RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 USP24Q9UPU5 2620 aa2.94□□□□□ -1.94
UBA3-204ENST00000461522 NUP214P35658 2090 aaPredicted RBP2.94□□□□□ -1.94
UBA3-204ENST00000461522 SCN2AQ99250 2005 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 PIEZO2Q9H5I5 2752 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 A0A1B0GW55 424 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 ISPDA4D126 451 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 H0Y9J4 135 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 K7ERU9 68 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 OR2T1O43869 369 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 NPIPB7O75200 414 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 FKBP6O75344 327 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 TOXO94900 526 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 CLIC3O95833 236 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 DUX4L2P0CJ85 424 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 DUX4L3P0CJ86 424 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 DUX4L5P0CJ88 424 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 DUX4L6P0CJ89 424 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 DUX4L7P0CJ90 424 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 CCL3P10147 92 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 TBPP20226 339 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 LOXP28300 417 aaPredicted RBP2.93□□□□□ -1.94
UBA3-204ENST00000461522 RPL12P30050 165 aaKnown RBP2.93□□□□□ -1.94
UBA3-204ENST00000461522 RPL4P36578 427 aaKnown RBP2.93□□□□□ -1.94
UBA3-204ENST00000461522 MAP2K4P45985 399 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 KLF3P57682 345 aaPredicted RBP2.93□□□□□ -1.94
UBA3-204ENST00000461522 CKS1BP61024 79 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 TGFBR3Q03167 851 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 ST3GAL4Q11206 333 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 UNC119Q13432 240 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 GUSBP1Q15486 140 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 UBE2V2Q15819 145 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 HLA-DRB5Q30154 266 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 PLPPR5Q32ZL2 321 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 CYBRD1Q53TN4 286 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 TMEM128Q5BJH2 165 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 LCE1CQ5T751 118 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 LCE1BQ5T7P3 118 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 HBMQ6B0K9 141 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 STEAP1BQ6NZ63 245 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 C16orf47Q6ZP98 133 aaPredicted RBP2.93□□□□□ -1.94
UBA3-204ENST00000461522 FAM19A1Q7Z5A9 133 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 MARCH3Q86UD3 253 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 RDH10Q8IZV5 341 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 VKORC1L1Q8N0U8 176 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 C10orf111Q8N326 155 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 ARIH2OSQ8N7S6 290 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 ZNF439Q8NDP4 499 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 ST6GALNAC3Q8NDV1 305 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 OR8G5Q8NG78 346 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 OR4P4Q8NGL7 312 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 OR5B3Q8NH48 314 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 ZNF420Q8TAQ5 688 aaPredicted RBP2.93□□□□□ -1.94
UBA3-204ENST00000461522 NEIL3Q8TAT5 605 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 GPR148Q8TDV2 347 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 GPR119Q8TDV5 335 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 GEMIN6Q8WXD5 167 aaKnown RBP2.93□□□□□ -1.94
UBA3-204ENST00000461522 MAL2Q969L2 176 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 SEH1LQ96EE3 360 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 OR2M2Q96R28 347 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 OR8B4Q96RC9 309 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 FOXC2Q99958 501 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 GINS3Q9BRX5 216 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 THTPAQ9BU02 230 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 MROQ9BYG7 248 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 TTTY12Q9BZ98 90 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 CHIAQ9BZP6 476 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 CXXC4Q9H2H0 198 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 RNF122Q9H9V4 155 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 DUX4Q9UBX2 424 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 Q9UF83 564 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 SS18L2Q9UHA2 77 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 PRO0628Q9UI54 55 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 POMPQ9Y244 141 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 ZNF443Q9Y2A4 671 aaPredicted RBP2.93□□□□□ -1.94
UBA3-204ENST00000461522 HDGFL3Q9Y3E1 203 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 LSM5Q9Y4Y9 91 aaKnown RBP2.93□□□□□ -1.94
UBA3-204ENST00000461522 ZFHX4Q86UP3 3567 aa2.93□□□□□ -1.94
UBA3-204ENST00000461522 ZFYVE26Q68DK2 2539 aa2.92□□□□□ -1.94
UBA3-204ENST00000461522 A0A087WUJ7 227 aa2.92□□□□□ -1.94
UBA3-204ENST00000461522 TRGV5A0A0B4J1U4 118 aa2.92□□□□□ -1.94
UBA3-204ENST00000461522 TEX48A0A1B0GUV7 120 aa2.92□□□□□ -1.94
UBA3-204ENST00000461522 TCRBV3S1A0A5B6 114 aa2.92□□□□□ -1.94
UBA3-204ENST00000461522 DAPL1A0PJW8 107 aa2.92□□□□□ -1.94
UBA3-204ENST00000461522 TRAPPC13A5PLN9 417 aa2.92□□□□□ -1.94
UBA3-204ENST00000461522 ARRDC5A6NEK1 342 aa2.92□□□□□ -1.94
UBA3-204ENST00000461522 DHRS7CA6NNS2 312 aa2.92□□□□□ -1.94
UBA3-204ENST00000461522 I3L521 148 aa2.92□□□□□ -1.94
UBA3-204ENST00000461522 K7EM74 188 aa2.92□□□□□ -1.94
UBA3-204ENST00000461522 EI24O14681 340 aa2.92□□□□□ -1.94
UBA3-204ENST00000461522 FABP7O15540 132 aa2.92□□□□□ -1.94
UBA3-204ENST00000461522 SOX15O60248 233 aa2.92□□□□□ -1.94
UBA3-204ENST00000461522 GGCTO75223 188 aaKnown RBP2.92□□□□□ -1.94
UBA3-204ENST00000461522 SLC22A5O76082 557 aa2.92□□□□□ -1.94
UBA3-204ENST00000461522 EPPINO95925 133 aa2.92□□□□□ -1.94
UBA3-204ENST00000461522 GCGP01275 180 aa2.92□□□□□ -1.94
UBA3-204ENST00000461522 C1QCP02747 245 aa2.92□□□□□ -1.94
UBA3-204ENST00000461522 SEMG1P04279 462 aa2.92□□□□□ -1.94
UBA3-204ENST00000461522 CSF3P09919 207 aa2.92□□□□□ -1.94
UBA3-204ENST00000461522 TRAPPC2P0DI81 140 aa2.92□□□□□ -1.94
UBA3-204ENST00000461522 TRAPPC2BP0DI82 140 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms