RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 ZNF672Q499Z4 452 aaPredicted RBP17.9■□□□□ 0.46
PDLIM2-216ENST00000464275 KHDC3LQ587J8 217 aa17.9■□□□□ 0.46
PDLIM2-216ENST00000464275 MUC15Q8N387 334 aa17.9■□□□□ 0.46
PDLIM2-216ENST00000464275 LEAP2Q969E1 77 aa17.9■□□□□ 0.46
PDLIM2-216ENST00000464275 C12orf57Q99622 126 aa17.9■□□□□ 0.46
PDLIM2-216ENST00000464275 GAL3ST2Q9H3Q3 398 aa17.9■□□□□ 0.46
PDLIM2-216ENST00000464275 RPUSD1Q9UJJ7 312 aaKnown RBP17.9■□□□□ 0.46
PDLIM2-216ENST00000464275 SPTA1P02549 2419 aa17.9■□□□□ 0.46
PDLIM2-216ENST00000464275 PKDREJQ9NTG1 2253 aa17.9■□□□□ 0.46
PDLIM2-216ENST00000464275 DOCK11Q5JSL3 2073 aa17.9■□□□□ 0.46
PDLIM2-216ENST00000464275 GPR37O15354 613 aa17.9■□□□□ 0.46
PDLIM2-216ENST00000464275 NDUFB3O43676 98 aa17.9■□□□□ 0.46
PDLIM2-216ENST00000464275 OR13C7P0DN81 318 aa17.9■□□□□ 0.46
PDLIM2-216ENST00000464275 MEOX2P50222 304 aa17.9■□□□□ 0.46
PDLIM2-216ENST00000464275 HBG1P69891 147 aa17.9■□□□□ 0.46
PDLIM2-216ENST00000464275 HBG2P69892 147 aa17.9■□□□□ 0.46
PDLIM2-216ENST00000464275 TMEM267Q0VDI3 215 aaPredicted RBP17.9■□□□□ 0.46
PDLIM2-216ENST00000464275 UTF1Q5T230 341 aa17.9■□□□□ 0.46
PDLIM2-216ENST00000464275 C1QL4Q86Z23 238 aa17.9■□□□□ 0.46
PDLIM2-216ENST00000464275 C2CD4CQ8TF44 421 aa17.9■□□□□ 0.46
PDLIM2-216ENST00000464275 C5orf52A6NGY3 159 aa17.89■□□□□ 0.45
PDLIM2-216ENST00000464275 MARCH11A6NNE9 402 aa17.89■□□□□ 0.45
PDLIM2-216ENST00000464275 UBE2CO00762 179 aa17.89■□□□□ 0.45
PDLIM2-216ENST00000464275 SRP19P09132 144 aaKnown RBP17.89■□□□□ 0.45
PDLIM2-216ENST00000464275 RPL31P62899 125 aaKnown RBP17.89■□□□□ 0.45
PDLIM2-216ENST00000464275 LRRC10Q5BKY1 277 aa17.89■□□□□ 0.45
PDLIM2-216ENST00000464275 S1PR3Q99500 378 aa17.89■□□□□ 0.45
PDLIM2-216ENST00000464275 TCEAL7Q9BRU2 100 aa17.89■□□□□ 0.45
PDLIM2-216ENST00000464275 TMEM204Q9BSN7 226 aa17.89■□□□□ 0.45
PDLIM2-216ENST00000464275 KAAG1Q9UBP8 84 aa17.89■□□□□ 0.45
PDLIM2-216ENST00000464275 FAM90A9PA6NNJ1 464 aa17.88■□□□□ 0.45
PDLIM2-216ENST00000464275 SCAF4O95104 1147 aaKnown RBP17.88■□□□□ 0.45
PDLIM2-216ENST00000464275 LOXP28300 417 aaPredicted RBP17.88■□□□□ 0.45
PDLIM2-216ENST00000464275 AKR1C3P42330 323 aa17.88■□□□□ 0.45
PDLIM2-216ENST00000464275 PRAMEF5Q5TYX0 476 aa17.88■□□□□ 0.45
PDLIM2-216ENST00000464275 SLC25A24Q6NUK1 477 aa17.88■□□□□ 0.45
PDLIM2-216ENST00000464275 LYPD2Q6UXB3 125 aa17.88■□□□□ 0.45
PDLIM2-216ENST00000464275 ZFP82Q8N141 532 aa17.88■□□□□ 0.45
PDLIM2-216ENST00000464275 SCGB1C1Q8TD33 95 aa17.88■□□□□ 0.45
PDLIM2-216ENST00000464275 DDB2Q92466 427 aa17.88■□□□□ 0.45
PDLIM2-216ENST00000464275 A0A1W2PPE3 182 aa17.88■□□□□ 0.45
PDLIM2-216ENST00000464275 A0A1W2PPH5 198 aa17.88■□□□□ 0.45
PDLIM2-216ENST00000464275 THBS3P49746 956 aa17.88■□□□□ 0.45
PDLIM2-216ENST00000464275 ADTRPQ96IZ2 230 aa17.88■□□□□ 0.45
PDLIM2-216ENST00000464275 RARRES2Q99969 163 aa17.88■□□□□ 0.45
PDLIM2-216ENST00000464275 SAA2-SAA4A0A096LPE2 208 aa17.87■□□□□ 0.45
PDLIM2-216ENST00000464275 FCN3O75636 299 aa17.87■□□□□ 0.45
PDLIM2-216ENST00000464275 MMP23AO75900 390 aa17.87■□□□□ 0.45
PDLIM2-216ENST00000464275 SAA2P0DJI9 122 aaPredicted RBP17.87■□□□□ 0.45
PDLIM2-216ENST00000464275 CCL20P78556 96 aa17.87■□□□□ 0.45
PDLIM2-216ENST00000464275 MRPS11P82912 194 aaKnown RBP17.87■□□□□ 0.45
PDLIM2-216ENST00000464275 SERF2P84101 59 aa17.87■□□□□ 0.45
PDLIM2-216ENST00000464275 LYG1Q8N1E2 194 aa17.87■□□□□ 0.45
PDLIM2-216ENST00000464275 CLDND2Q8NHS1 167 aa17.87■□□□□ 0.45
PDLIM2-216ENST00000464275 METTL1Q9UBP6 276 aaKnown RBP17.87■□□□□ 0.45
PDLIM2-216ENST00000464275 CXorf65A6NEN9 183 aa17.86■□□□□ 0.45
PDLIM2-216ENST00000464275 METTL15P1P0C7V9 234 aa17.86■□□□□ 0.45
PDLIM2-216ENST00000464275 SMIM6P0DI80 62 aa17.86■□□□□ 0.45
PDLIM2-216ENST00000464275 DAOP14920 347 aa17.86■□□□□ 0.45
PDLIM2-216ENST00000464275 TFF3Q07654 80 aa17.86■□□□□ 0.45
PDLIM2-216ENST00000464275 ICAM4Q14773 271 aa17.86■□□□□ 0.45
PDLIM2-216ENST00000464275 C1orf229Q6ZS94 237 aaPredicted RBP17.86■□□□□ 0.45
PDLIM2-216ENST00000464275 SLC25A48Q6ZT89 311 aaKnown RBP17.86■□□□□ 0.45
PDLIM2-216ENST00000464275 FAM122AQ96E09 287 aa17.86■□□□□ 0.45
PDLIM2-216ENST00000464275 ZNF714Q96N38 554 aa17.86■□□□□ 0.45
PDLIM2-216ENST00000464275 ZNF251Q9BRH9 671 aa17.86■□□□□ 0.45
PDLIM2-216ENST00000464275 C20orf24Q9BUV8 137 aa17.86■□□□□ 0.45
PDLIM2-216ENST00000464275 SIRT7Q9NRC8 400 aa17.86■□□□□ 0.45
PDLIM2-216ENST00000464275 GNG10P50151 68 aa17.86■□□□□ 0.45
PDLIM2-216ENST00000464275 ERVK-16P61578 105 aa17.86■□□□□ 0.45
PDLIM2-216ENST00000464275 SPANXN5Q5MJ07 72 aa17.86■□□□□ 0.45
PDLIM2-216ENST00000464275 SLC35E3Q7Z769 313 aa17.86■□□□□ 0.45
PDLIM2-216ENST00000464275 OR4S2Q8NH73 311 aa17.86■□□□□ 0.45
PDLIM2-216ENST00000464275 PUS1Q9Y606 427 aaKnown RBP eCLIP17.86■□□□□ 0.45
PDLIM2-216ENST00000464275 TET2Q6N021 2002 aaPredicted RBP17.86■□□□□ 0.45
PDLIM2-216ENST00000464275 TMEM8BA6NDV4 472 aa17.85■□□□□ 0.45
PDLIM2-216ENST00000464275 OR2C1O95371 312 aa17.85■□□□□ 0.45
PDLIM2-216ENST00000464275 IFNA17P01571 189 aa17.85■□□□□ 0.45
PDLIM2-216ENST00000464275 PPOXP50336 477 aa17.85■□□□□ 0.45
PDLIM2-216ENST00000464275 SNRPEP62304 92 aaKnown RBP17.85■□□□□ 0.45
PDLIM2-216ENST00000464275 RUNX1Q01196 453 aa17.85■□□□□ 0.45
PDLIM2-216ENST00000464275 TMEM200BQ69YZ2 307 aa17.85■□□□□ 0.45
PDLIM2-216ENST00000464275 TMEM14EPQ6UXP3 125 aa17.85■□□□□ 0.45
PDLIM2-216ENST00000464275 HEPN1Q6WQI6 88 aa17.85■□□□□ 0.45
PDLIM2-216ENST00000464275 THNSL2Q86YJ6 484 aa17.85■□□□□ 0.45
PDLIM2-216ENST00000464275 H1FXQ92522 213 aaKnown RBP17.85■□□□□ 0.45
PDLIM2-216ENST00000464275 PINX1Q96BK5 328 aaKnown RBP17.85■□□□□ 0.45
PDLIM2-216ENST00000464275 CIB3Q96Q77 187 aaPredicted RBP17.85■□□□□ 0.45
PDLIM2-216ENST00000464275 NIPSNAP3BQ9BS92 247 aa17.85■□□□□ 0.45
PDLIM2-216ENST00000464275 CTSZQ9UBR2 303 aa17.85■□□□□ 0.45
PDLIM2-216ENST00000464275 A0A1B0GV50 99 aa17.84■□□□□ 0.45
PDLIM2-216ENST00000464275 MED19A0JLT2 244 aaPredicted RBP17.84■□□□□ 0.45
PDLIM2-216ENST00000464275 B4DEV8 164 aa17.84■□□□□ 0.45
PDLIM2-216ENST00000464275 H3BQ15 152 aa17.84■□□□□ 0.45
PDLIM2-216ENST00000464275 DVL1O14640 695 aa17.84■□□□□ 0.45
PDLIM2-216ENST00000464275 RBMXL2O75526 392 aaKnown RBP17.84■□□□□ 0.45
PDLIM2-216ENST00000464275 NQO2P16083 231 aa17.84■□□□□ 0.45
PDLIM2-216ENST00000464275 HAPLN4Q86UW8 402 aa17.84■□□□□ 0.45
PDLIM2-216ENST00000464275 MBD3L1Q8WWY6 194 aa17.84■□□□□ 0.45
PDLIM2-216ENST00000464275 ISOC2Q96AB3 205 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms