa6.62□□□□□ -1.35
SMC4-212ENST00000470240 AARDQ4LEZ3 155 aa6.62□□□□□ -1.35
SMC4-212ENST00000470240 FAM90A2PQ658T7 463 aa6.62□□□□□ -1.35
SMC4-212ENST00000470240 SP5Q6BEB4 398 aaPredicted RBP6.62□□□□□ -1.35
SMC4-212ENST00000470240 KCNIP4Q6PIL6 250 aa6.62□□□□□ -1.35
SMC4-212ENST00000470240 ZNF474Q6S9Z5 364 aaPredicted RBP6.62□□□□□ -1.35
SMC4-212ENST00000470240 CYP2G1PQ6ZSU1 146 aa6.62□□□□□ -1.35
SMC4-212ENST00000470240 SEM1Q6ZVN7 128 aa6.62□□□□□ -1.35
SMC4-212ENST00000470240 OR10A7Q8NGE5 316 aa6.62□□□□□ -1.35
SMC4-212ENST00000470240 Q8TCH9 128 aa6.62□□□□□ -1.35
SMC4-212ENST00000470240 CA5BP1Q8WTZ4 195 aa6.62□□□□□ -1.35
SMC4-212ENST00000470240 FAM222BQ8WU58 562 aa6.62□□□□□ -1.35
SMC4-212ENST00000470240 RAB1CQ92928 201 aa6.62□□□□□ -1.35
SMC4-212ENST00000470240 NEIL1Q96FI4 390 aaPredicted RBP6.62□□□□□ -1.35
SMC4-212ENST00000470240 SDSLQ96GA7 329 aa6.62□□□□□ -1.35
SMC4-212ENST00000470240 QTRT1Q9BXR0 403 aaKnown RBP6.62□□□□□ -1.35
SMC4-212ENST00000470240 TMPRSS5Q9H3S3 457 aa6.62□□□□□ -1.35
SMC4-212ENST00000470240 VSIRQ9H7M9 311 aa6.62□□□□□ -1.35
SMC4-212ENST00000470240 SDF2L1Q9HCN8 221 aa6.62□□□□□ -1.35
SMC4-212ENST00000470240 TMEM140Q9NV12 185 aa6.62□□□□□ -1.35
SMC4-212ENST00000470240 IDI2-AS1Q9NZ38 188 aa6.62□□□□□ -1.35
SMC4-212ENST00000470240 PRNDQ9UKY0 176 aa6.62□□□□□ -1.35
SMC4-212ENST00000470240 WDR83OSQ9Y284 106 aa6.62□□□□□ -1.35
SMC4-212ENST00000470240 FAM215AQ9Y5M1 114 aa6.62□□□□□ -1.35
SMC4-212ENST00000470240 TRAV38-1A0A0B4J264 116 aa6.61□□□□□ -1.35
SMC4-212ENST00000470240 C15orf62A8K5M9 175 aa6.61□□□□□ -1.35
SMC4-212ENST00000470240 C16orf97H3BN30 126 aa6.61□□□□□ -1.35
SMC4-212ENST00000470240 H7BYZ3 331 aa6.61□□□□□ -1.35
SMC4-212ENST00000470240 PPP1R2P9O14990 202 aa6.61□□□□□ -1.35
SMC4-212ENST00000470240 VENTXO95231 258 aa6.61□□□□□ -1.35
SMC4-212ENST00000470240 LHBP01229 141 aa6.61□□□□□ -1.35
SMC4-212ENST00000470240 APOA2P02652 100 aa6.61□□□□□ -1.35
SMC4-212ENST00000470240 FBP1P09467 338 aa6.61□□□□□ -1.35
SMC4-212ENST00000470240 BMP5P22003 454 aa6.61□□□□□ -1.35
SMC4-212ENST00000470240 CD40P25942 277 aa6.61□□□□□ -1.35
SMC4-212ENST00000470240 CEACAM8P31997 349 aaPredicted RBP6.61□□□□□ -1.35
SMC4-212ENST00000470240 OPRK1P41145 380 aa6.61□□□□□ -1.35
SMC4-212ENST00000470240 RND2P52198 227 aa6.61□□□□□ -1.35
SMC4-212ENST00000470240 MRPS11P82912 194 aaKnown RBP6.61□□□□□ -1.35
SMC4-212ENST00000470240 TFF3Q07654 80 aa6.61□□□□□ -1.35
SMC4-212ENST00000470240 ELOBQ15370 118 aa6.61□□□□□ -1.35
SMC4-212ENST00000470240 BSXQ3C1V8 233 aa6.61□□□□□ -1.35
SMC4-212ENST00000470240 ACSM6Q6P461 480 aa6.61□□□□□ -1.35
SMC4-212ENST00000470240 SSX9Q7RTT3 188 aa6.61□□□□□ -1.35
SMC4-212ENST00000470240 LYG1Q8N1E2 194 aa6.61□□□□□ -1.35
SMC4-212ENST00000470240 ZNRF1Q8ND25 227 aa6.61□□□□□ -1.35
SMC4-212ENST00000470240 OR4F5Q8NH21 305 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms