RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 RPA2P15927 270 aa11.06□□□□□ -0.64
PHACTR4-203ENST00000463428 CBX3Q13185 183 aa11.06□□□□□ -0.64
PHACTR4-203ENST00000463428 DHRS2Q13268 280 aa11.06□□□□□ -0.64
PHACTR4-203ENST00000463428 PSG5Q15238 335 aa11.06□□□□□ -0.64
PHACTR4-203ENST00000463428 MRGPRG-AS1Q2M3A8 158 aa11.06□□□□□ -0.64
PHACTR4-203ENST00000463428 ANKRD55Q3KP44 614 aa11.06□□□□□ -0.64
PHACTR4-203ENST00000463428 LIAT1Q6ZQX7 453 aa11.06□□□□□ -0.64
PHACTR4-203ENST00000463428 LYG2Q86SG7 212 aa11.06□□□□□ -0.64
PHACTR4-203ENST00000463428 Q8N9W7 124 aa11.06□□□□□ -0.64
PHACTR4-203ENST00000463428 OR8H1Q8NGG4 311 aa11.06□□□□□ -0.64
PHACTR4-203ENST00000463428 OR52B4Q8NGK2 314 aa11.06□□□□□ -0.64
PHACTR4-203ENST00000463428 HARBI1Q96MB7 349 aa11.06□□□□□ -0.64
PHACTR4-203ENST00000463428 SLC25A33Q9BSK2 321 aa11.06□□□□□ -0.64
PHACTR4-203ENST00000463428 COMMD9Q9P000 198 aa11.06□□□□□ -0.64
PHACTR4-203ENST00000463428 BTBD17A6NE02 478 aa11.05□□□□□ -0.64
PHACTR4-203ENST00000463428 SERPINE2P07093 398 aa11.05□□□□□ -0.64
PHACTR4-203ENST00000463428 NQO2P16083 231 aa11.05□□□□□ -0.64
PHACTR4-203ENST00000463428 VAMP1P23763 118 aa11.05□□□□□ -0.64
PHACTR4-203ENST00000463428 C16orf82Q7Z2V1 217 aa11.05□□□□□ -0.64
PHACTR4-203ENST00000463428 SELENOHQ8IZQ5 122 aaKnown RBP11.05□□□□□ -0.64
PHACTR4-203ENST00000463428 PUSL1Q8N0Z8 303 aaKnown RBP11.05□□□□□ -0.64
PHACTR4-203ENST00000463428 CADM3Q8N126 398 aa11.05□□□□□ -0.64
PHACTR4-203ENST00000463428 FAM71E2Q8N5Q1 922 aa11.05□□□□□ -0.64
PHACTR4-203ENST00000463428 LRTM2Q8N967 370 aa11.05□□□□□ -0.64
PHACTR4-203ENST00000463428 SEC22AQ96IW7 307 aa11.05□□□□□ -0.64
PHACTR4-203ENST00000463428 TSNAXQ99598 290 aaKnown RBP11.05□□□□□ -0.64
PHACTR4-203ENST00000463428 SEC22CQ9BRL7 303 aa11.05□□□□□ -0.64
PHACTR4-203ENST00000463428 A0A0B4J293 547 aa11.04□□□□□ -0.64
PHACTR4-203ENST00000463428 RRHO14718 337 aa11.04□□□□□ -0.64
PHACTR4-203ENST00000463428 NBR2O15453 112 aa11.04□□□□□ -0.64
PHACTR4-203ENST00000463428 FGF16O43320 207 aa11.04□□□□□ -0.64
PHACTR4-203ENST00000463428 TCF21O43680 179 aa11.04□□□□□ -0.64
PHACTR4-203ENST00000463428 GPR137BO60478 399 aa11.04□□□□□ -0.64
PHACTR4-203ENST00000463428 SPDEFO95238 335 aa11.04□□□□□ -0.64
PHACTR4-203ENST00000463428 DUS4LO95620 317 aaKnown RBP11.04□□□□□ -0.64
PHACTR4-203ENST00000463428 HRASP01112 189 aa11.04□□□□□ -0.64
PHACTR4-203ENST00000463428 IGKV1-5P01602 117 aa11.04□□□□□ -0.64
PHACTR4-203ENST00000463428 HLA-AP01891 365 aaKnown RBP11.04□□□□□ -0.64
PHACTR4-203ENST00000463428 RNASE1P07998 156 aaKnown RBP11.04□□□□□ -0.64
PHACTR4-203ENST00000463428 P0C879 139 aa11.04□□□□□ -0.64
PHACTR4-203ENST00000463428 SAA1P0DJI8 122 aaPredicted RBP11.04□□□□□ -0.64
PHACTR4-203ENST00000463428 UBE2KP61086 200 aa11.04□□□□□ -0.64
PHACTR4-203ENST00000463428 UBA52P62987 128 aaKnown RBP11.04□□□□□ -0.64
PHACTR4-203ENST00000463428 MMDQ15546 238 aa11.04□□□□□ -0.64
PHACTR4-203ENST00000463428 C4orf46Q504U0 113 aa11.04□□□□□ -0.64
PHACTR4-203ENST00000463428 C11orf88Q6PI97 169 aa11.04□□□□□ -0.64
PHACTR4-203ENST00000463428 VKORC1L1Q8N0U8 176 aa11.04□□□□□ -0.64
PHACTR4-203ENST00000463428 C5orf56Q8N8D9 126 aa11.04□□□□□ -0.64
PHACTR4-203ENST00000463428 IL22RA2Q969J5 263 aa11.04□□□□□ -0.64
PHACTR4-203ENST00000463428 R3HDM4Q96D70 268 aa11.04□□□□□ -0.64
PHACTR4-203ENST00000463428 RHOVQ96L33 236 aa11.04□□□□□ -0.64
PHACTR4-203ENST00000463428 JMJD8Q96S16 334 aa11.04□□□□□ -0.64
PHACTR4-203ENST00000463428 FBXL15Q9H469 300 aa11.04□□□□□ -0.64
PHACTR4-203ENST00000463428 NIPBLQ6KC79 2804 aaeCLIP11.04□□□□□ -0.64
PHACTR4-203ENST00000463428 MARCH11A6NNE9 402 aa11.03□□□□□ -0.64
PHACTR4-203ENST00000463428 SLC25A17O43808 307 aa11.03□□□□□ -0.64
PHACTR4-203ENST00000463428 PRAF2O60831 178 aa11.03□□□□□ -0.64
PHACTR4-203ENST00000463428 DHFRP00374 187 aa11.03□□□□□ -0.64
PHACTR4-203ENST00000463428 KRASP01116 189 aa11.03□□□□□ -0.64
PHACTR4-203ENST00000463428 ANXA3P12429 323 aa11.03□□□□□ -0.64
PHACTR4-203ENST00000463428 G6PCP35575 357 aa11.03□□□□□ -0.64
PHACTR4-203ENST00000463428 C5orf64Q2M2E5 130 aa11.03□□□□□ -0.64
PHACTR4-203ENST00000463428 TRIM16LQ309B1 348 aa11.03□□□□□ -0.64
PHACTR4-203ENST00000463428 LURAP1LQ8IV03 231 aa11.03□□□□□ -0.64
PHACTR4-203ENST00000463428 LGI3Q8N145 548 aa11.03□□□□□ -0.64
PHACTR4-203ENST00000463428 TEX45Q8NA69 505 aa11.03□□□□□ -0.64
PHACTR4-203ENST00000463428 MINDY2Q8NBR6 621 aa11.03□□□□□ -0.64
PHACTR4-203ENST00000463428 ZNF431Q8TF32 576 aaPredicted RBP11.03□□□□□ -0.64
PHACTR4-203ENST00000463428 CASTOR1Q8WTX7 329 aa11.03□□□□□ -0.64
PHACTR4-203ENST00000463428 MITD1Q8WV92 249 aa11.03□□□□□ -0.64
PHACTR4-203ENST00000463428 RBPMSQ93062 196 aaKnown RBP11.03□□□□□ -0.64
PHACTR4-203ENST00000463428 TPSG1Q9NRR2 321 aa11.03□□□□□ -0.64
PHACTR4-203ENST00000463428 C1RLQ9NZP8 487 aa11.03□□□□□ -0.64
PHACTR4-203ENST00000463428 SIGLEC9Q9Y336 463 aa11.03□□□□□ -0.64
PHACTR4-203ENST00000463428 MOB4Q9Y3A3 225 aa11.03□□□□□ -0.64
PHACTR4-203ENST00000463428 TET2Q6N021 2002 aaPredicted RBP11.02□□□□□ -0.64
PHACTR4-203ENST00000463428 JMJD1CQ15652 2540 aa11.02□□□□□ -0.64
PHACTR4-203ENST00000463428 A0A0B4J2A0 478 aa11.02□□□□□ -0.64
PHACTR4-203ENST00000463428 A0A0G2JRQ6 117 aa11.02□□□□□ -0.64
PHACTR4-203ENST00000463428 C7orf66A4D0T2 115 aa11.02□□□□□ -0.64
PHACTR4-203ENST00000463428 NCBP2LA6PVI3 153 aaKnown RBP11.02□□□□□ -0.64
PHACTR4-203ENST00000463428 FCN1O00602 326 aa11.02□□□□□ -0.64
PHACTR4-203ENST00000463428 TMEM268Q5VZI3 342 aa11.02□□□□□ -0.64
PHACTR4-203ENST00000463428 OR4A47Q6IF82 309 aa11.02□□□□□ -0.64
PHACTR4-203ENST00000463428 SSX9Q7RTT3 188 aa11.02□□□□□ -0.64
PHACTR4-203ENST00000463428 LYZL2Q7Z4W2 148 aa11.02□□□□□ -0.64
PHACTR4-203ENST00000463428 ZNF695Q8IW36 515 aa11.02□□□□□ -0.64
PHACTR4-203ENST00000463428 SLC35G3Q8N808 338 aa11.02□□□□□ -0.64
PHACTR4-203ENST00000463428 TMEM167AQ8TBQ9 72 aa11.02□□□□□ -0.64
PHACTR4-203ENST00000463428 AIFM2Q9BRQ8 373 aa11.02□□□□□ -0.64
PHACTR4-203ENST00000463428 BET1LQ9NYM9 111 aa11.02□□□□□ -0.64
PHACTR4-203ENST00000463428 METTL1Q9UBP6 276 aaKnown RBP11.02□□□□□ -0.64
PHACTR4-203ENST00000463428 SHPKQ9UHJ6 478 aa11.02□□□□□ -0.64
PHACTR4-203ENST00000463428 TRAV3A0A0B4J244 114 aa11.01□□□□□ -0.65
PHACTR4-203ENST00000463428 FAM181BA6NEQ2 426 aa11.01□□□□□ -0.65
PHACTR4-203ENST00000463428 DBX1A6NMT0 343 aa11.01□□□□□ -0.65
PHACTR4-203ENST00000463428 SNRPGP15A8MWD9 76 aa11.01□□□□□ -0.65
PHACTR4-203ENST00000463428 OR2A4O95047 310 aa11.01□□□□□ -0.65
PHACTR4-203ENST00000463428 BLCAPP62952 87 aa11.01□□□□□ -0.65
PHACTR4-203ENST00000463428 SRPXP78539 464 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms