RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 GALR2O43603 387 aaPredicted RBP12.96□□□□□ -0.33
LMNB1-203ENST00000460265 SMIM21Q3B7S5 101 aa12.96□□□□□ -0.33
LMNB1-203ENST00000460265 BHLHA15Q7RTS1 189 aaPredicted RBP12.96□□□□□ -0.33
LMNB1-203ENST00000460265 H2BFWTQ7Z2G1 175 aa12.96□□□□□ -0.33
LMNB1-203ENST00000460265 MOGAT3Q86VF5 341 aa12.96□□□□□ -0.33
LMNB1-203ENST00000460265 WFDC8Q8IUA0 241 aa12.96□□□□□ -0.33
LMNB1-203ENST00000460265 PKIBQ9C010 78 aa12.96□□□□□ -0.33
LMNB1-203ENST00000460265 CTDSP1Q9GZU7 261 aa12.96□□□□□ -0.33
LMNB1-203ENST00000460265 ZDHHC11Q9H8X9 412 aa12.96□□□□□ -0.33
LMNB1-203ENST00000460265 PLSCR2Q9NRY7 297 aa12.96□□□□□ -0.33
LMNB1-203ENST00000460265 CHD8Q9HCK8 2581 aa12.96□□□□□ -0.33
LMNB1-203ENST00000460265 UBE2L5PA0A1B0GUS4 154 aa12.96□□□□□ -0.33
LMNB1-203ENST00000460265 ZNF891A8MT65 544 aaPredicted RBP12.96□□□□□ -0.33
LMNB1-203ENST00000460265 HBZP02008 142 aa12.96□□□□□ -0.33
LMNB1-203ENST00000460265 WDR86Q86TI4 376 aa12.96□□□□□ -0.33
LMNB1-203ENST00000460265 ZNF709Q8N972 641 aa12.96□□□□□ -0.33
LMNB1-203ENST00000460265 SMIM7Q9BQ49 75 aa12.96□□□□□ -0.33
LMNB1-203ENST00000460265 SDF2L1Q9HCN8 221 aa12.96□□□□□ -0.33
LMNB1-203ENST00000460265 GLRX2Q9NS18 164 aa12.96□□□□□ -0.33
LMNB1-203ENST00000460265 A0A0G2JRQ6 117 aa12.96□□□□□ -0.34
LMNB1-203ENST00000460265 ACOT6Q3I5F7 207 aaPredicted RBP12.96□□□□□ -0.34
LMNB1-203ENST00000460265 OR8G5Q8NG78 346 aa12.96□□□□□ -0.34
LMNB1-203ENST00000460265 CXXC4Q9H2H0 198 aa12.96□□□□□ -0.34
LMNB1-203ENST00000460265 PRR33A8MZF0 331 aa12.95□□□□□ -0.34
LMNB1-203ENST00000460265 IL6RP08887 468 aaPredicted RBP12.95□□□□□ -0.34
LMNB1-203ENST00000460265 COA6Q5JTJ3 125 aaKnown RBP12.95□□□□□ -0.34
LMNB1-203ENST00000460265 RPRMLQ8N4K4 120 aa12.95□□□□□ -0.34
LMNB1-203ENST00000460265 DRAM1Q8N682 238 aa12.95□□□□□ -0.34
LMNB1-203ENST00000460265 OR1L6Q8NGR2 347 aa12.95□□□□□ -0.34
LMNB1-203ENST00000460265 LEAP2Q969E1 77 aa12.95□□□□□ -0.34
LMNB1-203ENST00000460265 CIB3Q96Q77 187 aaPredicted RBP12.95□□□□□ -0.34
LMNB1-203ENST00000460265 VAMP8Q9BV40 100 aa12.95□□□□□ -0.34
LMNB1-203ENST00000460265 HBG1P69891 147 aa12.95□□□□□ -0.34
LMNB1-203ENST00000460265 HBG2P69892 147 aa12.95□□□□□ -0.34
LMNB1-203ENST00000460265 MSMO1Q15800 293 aa12.95□□□□□ -0.34
LMNB1-203ENST00000460265 Q6ZSR3 168 aa12.95□□□□□ -0.34
LMNB1-203ENST00000460265 FGFRL1Q8N441 504 aa12.95□□□□□ -0.34
LMNB1-203ENST00000460265 ZNRF1Q8ND25 227 aa12.95□□□□□ -0.34
LMNB1-203ENST00000460265 FAM122AQ96E09 287 aa12.95□□□□□ -0.34
LMNB1-203ENST00000460265 H0Y980 276 aa12.94□□□□□ -0.34
LMNB1-203ENST00000460265 UCP1P25874 307 aa12.94□□□□□ -0.34
LMNB1-203ENST00000460265 CNN1P51911 297 aaKnown RBP12.94□□□□□ -0.34
LMNB1-203ENST00000460265 FAM90A2PQ658T7 463 aa12.94□□□□□ -0.34
LMNB1-203ENST00000460265 ZNF665Q9H7R5 613 aa12.94□□□□□ -0.34
LMNB1-203ENST00000460265 CLN8Q9UBY8 286 aa12.94□□□□□ -0.34
LMNB1-203ENST00000460265 METRNQ9UJH8 293 aa12.94□□□□□ -0.34
LMNB1-203ENST00000460265 FCGR3BO75015 233 aa12.94□□□□□ -0.34
LMNB1-203ENST00000460265 GPR12P47775 334 aa12.94□□□□□ -0.34
LMNB1-203ENST00000460265 BAXQ07812 192 aa12.94□□□□□ -0.34
LMNB1-203ENST00000460265 PRSS8Q16651 343 aa12.94□□□□□ -0.34
LMNB1-203ENST00000460265 TDRG1Q3Y452 100 aa12.94□□□□□ -0.34
LMNB1-203ENST00000460265 SMIM15Q7Z3B0 74 aa12.94□□□□□ -0.34
LMNB1-203ENST00000460265 PPP1R35Q8TAP8 253 aa12.94□□□□□ -0.34
LMNB1-203ENST00000460265 TMEM170AQ8WVE7 144 aa12.94□□□□□ -0.34
LMNB1-203ENST00000460265 GNPNAT1Q96EK6 184 aaPredicted RBP12.94□□□□□ -0.34
LMNB1-203ENST00000460265 TAAR6Q96RI8 345 aa12.94□□□□□ -0.34
LMNB1-203ENST00000460265 LOC102723971A0A1B0GUV8 181 aa12.94□□□□□ -0.34
LMNB1-203ENST00000460265 RNF212BA8MTL3 300 aa12.94□□□□□ -0.34
LMNB1-203ENST00000460265 C12orf77C9JDV5 145 aa12.94□□□□□ -0.34
LMNB1-203ENST00000460265 FAM3BP58499 235 aaPredicted RBP12.94□□□□□ -0.34
LMNB1-203ENST00000460265 FOXC1Q12948 553 aa12.94□□□□□ -0.34
LMNB1-203ENST00000460265 PCSK4Q6UW60 755 aa12.94□□□□□ -0.34
LMNB1-203ENST00000460265 CISD2Q8N5K1 135 aaKnown RBP12.94□□□□□ -0.34
LMNB1-203ENST00000460265 SLC35E1Q96K37 410 aa12.94□□□□□ -0.34
LMNB1-203ENST00000460265 PATZ1Q9HBE1 687 aaKnown RBP12.94□□□□□ -0.34
LMNB1-203ENST00000460265 SPG11Q96JI7 2443 aa12.93□□□□□ -0.34
LMNB1-203ENST00000460265 CDKN1BP46527 198 aa12.93□□□□□ -0.34
LMNB1-203ENST00000460265 TMEM183BQ1AE95 376 aa12.93□□□□□ -0.34
LMNB1-203ENST00000460265 KRTAP27-1Q3LI81 207 aa12.93□□□□□ -0.34
LMNB1-203ENST00000460265 TMEM41BQ5BJD5 291 aa12.93□□□□□ -0.34
LMNB1-203ENST00000460265 ZNF787Q6DD87 383 aa12.93□□□□□ -0.34
LMNB1-203ENST00000460265 RPUSD4Q96CM3 377 aaKnown RBP12.93□□□□□ -0.34
LMNB1-203ENST00000460265 LYRM2Q9NU23 88 aaPredicted RBP12.93□□□□□ -0.34
LMNB1-203ENST00000460265 SLC39A9Q9NUM3 307 aa12.93□□□□□ -0.34
LMNB1-203ENST00000460265 TNRC6AQ8NDV7 1962 aaKnown RBP12.93□□□□□ -0.34
LMNB1-203ENST00000460265 MDH2P40926 338 aaKnown RBP12.93□□□□□ -0.34
LMNB1-203ENST00000460265 FAM27E3Q08E93 113 aa12.93□□□□□ -0.34
LMNB1-203ENST00000460265 MMDQ15546 238 aa12.93□□□□□ -0.34
LMNB1-203ENST00000460265 ZNF324BQ6AW86 544 aaPredicted RBP12.93□□□□□ -0.34
LMNB1-203ENST00000460265 Q6ZRM9 215 aa12.93□□□□□ -0.34
LMNB1-203ENST00000460265 H1FOOQ8IZA3 346 aaPredicted RBP12.93□□□□□ -0.34
LMNB1-203ENST00000460265 OR4D5Q8NGN0 318 aa12.93□□□□□ -0.34
LMNB1-203ENST00000460265 VN1R17PQ8TDU5 208 aa12.93□□□□□ -0.34
LMNB1-203ENST00000460265 TMEM171Q8WVE6 324 aa12.93□□□□□ -0.34
LMNB1-203ENST00000460265 RNF24Q9Y225 148 aa12.93□□□□□ -0.34
LMNB1-203ENST00000460265 LAMA5O15230 3695 aa12.93□□□□□ -0.34
LMNB1-203ENST00000460265 TNCP24821 2201 aa12.93□□□□□ -0.34
LMNB1-203ENST00000460265 M0R1X1 148 aa12.93□□□□□ -0.34
LMNB1-203ENST00000460265 CCL25O15444 150 aa12.93□□□□□ -0.34
LMNB1-203ENST00000460265 TMEM50AO95807 157 aa12.93□□□□□ -0.34
LMNB1-203ENST00000460265 GZMHP20718 246 aa12.93□□□□□ -0.34
LMNB1-203ENST00000460265 CLEC2AQ6UVW9 174 aa12.93□□□□□ -0.34
LMNB1-203ENST00000460265 DPPA3Q6W0C5 159 aa12.93□□□□□ -0.34
LMNB1-203ENST00000460265 TMEM256Q8N2U0 113 aa12.93□□□□□ -0.34
LMNB1-203ENST00000460265 OR5D13Q8NGL4 314 aa12.93□□□□□ -0.34
LMNB1-203ENST00000460265 HEYLQ9NQ87 328 aaPredicted RBP12.93□□□□□ -0.34
LMNB1-203ENST00000460265 DECR2Q9NUI1 292 aa12.93□□□□□ -0.34
LMNB1-203ENST00000460265 KIAA1549Q9HCM3 1950 aa12.92□□□□□ -0.34
LMNB1-203ENST00000460265 A0A1B0GUS0 222 aa12.92□□□□□ -0.34
LMNB1-203ENST00000460265 RAMP3O60896 148 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms