RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 INSL4Q14641 139 aa13.51□□□□□ -0.25
TTC28-205ENST00000469670 C19orf35Q6ZS72 473 aa13.51□□□□□ -0.25
TTC28-205ENST00000469670 CEACAM19Q7Z692 300 aa13.51□□□□□ -0.25
TTC28-205ENST00000469670 SLC38A6Q8IZM9 456 aa13.51□□□□□ -0.25
TTC28-205ENST00000469670 KIR2DL5AQ8N109 375 aa13.51□□□□□ -0.25
TTC28-205ENST00000469670 OR4A4PQ8NGN8 299 aa13.51□□□□□ -0.25
TTC28-205ENST00000469670 KIR2DL5BQ8NHK3 375 aa13.51□□□□□ -0.25
TTC28-205ENST00000469670 OSR1Q8TAX0 266 aaPredicted RBP13.51□□□□□ -0.25
TTC28-205ENST00000469670 CMSS1Q9BQ75 279 aaKnown RBP13.51□□□□□ -0.25
TTC28-205ENST00000469670 URM1Q9BTM9 101 aaKnown RBP13.51□□□□□ -0.25
TTC28-205ENST00000469670 UBQLN2Q9UHD9 624 aa13.51□□□□□ -0.25
TTC28-205ENST00000469670 S4R3C0 116 aa13.51□□□□□ -0.25
TTC28-205ENST00000469670 DNAH6Q9C0G6 4158 aa13.5□□□□□ -0.25
TTC28-205ENST00000469670 HMX3A6NHT5 357 aa13.5□□□□□ -0.25
TTC28-205ENST00000469670 FOXI3A8MTJ6 420 aaPredicted RBP13.5□□□□□ -0.25
TTC28-205ENST00000469670 BET1O15155 118 aa13.5□□□□□ -0.25
TTC28-205ENST00000469670 BPNT1O95861 308 aa13.5□□□□□ -0.25
TTC28-205ENST00000469670 SAA1P0DJI8 122 aaPredicted RBP13.5□□□□□ -0.25
TTC28-205ENST00000469670 TMEM50BP56557 158 aa13.5□□□□□ -0.25
TTC28-205ENST00000469670 CDK10Q15131 360 aa13.5□□□□□ -0.25
TTC28-205ENST00000469670 RBM48Q5RL73 367 aaKnown RBP13.5□□□□□ -0.25
TTC28-205ENST00000469670 MMD2Q8IY49 270 aa13.5□□□□□ -0.25
TTC28-205ENST00000469670 FAM89BQ8N5H3 189 aa13.5□□□□□ -0.25
TTC28-205ENST00000469670 FBLIM1Q8WUP2 373 aa13.5□□□□□ -0.25
TTC28-205ENST00000469670 ADTRPQ96IZ2 230 aa13.5□□□□□ -0.25
TTC28-205ENST00000469670 FABP7O15540 132 aa13.49□□□□□ -0.25
TTC28-205ENST00000469670 C8orf88P0DMB2 117 aa13.49□□□□□ -0.25
TTC28-205ENST00000469670 DUTP33316 252 aaKnown RBP13.49□□□□□ -0.25
TTC28-205ENST00000469670 ZNF585BQ52M93 769 aa13.49□□□□□ -0.25
TTC28-205ENST00000469670 ACSM3Q53FZ2 586 aa13.49□□□□□ -0.25
TTC28-205ENST00000469670 IGSF11Q5DX21 431 aa13.49□□□□□ -0.25
TTC28-205ENST00000469670 ZFP1Q6P2D0 407 aa13.49□□□□□ -0.25
TTC28-205ENST00000469670 ZNF555Q8NEP9 628 aa13.49□□□□□ -0.25
TTC28-205ENST00000469670 OR10J5Q8NHC4 309 aa13.49□□□□□ -0.25
TTC28-205ENST00000469670 PHYHIPQ92561 330 aa13.49□□□□□ -0.25
TTC28-205ENST00000469670 MARC2Q969Z3 335 aa13.49□□□□□ -0.25
TTC28-205ENST00000469670 ARHGAP5-AS1Q96IT6 56 aa13.49□□□□□ -0.25
TTC28-205ENST00000469670 PECRQ9BY49 303 aa13.49□□□□□ -0.25
TTC28-205ENST00000469670 RBM7Q9Y580 266 aaKnown RBP13.49□□□□□ -0.25
TTC28-205ENST00000469670 EFCAB10A6NFE3 127 aa13.48□□□□□ -0.25
TTC28-205ENST00000469670 LINC00473A8K010 186 aa13.48□□□□□ -0.25
TTC28-205ENST00000469670 NPIPB5A8MRT5 1133 aa13.48□□□□□ -0.25
TTC28-205ENST00000469670 TEX22C9J3V5 150 aa13.48□□□□□ -0.25
TTC28-205ENST00000469670 ATP5HO75947 161 aa13.48□□□□□ -0.25
TTC28-205ENST00000469670 CTRB1P17538 263 aa13.48□□□□□ -0.25
TTC28-205ENST00000469670 RPL35AP18077 110 aaKnown RBP13.48□□□□□ -0.25
TTC28-205ENST00000469670 NANOS2P60321 138 aaKnown RBP13.48□□□□□ -0.25
TTC28-205ENST00000469670 ST3GAL4Q11206 333 aa13.48□□□□□ -0.25
TTC28-205ENST00000469670 CTRB2Q6GPI1 263 aa13.48□□□□□ -0.25
TTC28-205ENST00000469670 UNQ9165/PRO28630Q6UXU0 137 aa13.48□□□□□ -0.25
TTC28-205ENST00000469670 EEF1AKMT3Q96AZ1 226 aa13.48□□□□□ -0.25
TTC28-205ENST00000469670 FANCD2OSQ96PS1 177 aa13.48□□□□□ -0.25
TTC28-205ENST00000469670 SPAG8Q99932 426 aaPredicted RBP13.48□□□□□ -0.25
TTC28-205ENST00000469670 CABLES2Q9BTV7 478 aa13.48□□□□□ -0.25
TTC28-205ENST00000469670 MRPL27Q9P0M9 148 aaKnown RBP13.48□□□□□ -0.25
TTC28-205ENST00000469670 FBXL17Q9UF56 701 aa13.48□□□□□ -0.25
TTC28-205ENST00000469670 TRBV6-7A0A0A0MS04 114 aa13.47□□□□□ -0.25
TTC28-205ENST00000469670 DPPA5A6NC42 116 aa13.47□□□□□ -0.25
TTC28-205ENST00000469670 IFNA4P05014 189 aa13.47□□□□□ -0.25
TTC28-205ENST00000469670 MED14OSP0DP75 135 aa13.47□□□□□ -0.25
TTC28-205ENST00000469670 OR6M1Q8NGM8 313 aa13.47□□□□□ -0.25
TTC28-205ENST00000469670 MFFQ9GZY8 342 aa13.47□□□□□ -0.25
TTC28-205ENST00000469670 MYL12BO14950 172 aa13.46□□□□□ -0.25
TTC28-205ENST00000469670 GSTT2P0CG29 244 aa13.46□□□□□ -0.25
TTC28-205ENST00000469670 GSTT2BP0CG30 244 aa13.46□□□□□ -0.25
TTC28-205ENST00000469670 CD37P11049 281 aa13.46□□□□□ -0.25
TTC28-205ENST00000469670 FCGR2BP31994 310 aaPredicted RBP13.46□□□□□ -0.25
TTC28-205ENST00000469670 WNT4P56705 351 aa13.46□□□□□ -0.25
TTC28-205ENST00000469670 P2RY14Q15391 338 aa13.46□□□□□ -0.25
TTC28-205ENST00000469670 RBMS2Q15434 407 aaKnown RBP13.46□□□□□ -0.25
TTC28-205ENST00000469670 C11orf45Q8TAV5 145 aa13.46□□□□□ -0.25
TTC28-205ENST00000469670 DCUN1D5Q9BTE7 237 aa13.46□□□□□ -0.25
TTC28-205ENST00000469670 C5orf66Q9H5L9 145 aa13.46□□□□□ -0.25
TTC28-205ENST00000469670 MAP6D1Q9H9H5 199 aa13.46□□□□□ -0.25
TTC28-205ENST00000469670 ABCA13Q86UQ4 5058 aa13.45□□□□□ -0.26
TTC28-205ENST00000469670 IL6RP08887 468 aaPredicted RBP13.45□□□□□ -0.26
TTC28-205ENST00000469670 GALP22466 123 aa13.45□□□□□ -0.26
TTC28-205ENST00000469670 TCTAP57738 103 aa13.45□□□□□ -0.26
TTC28-205ENST00000469670 MED22Q15528 200 aa13.45□□□□□ -0.26
TTC28-205ENST00000469670 ODF3L2Q3SX64 289 aa13.45□□□□□ -0.26
TTC28-205ENST00000469670 PLAC9Q5JTB6 97 aa13.45□□□□□ -0.26
TTC28-205ENST00000469670 LINC00336Q6ZUF6 198 aa13.45□□□□□ -0.26
TTC28-205ENST00000469670 SETD9Q8NE22 299 aa13.45□□□□□ -0.26
TTC28-205ENST00000469670 C2CD4CQ8TF44 421 aa13.45□□□□□ -0.26
TTC28-205ENST00000469670 FYTTD1Q96QD9 318 aaKnown RBP13.45□□□□□ -0.26
TTC28-205ENST00000469670 SLC2A9Q9NRM0 540 aa13.45□□□□□ -0.26
TTC28-205ENST00000469670 UFC1Q9Y3C8 167 aa13.45□□□□□ -0.26
TTC28-205ENST00000469670 FAT2Q9NYQ8 4349 aa13.44□□□□□ -0.26
TTC28-205ENST00000469670 E7EUB6 86 aa13.44□□□□□ -0.26
TTC28-205ENST00000469670 TSPAN4O14817 238 aa13.44□□□□□ -0.26
TTC28-205ENST00000469670 FCGR3BO75015 233 aa13.44□□□□□ -0.26
TTC28-205ENST00000469670 DIRAS3O95661 229 aa13.44□□□□□ -0.26
TTC28-205ENST00000469670 DHFRP00374 187 aa13.44□□□□□ -0.26
TTC28-205ENST00000469670 CLEC3BP05452 202 aa13.44□□□□□ -0.26
TTC28-205ENST00000469670 CRYGCP07315 174 aa13.44□□□□□ -0.26
TTC28-205ENST00000469670 RPL27AP46776 148 aaKnown RBP13.44□□□□□ -0.26
TTC28-205ENST00000469670 ELLP55199 621 aaPredicted RBP13.44□□□□□ -0.26
TTC28-205ENST00000469670 MRPS15P82914 257 aaKnown RBP13.44□□□□□ -0.26
TTC28-205ENST00000469670 HSD17B12Q53GQ0 312 aa13.44□□□□□ -0.26
TTC28-205ENST00000469670 MS4A15Q8N5U1 240 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms