RNA–Protein interactions for RNA: ENST00000459625.5

HDAC7-217, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 6,414 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-217ENST00000459625 FAM74A3Q4VXF1 159 aa13.71□□□□□ -0.21
HDAC7-217ENST00000459625 TMEM183AQ8IXX5 376 aa13.71□□□□□ -0.21
HDAC7-217ENST00000459625 OR9G4Q8NGQ1 327 aa13.71□□□□□ -0.21
HDAC7-217ENST00000459625 SIGLEC12Q96PQ1 595 aa13.71□□□□□ -0.21
HDAC7-217ENST00000459625 TRGV4A0A0C4DH28 118 aa13.71□□□□□ -0.21
HDAC7-217ENST00000459625 TNFSF10P50591 281 aa13.71□□□□□ -0.21
HDAC7-217ENST00000459625 JOSD1Q15040 202 aaPredicted RBP13.71□□□□□ -0.21
HDAC7-217ENST00000459625 SURF2Q15527 256 aaPredicted RBP13.71□□□□□ -0.21
HDAC7-217ENST00000459625 PEMTQ9UBM1 199 aa13.71□□□□□ -0.21
HDAC7-217ENST00000459625 KLK2P20151 261 aa13.71□□□□□ -0.22
HDAC7-217ENST00000459625 OR1P1Q8NH06 330 aa13.71□□□□□ -0.22
HDAC7-217ENST00000459625 TMEM106BQ9NUM4 274 aa13.71□□□□□ -0.22
HDAC7-217ENST00000459625 A0A0U1RRA0 63 aa13.7□□□□□ -0.22
HDAC7-217ENST00000459625 PGLYRP1O75594 196 aaPredicted RBP13.7□□□□□ -0.22
HDAC7-217ENST00000459625 LEPROTL1O95214 131 aa13.7□□□□□ -0.22
HDAC7-217ENST00000459625 CNTFRP26992 372 aa13.7□□□□□ -0.22
HDAC7-217ENST00000459625 ASIPP42127 132 aa13.7□□□□□ -0.22
HDAC7-217ENST00000459625 NPBWR2P48146 333 aa13.7□□□□□ -0.22
HDAC7-217ENST00000459625 CYB5R1Q9UHQ9 305 aa13.7□□□□□ -0.22
HDAC7-217ENST00000459625 PLCH1Q4KWH8 1693 aa13.7□□□□□ -0.22
HDAC7-217ENST00000459625 LYNX1G3V0Z9 82 aa13.7□□□□□ -0.22
HDAC7-217ENST00000459625 LYNX1P0DP58 116 aa13.7□□□□□ -0.22
HDAC7-217ENST00000459625 RPS11P62280 158 aaKnown RBP eCLIP13.7□□□□□ -0.22
HDAC7-217ENST00000459625 FAM89BQ8N5H3 189 aa13.7□□□□□ -0.22
HDAC7-217ENST00000459625 IFNL4K9M1U5 179 aa13.7□□□□□ -0.22
HDAC7-217ENST00000459625 SNAI2O43623 268 aa13.7□□□□□ -0.22
HDAC7-217ENST00000459625 COX19Q49B96 90 aa13.7□□□□□ -0.22
HDAC7-217ENST00000459625 OR5AC2Q9NZP5 309 aa13.7□□□□□ -0.22
HDAC7-217ENST00000459625 DOCK2Q92608 1830 aa13.7□□□□□ -0.22
HDAC7-217ENST00000459625 ELOA3CA0A087WX78 387 aaPredicted RBP13.7□□□□□ -0.22
HDAC7-217ENST00000459625 GRIFINA4D1Z8 144 aa13.7□□□□□ -0.22
HDAC7-217ENST00000459625 TMEM42Q69YG0 159 aa13.7□□□□□ -0.22
HDAC7-217ENST00000459625 HOGA1Q86XE5 327 aa13.7□□□□□ -0.22
HDAC7-217ENST00000459625 SSC4DQ8WTU2 575 aa13.7□□□□□ -0.22
HDAC7-217ENST00000459625 CDK2AP2O75956 126 aa13.69□□□□□ -0.22
HDAC7-217ENST00000459625 NDUFA3O95167 84 aa13.69□□□□□ -0.22
HDAC7-217ENST00000459625 CD33P20138 364 aa13.69□□□□□ -0.22
HDAC7-217ENST00000459625 GPR146Q96CH1 333 aa13.69□□□□□ -0.22
HDAC7-217ENST00000459625 MRPL18Q9H0U6 180 aaKnown RBP13.69□□□□□ -0.22
HDAC7-217ENST00000459625 AHDC1Q5TGY3 1603 aaPredicted RBP13.69□□□□□ -0.22
HDAC7-217ENST00000459625 SAP30O75446 220 aa13.69□□□□□ -0.22
HDAC7-217ENST00000459625 RPL35AP18077 110 aaKnown RBP13.69□□□□□ -0.22
HDAC7-217ENST00000459625 COTL1Q14019 142 aa13.69□□□□□ -0.22
HDAC7-217ENST00000459625 ELOVL5Q9NYP7 299 aa13.69□□□□□ -0.22
HDAC7-217ENST00000459625 MAST2Q6P0Q8 1798 aa13.69□□□□□ -0.22
HDAC7-217ENST00000459625 TRAV21A0A0B4J279 112 aa13.68□□□□□ -0.22
HDAC7-217ENST00000459625 RRHO14718 337 aa13.68□□□□□ -0.22
HDAC7-217ENST00000459625 C1QL1O75973 258 aa13.68□□□□□ -0.22
HDAC7-217ENST00000459625 SCAND1P57086 179 aa13.68□□□□□ -0.22
HDAC7-217ENST00000459625 NANOS3P60323 173 aaKnown RBP13.68□□□□□ -0.22
HDAC7-217ENST00000459625 BHLHA9Q7RTU4 235 aa13.68□□□□□ -0.22
HDAC7-217ENST00000459625 TIAF1O95411 115 aa13.68□□□□□ -0.22
HDAC7-217ENST00000459625 ZNF506Q5JVG8 444 aa13.68□□□□□ -0.22
HDAC7-217ENST00000459625 KCNK7Q9Y2U2 307 aa13.68□□□□□ -0.22
HDAC7-217ENST00000459625 CCDC88CQ9P219 2028 aa13.68□□□□□ -0.22
HDAC7-217ENST00000459625 MARCH11A6NNE9 402 aa13.68□□□□□ -0.22
HDAC7-217ENST00000459625 PTP4A3O75365 173 aa13.68□□□□□ -0.22
HDAC7-217ENST00000459625 FGF5P12034 268 aa13.68□□□□□ -0.22
HDAC7-217ENST00000459625 TMEM136Q6ZRR5 245 aa13.68□□□□□ -0.22
HDAC7-217ENST00000459625 Q71RC1 249 aaPredicted RBP13.68□□□□□ -0.22
HDAC7-217ENST00000459625 IFT22Q9H7X7 185 aa13.68□□□□□ -0.22
HDAC7-217ENST00000459625 CDS2O95674 445 aa13.68□□□□□ -0.22
HDAC7-217ENST00000459625 ZNF688P0C7X2 276 aa13.68□□□□□ -0.22
HDAC7-217ENST00000459625 MMP16P51512 607 aa13.68□□□□□ -0.22
HDAC7-217ENST00000459625 C10orf126Q8N4M7 172 aa13.68□□□□□ -0.22
HDAC7-217ENST00000459625 PRELID3AQ96N28 172 aa13.68□□□□□ -0.22
HDAC7-217ENST00000459625 ZNF703Q9H7S9 590 aaPredicted RBP13.68□□□□□ -0.22
HDAC7-217ENST00000459625 TDGF1P3P51864 188 aa13.67□□□□□ -0.22
HDAC7-217ENST00000459625 RPS20P60866 119 aaKnown RBP13.67□□□□□ -0.22
HDAC7-217ENST00000459625 OR11H7Q8NGC8 314 aa13.67□□□□□ -0.22
HDAC7-217ENST00000459625 CDC42EP3Q9UKI2 254 aa13.67□□□□□ -0.22
HDAC7-217ENST00000459625 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.67□□□□□ -0.22
HDAC7-217ENST00000459625 APC2O95996 2303 aa13.67□□□□□ -0.22
HDAC7-217ENST00000459625 H0Y980 276 aa13.67□□□□□ -0.22
HDAC7-217ENST00000459625 CD160O95971 181 aa13.67□□□□□ -0.22
HDAC7-217ENST00000459625 CD7P09564 240 aa13.67□□□□□ -0.22
HDAC7-217ENST00000459625 ST6GALNAC3Q8NDV1 305 aa13.67□□□□□ -0.22
HDAC7-217ENST00000459625 EGR1P18146 543 aa13.67□□□□□ -0.22
HDAC7-217ENST00000459625 TMEM186Q96B77 213 aa13.67□□□□□ -0.22
HDAC7-217ENST00000459625 ZCCHC24Q8N2G6 241 aaKnown RBP13.67□□□□□ -0.22
HDAC7-217ENST00000459625 SMCHD1A6NHR9 2005 aa13.67□□□□□ -0.22
HDAC7-217ENST00000459625 A0A1W2PQM1 296 aa13.67□□□□□ -0.22
HDAC7-217ENST00000459625 SRIP30626 198 aa13.67□□□□□ -0.22
HDAC7-217ENST00000459625 CD300LDQ6UXZ3 194 aa13.66□□□□□ -0.22
HDAC7-217ENST00000459625 FAM216BQ8N7L0 139 aa13.66□□□□□ -0.22
HDAC7-217ENST00000459625 ARPC1AQ92747 370 aa13.66□□□□□ -0.22
HDAC7-217ENST00000459625 JMJD8Q96S16 334 aa13.66□□□□□ -0.22
HDAC7-217ENST00000459625 NPIPB4C9JG80 1138 aa13.66□□□□□ -0.22
HDAC7-217ENST00000459625 GGCTO75223 188 aaKnown RBP13.66□□□□□ -0.22
HDAC7-217ENST00000459625 HSPE1P61604 102 aaKnown RBP13.66□□□□□ -0.22
HDAC7-217ENST00000459625 TCF24Q7RTU0 167 aa13.66□□□□□ -0.22
HDAC7-217ENST00000459625 CLDND2Q8NHS1 167 aa13.66□□□□□ -0.22
HDAC7-217ENST00000459625 RBMY1BA6NDE4 496 aaKnown RBP13.66□□□□□ -0.22
HDAC7-217ENST00000459625 RBMY1EA6NEQ0 496 aaKnown RBP13.66□□□□□ -0.22
HDAC7-217ENST00000459625 SOD3P08294 240 aa13.66□□□□□ -0.22
HDAC7-217ENST00000459625 RBMY1DP0C7P1 496 aaKnown RBP13.66□□□□□ -0.22
HDAC7-217ENST00000459625 RBMY1A1P0DJD3 496 aaKnown RBP13.66□□□□□ -0.22
HDAC7-217ENST00000459625 RBMY1CP0DJD4 496 aa13.66□□□□□ -0.22
HDAC7-217ENST00000459625 C8orf88P0DMB2 117 aa13.66□□□□□ -0.22
HDAC7-217ENST00000459625 BCL2P10415 239 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms