RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 TOXO94900 526 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 C5P01031 1676 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 HLA-HP01893 362 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 IFNW1P05000 195 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 DBIP07108 87 aaKnown RBP2.55□□□□□ -2
VPS13D-203ENST00000466732 MMP7P09237 267 aaPredicted RBP2.55□□□□□ -2
VPS13D-203ENST00000466732 ZNF705DP0CH99 300 aaPredicted RBP2.55□□□□□ -2
VPS13D-203ENST00000466732 ZNF705BP0CI00 300 aaPredicted RBP2.55□□□□□ -2
VPS13D-203ENST00000466732 SMIM10L2AP0DMW4 78 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 SMIM10L2BP0DMW5 78 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 ERGP11308 486 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 CYBAP13498 195 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 ATP1B2P14415 290 aaPredicted RBP2.55□□□□□ -2
VPS13D-203ENST00000466732 TCN2P20062 427 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 CD1CP29017 333 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 GABRA3P34903 492 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 CRYBB2P43320 205 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 CX3CR1P49238 355 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 SULT1A2P50226 295 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 SGSHP51688 502 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 HNRNPA3P51991 378 aaKnown RBP2.55□□□□□ -2
VPS13D-203ENST00000466732 FOXA1P55317 472 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 DLX6P56179 175 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 MEF2BQ02080 365 aaPredicted RBP2.55□□□□□ -2
VPS13D-203ENST00000466732 HIST1H1AQ02539 215 aaPredicted RBP2.55□□□□□ -2
VPS13D-203ENST00000466732 AKR1C1Q04828 323 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 PAPPAQ13219 1627 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 ZNF345Q14585 488 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 MAD2L1BPQ15013 274 aaPredicted RBP2.55□□□□□ -2
VPS13D-203ENST00000466732 RGNQ15493 299 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 MMDQ15546 238 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 SSX1Q16384 188 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 TDRG1Q3Y452 100 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 SPATA31B1PQ5VZV4 182 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 OTPQ5XKR4 325 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 STUMQ69YW2 141 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 ARL9Q6T311 187 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 FAM159AQ6UWV7 190 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 MOB1BQ7L9L4 216 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 CALHM3Q86XJ0 350 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 TGIF2LYQ8IUE0 185 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 ZNF567Q8N184 647 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 ZADH2Q8N4Q0 377 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 KCNRGQ8N5I3 272 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 FAM71E2Q8N5Q1 922 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 NOXO1Q8NFA2 376 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 GPR32P1Q8NGA4 272 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 OR11G2Q8NGC1 345 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 OR4B1Q8NGF8 309 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 OR2T27Q8NH04 317 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 SYNPRQ8TBG9 265 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 BLNKQ8WV28 456 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 RNF138Q8WVD3 245 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 RPEQ96AT9 228 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 C10orf35Q96D05 121 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 MUCL1Q96DR8 90 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 SLC25A38Q96DW6 304 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 IMP4Q96G21 291 aaKnown RBP2.55□□□□□ -2
VPS13D-203ENST00000466732 DEFB118Q96PH6 123 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 CICQ96RK0 1608 aaPredicted RBP2.55□□□□□ -2
VPS13D-203ENST00000466732 CDX2Q99626 313 aaPredicted RBP2.55□□□□□ -2
VPS13D-203ENST00000466732 NRTNQ99748 197 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 ANAPC13Q9BS18 74 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 VAMP8Q9BV40 100 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 TM2D1Q9BX74 207 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 ATG5Q9H1Y0 275 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 OR51I2Q9H344 312 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 POPDC3Q9HBV1 291 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 MEPEQ9NQ76 525 aaPredicted RBP2.55□□□□□ -2
VPS13D-203ENST00000466732 INPP5EQ9NRR6 644 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 RBM22Q9NW64 420 aaKnown RBP eCLIP2.55□□□□□ -2
VPS13D-203ENST00000466732 ZNF226Q9NYT6 803 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 DNAJC27Q9NZQ0 273 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 MARCOQ9UEW3 520 aaPredicted RBP2.55□□□□□ -2
VPS13D-203ENST00000466732 TNRC6AQ8NDV7 1962 aaKnown RBP2.54□□□□□ -2
VPS13D-203ENST00000466732 ALPK3Q96L96 1907 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 TSC2P49815 1807 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 QSER1Q2KHR3 1735 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 UBR1Q8IWV7 1749 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 PEAK1Q9H792 1746 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 COL4A4P53420 1690 aaPredicted RBP2.54□□□□□ -2
VPS13D-203ENST00000466732 TRAV36DV7A0A075B6V5 113 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 FXYD6-FXYD2A0A087WZ82 144 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 A0A0B4J2A0 478 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 A0A1B0GX51 115 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 A0A1W2PRF3 423 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 A0A1W2PRM7 423 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 RNF222A6NCQ9 220 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 BBIP1A8MTZ0 92 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 SNRPGP15A8MWD9 76 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 B4DEV8 164 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 E7EQ34 232 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 H3BQ15 152 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 M0R2Z0 102 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 GABRPO00591 440 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 PLPP3O14495 311 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 TRAF3IP2O43734 574 aaPredicted RBP2.54□□□□□ -2
VPS13D-203ENST00000466732 TIMP1P01033 207 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 IL5P05113 134 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 KLK1P06870 262 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms