RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 DPPA5A6NC42 116 aa10.75□□□□□ -0.69
SMC1A-204ENST00000463684 A8MWP6 167 aa10.75□□□□□ -0.69
SMC1A-204ENST00000463684 IGHV3-23P01764 117 aa10.75□□□□□ -0.69
SMC1A-204ENST00000463684 MRPS15P82914 257 aaKnown RBP10.75□□□□□ -0.69
SMC1A-204ENST00000463684 QRFPP83859 136 aa10.75□□□□□ -0.69
SMC1A-204ENST00000463684 ST3GAL4Q11206 333 aa10.75□□□□□ -0.69
SMC1A-204ENST00000463684 ACSM3Q53FZ2 586 aa10.75□□□□□ -0.69
SMC1A-204ENST00000463684 LRRTM1Q86UE6 522 aa10.75□□□□□ -0.69
SMC1A-204ENST00000463684 MMD2Q8IY49 270 aa10.75□□□□□ -0.69
SMC1A-204ENST00000463684 KIR2DL5AQ8N109 375 aa10.75□□□□□ -0.69
SMC1A-204ENST00000463684 FAM89BQ8N5H3 189 aa10.75□□□□□ -0.69
SMC1A-204ENST00000463684 KIR2DL5BQ8NHK3 375 aa10.75□□□□□ -0.69
SMC1A-204ENST00000463684 PHYHIPQ92561 330 aa10.75□□□□□ -0.69
SMC1A-204ENST00000463684 MARC2Q969Z3 335 aa10.75□□□□□ -0.69
SMC1A-204ENST00000463684 EFCAB10A6NFE3 127 aa10.74□□□□□ -0.69
SMC1A-204ENST00000463684 FABP7O15540 132 aa10.74□□□□□ -0.69
SMC1A-204ENST00000463684 IFNA4P05014 189 aa10.74□□□□□ -0.69
SMC1A-204ENST00000463684 CD3GP09693 182 aa10.74□□□□□ -0.69
SMC1A-204ENST00000463684 GSTT2P0CG29 244 aa10.74□□□□□ -0.69
SMC1A-204ENST00000463684 GSTT2BP0CG30 244 aa10.74□□□□□ -0.69
SMC1A-204ENST00000463684 CDK10Q15131 360 aa10.74□□□□□ -0.69
SMC1A-204ENST00000463684 ZNF585BQ52M93 769 aa10.74□□□□□ -0.69
SMC1A-204ENST00000463684 OR6M1Q8NGM8 313 aa10.74□□□□□ -0.69
SMC1A-204ENST00000463684 EEF1AKMT3Q96AZ1 226 aa10.74□□□□□ -0.69
SMC1A-204ENST00000463684 ARHGAP5-AS1Q96IT6 56 aa10.74□□□□□ -0.69
SMC1A-204ENST00000463684 DCUN1D5Q9BTE7 237 aa10.74□□□□□ -0.69
SMC1A-204ENST00000463684 PECRQ9BY49 303 aa10.74□□□□□ -0.69
SMC1A-204ENST00000463684 HMX3A6NHT5 357 aa10.73□□□□□ -0.69
SMC1A-204ENST00000463684 MYL12BO14950 172 aa10.73□□□□□ -0.69
SMC1A-204ENST00000463684 DHFRP00374 187 aa10.73□□□□□ -0.69
SMC1A-204ENST00000463684 SAA1P0DJI8 122 aaPredicted RBP10.73□□□□□ -0.69
SMC1A-204ENST00000463684 DUTP33316 252 aaKnown RBP10.73□□□□□ -0.69
SMC1A-204ENST00000463684 TMEM50BP56557 158 aa10.73□□□□□ -0.69
SMC1A-204ENST00000463684 WNT4P56705 351 aa10.73□□□□□ -0.69
SMC1A-204ENST00000463684 INSL4Q14641 139 aa10.73□□□□□ -0.69
SMC1A-204ENST00000463684 MED22Q15528 200 aa10.73□□□□□ -0.69
SMC1A-204ENST00000463684 IGSF11Q5DX21 431 aa10.73□□□□□ -0.69
SMC1A-204ENST00000463684 C10orf55Q5SWW7 151 aa10.73□□□□□ -0.69
SMC1A-204ENST00000463684 CEACAM19Q7Z692 300 aa10.73□□□□□ -0.69
SMC1A-204ENST00000463684 C10orf67Q8IYJ2 551 aa10.73□□□□□ -0.69
SMC1A-204ENST00000463684 MS4A15Q8N5U1 240 aa10.73□□□□□ -0.69
SMC1A-204ENST00000463684 C5orf30Q96GV9 206 aa10.73□□□□□ -0.69
SMC1A-204ENST00000463684 CCDC140Q96MF4 163 aa10.73□□□□□ -0.69
SMC1A-204ENST00000463684 SPAG8Q99932 426 aaPredicted RBP10.73□□□□□ -0.69
SMC1A-204ENST00000463684 MFFQ9GZY8 342 aa10.73□□□□□ -0.69
SMC1A-204ENST00000463684 MRPL27Q9P0M9 148 aaKnown RBP10.73□□□□□ -0.69
SMC1A-204ENST00000463684 UBQLN2Q9UHD9 624 aa10.73□□□□□ -0.69
SMC1A-204ENST00000463684 S4R3C0 116 aa10.73□□□□□ -0.69
SMC1A-204ENST00000463684 TRBV6-7A0A0A0MS04 114 aa10.72□□□□□ -0.69
SMC1A-204ENST00000463684 NPIPB5A8MRT5 1133 aa10.72□□□□□ -0.69
SMC1A-204ENST00000463684 C8orf88P0DMB2 117 aa10.72□□□□□ -0.69
SMC1A-204ENST00000463684 FBLIM1Q8WUP2 373 aa10.72□□□□□ -0.69
SMC1A-204ENST00000463684 GINS4Q9BRT9 223 aa10.72□□□□□ -0.69
SMC1A-204ENST00000463684 PLGRKTQ9HBL7 147 aa10.72□□□□□ -0.69
SMC1A-204ENST00000463684 SMPD3Q9NY59 655 aaPredicted RBP10.72□□□□□ -0.69
SMC1A-204ENST00000463684 TRBV7-1A0A0A6YYK4 115 aa10.71□□□□□ -0.69
SMC1A-204ENST00000463684 LINC00473A8K010 186 aa10.71□□□□□ -0.69
SMC1A-204ENST00000463684 FOXI3A8MTJ6 420 aaPredicted RBP10.71□□□□□ -0.69
SMC1A-204ENST00000463684 CLEC3BP05452 202 aa10.71□□□□□ -0.69
SMC1A-204ENST00000463684 CD37P11049 281 aa10.71□□□□□ -0.69
SMC1A-204ENST00000463684 HIST1H1BP16401 226 aaKnown RBP10.71□□□□□ -0.69
SMC1A-204ENST00000463684 RPL35AP18077 110 aaKnown RBP10.71□□□□□ -0.69
SMC1A-204ENST00000463684 GALP22466 123 aa10.71□□□□□ -0.69
SMC1A-204ENST00000463684 TCTAP57738 103 aa10.71□□□□□ -0.69
SMC1A-204ENST00000463684 PRR20EP86478 221 aa10.71□□□□□ -0.69
SMC1A-204ENST00000463684 PRR20CP86479 221 aa10.71□□□□□ -0.69
SMC1A-204ENST00000463684 PRR20DP86480 221 aa10.71□□□□□ -0.69
SMC1A-204ENST00000463684 PRR20BP86481 221 aa10.71□□□□□ -0.69
SMC1A-204ENST00000463684 PRR20AP86496 221 aa10.71□□□□□ -0.69
SMC1A-204ENST00000463684 P2RY14Q15391 338 aa10.71□□□□□ -0.69
SMC1A-204ENST00000463684 RBMS2Q15434 407 aaKnown RBP10.71□□□□□ -0.69
SMC1A-204ENST00000463684 HSD17B12Q53GQ0 312 aa10.71□□□□□ -0.69
SMC1A-204ENST00000463684 OR56B1Q8NGI3 324 aa10.71□□□□□ -0.69
SMC1A-204ENST00000463684 C11orf45Q8TAV5 145 aa10.71□□□□□ -0.69
SMC1A-204ENST00000463684 FYTTD1Q96QD9 318 aaKnown RBP10.71□□□□□ -0.69
SMC1A-204ENST00000463684 CABLES2Q9BTV7 478 aa10.71□□□□□ -0.69
SMC1A-204ENST00000463684 OR51E2Q9H255 320 aa10.71□□□□□ -0.69
SMC1A-204ENST00000463684 C5orf66Q9H5L9 145 aa10.71□□□□□ -0.69
SMC1A-204ENST00000463684 SLC2A9Q9NRM0 540 aa10.71□□□□□ -0.69
SMC1A-204ENST00000463684 FBXL17Q9UF56 701 aa10.71□□□□□ -0.69
SMC1A-204ENST00000463684 UFC1Q9Y3C8 167 aa10.71□□□□□ -0.69
SMC1A-204ENST00000463684 TEX22C9J3V5 150 aa10.7□□□□□ -0.7
SMC1A-204ENST00000463684 FCGR3BO75015 233 aa10.7□□□□□ -0.7
SMC1A-204ENST00000463684 DIRAS3O95661 229 aa10.7□□□□□ -0.7
SMC1A-204ENST00000463684 DEFA4P12838 97 aa10.7□□□□□ -0.7
SMC1A-204ENST00000463684 MYOD1P15172 320 aa10.7□□□□□ -0.7
SMC1A-204ENST00000463684 RPL27AP46776 148 aaKnown RBP10.7□□□□□ -0.7
SMC1A-204ENST00000463684 ELLP55199 621 aaPredicted RBP10.7□□□□□ -0.7
SMC1A-204ENST00000463684 NANOS2P60321 138 aaKnown RBP10.7□□□□□ -0.7
SMC1A-204ENST00000463684 LAMTOR1Q6IAA8 161 aa10.7□□□□□ -0.7
SMC1A-204ENST00000463684 UNQ9165/PRO28630Q6UXU0 137 aa10.7□□□□□ -0.7
SMC1A-204ENST00000463684 C19orf35Q6ZS72 473 aa10.7□□□□□ -0.7
SMC1A-204ENST00000463684 SETD9Q8NE22 299 aa10.7□□□□□ -0.7
SMC1A-204ENST00000463684 VSTM2AQ8TAG5 236 aa10.7□□□□□ -0.7
SMC1A-204ENST00000463684 C2CD4CQ8TF44 421 aa10.7□□□□□ -0.7
SMC1A-204ENST00000463684 GALNT14Q96FL9 552 aa10.7□□□□□ -0.7
SMC1A-204ENST00000463684 CXorf58Q96LI9 332 aa10.7□□□□□ -0.7
SMC1A-204ENST00000463684 FANCD2OSQ96PS1 177 aa10.7□□□□□ -0.7
SMC1A-204ENST00000463684 C6orf62Q9GZU0 229 aaPredicted RBP10.7□□□□□ -0.7
SMC1A-204ENST00000463684 MAP6D1Q9H9H5 199 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms