RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 CMTM5Q96DZ9 223 aa0.58□□□□□ -2.32
NUCKS1-202ENST00000464938 GNPNAT1Q96EK6 184 aaPredicted RBP0.58□□□□□ -2.32
NUCKS1-202ENST00000464938 NMNAT3Q96T66 252 aa0.58□□□□□ -2.32
NUCKS1-202ENST00000464938 TMEM109Q9BVC6 243 aa0.58□□□□□ -2.32
NUCKS1-202ENST00000464938 TTTY13Q9BZ97 58 aa0.58□□□□□ -2.32
NUCKS1-202ENST00000464938 POLR1DQ9Y2S0 133 aa0.58□□□□□ -2.32
NUCKS1-202ENST00000464938 RBM7Q9Y580 266 aaKnown RBP0.58□□□□□ -2.32
NUCKS1-202ENST00000464938 ATP6V1DQ9Y5K8 247 aa0.58□□□□□ -2.32
NUCKS1-202ENST00000464938 SIPA1L1O43166 1804 aa0.57□□□□□ -2.32
NUCKS1-202ENST00000464938 NUP160Q12769 1436 aa0.57□□□□□ -2.32
NUCKS1-202ENST00000464938 TRAV41A0A0B4J266 112 aa0.57□□□□□ -2.32
NUCKS1-202ENST00000464938 A0A1B0GVG6 124 aa0.57□□□□□ -2.32
NUCKS1-202ENST00000464938 SIGLEC16A6NMB1 481 aa0.57□□□□□ -2.32
NUCKS1-202ENST00000464938 A8MUN3 132 aa0.57□□□□□ -2.32
NUCKS1-202ENST00000464938 C21orf140B9A014 251 aa0.57□□□□□ -2.32
NUCKS1-202ENST00000464938 J3QQQ9 107 aa0.57□□□□□ -2.32
NUCKS1-202ENST00000464938 COX7A2LO14548 114 aa0.57□□□□□ -2.32
NUCKS1-202ENST00000464938 TYMSP04818 313 aa0.57□□□□□ -2.32
NUCKS1-202ENST00000464938 REG1AP05451 166 aa0.57□□□□□ -2.32
NUCKS1-202ENST00000464938 HLA-DQB2P05538 268 aa0.57□□□□□ -2.32
NUCKS1-202ENST00000464938 BPGMP07738 259 aa0.57□□□□□ -2.32
NUCKS1-202ENST00000464938 IL3P08700 152 aa0.57□□□□□ -2.32
NUCKS1-202ENST00000464938 CA5AP35218 305 aa0.57□□□□□ -2.32
NUCKS1-202ENST00000464938 RAP1GDS1P52306 607 aa0.57□□□□□ -2.32
NUCKS1-202ENST00000464938 TAS2R20P59543 309 aa0.57□□□□□ -2.32
NUCKS1-202ENST00000464938 RPL26P61254 145 aaKnown RBP0.57□□□□□ -2.32
NUCKS1-202ENST00000464938 ACSM3Q53FZ2 586 aa0.57□□□□□ -2.32
NUCKS1-202ENST00000464938 HSP90B2PQ58FF3 399 aa0.57□□□□□ -2.32
NUCKS1-202ENST00000464938 FAM78BQ5VT40 261 aa0.57□□□□□ -2.32
NUCKS1-202ENST00000464938 CST9Q5W186 159 aa0.57□□□□□ -2.32
NUCKS1-202ENST00000464938 FAM151BQ6UXP7 276 aa0.57□□□□□ -2.32
NUCKS1-202ENST00000464938 ZNF550Q7Z398 422 aa0.57□□□□□ -2.32
NUCKS1-202ENST00000464938 SLC35E3Q7Z769 313 aa0.57□□□□□ -2.32
NUCKS1-202ENST00000464938 UMODL1-AS1Q8N2C9 162 aa0.57□□□□□ -2.32
NUCKS1-202ENST00000464938 GPR32P1Q8NGA4 272 aa0.57□□□□□ -2.32
NUCKS1-202ENST00000464938 OR2T27Q8NH04 317 aa0.57□□□□□ -2.32
NUCKS1-202ENST00000464938 HSPB9Q9BQS6 159 aa0.57□□□□□ -2.32
NUCKS1-202ENST00000464938 MAP1LC3AQ9H492 121 aa0.57□□□□□ -2.32
NUCKS1-202ENST00000464938 HRASLSQ9HDD0 168 aa0.57□□□□□ -2.32
NUCKS1-202ENST00000464938 TAAR3PQ9P1P4 343 aa0.57□□□□□ -2.32
NUCKS1-202ENST00000464938 DKKL1Q9UK85 242 aa0.57□□□□□ -2.32
NUCKS1-202ENST00000464938 ANAPC10Q9UM13 185 aa0.57□□□□□ -2.32
NUCKS1-202ENST00000464938 RPL26L1Q9UNX3 145 aaKnown RBP0.57□□□□□ -2.32
NUCKS1-202ENST00000464938 C15orf41Q9Y2V0 281 aa0.57□□□□□ -2.32
NUCKS1-202ENST00000464938 FN1P02751 2386 aaKnown RBP0.57□□□□□ -2.32
NUCKS1-202ENST00000464938 CR1P17927 2039 aa0.57□□□□□ -2.32
NUCKS1-202ENST00000464938 C9orf84Q5VXU9 1444 aa0.56□□□□□ -2.32
NUCKS1-202ENST00000464938 SCAF11Q99590 1463 aaKnown RBP0.56□□□□□ -2.32
NUCKS1-202ENST00000464938 TRAV7A0A075B6U4 112 aa0.56□□□□□ -2.32
NUCKS1-202ENST00000464938 IGHV1-69-2A0A0G2JMI3 117 aa0.56□□□□□ -2.32
NUCKS1-202ENST00000464938 A0A0J9YW62 118 aa0.56□□□□□ -2.32
NUCKS1-202ENST00000464938 DISC1C4P0D8 188 aa0.56□□□□□ -2.32
NUCKS1-202ENST00000464938 M0QZ92 97 aa0.56□□□□□ -2.32
NUCKS1-202ENST00000464938 LST1O00453 97 aa0.56□□□□□ -2.32
NUCKS1-202ENST00000464938 SSNA1O43805 119 aa0.56□□□□□ -2.32
NUCKS1-202ENST00000464938 PGLYRP1O75594 196 aaPredicted RBP0.56□□□□□ -2.32
NUCKS1-202ENST00000464938 ZNF705DP0CH99 300 aaPredicted RBP0.56□□□□□ -2.32
NUCKS1-202ENST00000464938 ZNF705BP0CI00 300 aaPredicted RBP0.56□□□□□ -2.32
NUCKS1-202ENST00000464938 RPL12P30050 165 aaKnown RBP0.56□□□□□ -2.32
NUCKS1-202ENST00000464938 EMP1P54849 157 aa0.56□□□□□ -2.32
NUCKS1-202ENST00000464938 TPI1P60174 286 aa0.56□□□□□ -2.32
NUCKS1-202ENST00000464938 ERHP84090 104 aaKnown RBP0.56□□□□□ -2.32
NUCKS1-202ENST00000464938 GNA12Q03113 381 aa0.56□□□□□ -2.32
NUCKS1-202ENST00000464938 GLO1Q04760 184 aa0.56□□□□□ -2.32
NUCKS1-202ENST00000464938 PPP1R1AQ13522 171 aa0.56□□□□□ -2.32
NUCKS1-202ENST00000464938 TNFAIP8L3Q5GJ75 292 aa0.56□□□□□ -2.32
NUCKS1-202ENST00000464938 TMEM42Q69YG0 159 aa0.56□□□□□ -2.32
NUCKS1-202ENST00000464938 LYZL1Q6UWQ5 148 aa0.56□□□□□ -2.32
NUCKS1-202ENST00000464938 C5orf46Q6UWT4 87 aa0.56□□□□□ -2.32
NUCKS1-202ENST00000464938 LRRN1Q6UXK5 716 aa0.56□□□□□ -2.32
NUCKS1-202ENST00000464938 RASSF6Q6ZTQ3 369 aa0.56□□□□□ -2.32
NUCKS1-202ENST00000464938 COA5Q86WW8 74 aa0.56□□□□□ -2.32
NUCKS1-202ENST00000464938 SLC22A24Q8N4F4 322 aa0.56□□□□□ -2.32
NUCKS1-202ENST00000464938 DEFB125Q8N687 156 aa0.56□□□□□ -2.32
NUCKS1-202ENST00000464938 PACRGLQ8N7B6 248 aa0.56□□□□□ -2.32
NUCKS1-202ENST00000464938 OR51T1Q8NGJ9 327 aa0.56□□□□□ -2.32
NUCKS1-202ENST00000464938 RAB2BQ8WUD1 216 aa0.56□□□□□ -2.32
NUCKS1-202ENST00000464938 CYSTM1Q9H1C7 97 aa0.56□□□□□ -2.32
NUCKS1-202ENST00000464938 VCX3BQ9H321 246 aa0.56□□□□□ -2.32
NUCKS1-202ENST00000464938 XAGE1AQ9HD64 81 aa0.56□□□□□ -2.32
NUCKS1-202ENST00000464938 ZNHIT6Q9NWK9 470 aaKnown RBP0.56□□□□□ -2.32
NUCKS1-202ENST00000464938 BABAM2Q9NXR7 383 aa0.56□□□□□ -2.32
NUCKS1-202ENST00000464938 PRELID1Q9Y255 219 aa0.56□□□□□ -2.32
NUCKS1-202ENST00000464938 HELZ2Q9BYK8 2649 aaKnown RBP0.56□□□□□ -2.32
NUCKS1-202ENST00000464938 CUL9Q8IWT3 2517 aa0.56□□□□□ -2.32
NUCKS1-202ENST00000464938 DCCP43146 1447 aa0.55□□□□□ -2.32
NUCKS1-202ENST00000464938 ZFHX2Q9C0A1 2572 aaPredicted RBP0.55□□□□□ -2.32
NUCKS1-202ENST00000464938 NUMA1Q14980 2115 aa0.55□□□□□ -2.32
NUCKS1-202ENST00000464938 IGHV1-18A0A0C4DH31 117 aa0.55□□□□□ -2.32
NUCKS1-202ENST00000464938 RFPL4AA6NLU0 287 aa0.55□□□□□ -2.32
NUCKS1-202ENST00000464938 OR4C45A6NMZ5 311 aa0.55□□□□□ -2.32
NUCKS1-202ENST00000464938 RFPL4AL1F8VTS6 287 aa0.55□□□□□ -2.32
NUCKS1-202ENST00000464938 TRAPPC2LH3BP13 241 aa0.55□□□□□ -2.32
NUCKS1-202ENST00000464938 TXNDC9O14530 226 aa0.55□□□□□ -2.32
NUCKS1-202ENST00000464938 PFDN6O15212 129 aa0.55□□□□□ -2.32
NUCKS1-202ENST00000464938 SLC16A4O15374 487 aa0.55□□□□□ -2.32
NUCKS1-202ENST00000464938 PLA2G10O15496 165 aa0.55□□□□□ -2.32
NUCKS1-202ENST00000464938 CIAO1O76071 339 aa0.55□□□□□ -2.32
NUCKS1-202ENST00000464938 NSA2O95478 260 aaKnown RBP0.55□□□□□ -2.32
NUCKS1-202ENST00000464938 SERPINA7P05543 415 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms