RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 BORCS8Q96FH0 119 aa8.16□□□□□ -1.1
LINC01940-201ENST00000455228 SPIN2AQ99865 258 aa8.16□□□□□ -1.1
LINC01940-201ENST00000455228 SPIN2BQ9BPZ2 258 aa8.16□□□□□ -1.1
LINC01940-201ENST00000455228 LAMP3Q9UQV4 416 aa8.16□□□□□ -1.1
LINC01940-201ENST00000455228 ADAMTS9Q9P2N4 1935 aa8.16□□□□□ -1.1
LINC01940-201ENST00000455228 WDR87Q6ZQQ6 2873 aa8.15□□□□□ -1.1
LINC01940-201ENST00000455228 TRAV9-2A0A087WT02 112 aa8.15□□□□□ -1.1
LINC01940-201ENST00000455228 C9orf118A6NHY6 69 aa8.15□□□□□ -1.1
LINC01940-201ENST00000455228 H3BMH7 237 aa8.15□□□□□ -1.1
LINC01940-201ENST00000455228 SSSCA1O60232 199 aa8.15□□□□□ -1.1
LINC01940-201ENST00000455228 ZNF253O75346 499 aa8.15□□□□□ -1.1
LINC01940-201ENST00000455228 HBE1P02100 147 aa8.15□□□□□ -1.1
LINC01940-201ENST00000455228 GALR1P47211 349 aa8.15□□□□□ -1.1
LINC01940-201ENST00000455228 PRSS12P56730 875 aa8.15□□□□□ -1.1
LINC01940-201ENST00000455228 ERVK11-1P61568 191 aa8.15□□□□□ -1.1
LINC01940-201ENST00000455228 SEC11AP67812 179 aa8.15□□□□□ -1.1
LINC01940-201ENST00000455228 MRPS34P82930 218 aaKnown RBP8.15□□□□□ -1.1
LINC01940-201ENST00000455228 C16orf82Q7Z2V1 217 aa8.15□□□□□ -1.1
LINC01940-201ENST00000455228 ZNF442Q9H7R0 627 aa8.15□□□□□ -1.1
LINC01940-201ENST00000455228 IL36GQ9NZH8 169 aa8.15□□□□□ -1.1
LINC01940-201ENST00000455228 HSPB8Q9UJY1 196 aa8.15□□□□□ -1.1
LINC01940-201ENST00000455228 H3BRM9 83 aa8.15□□□□□ -1.1
LINC01940-201ENST00000455228 CST7O76096 145 aa8.15□□□□□ -1.1
LINC01940-201ENST00000455228 DLX2Q07687 328 aaPredicted RBP8.15□□□□□ -1.1
LINC01940-201ENST00000455228 EIF3IQ13347 325 aaKnown RBP8.15□□□□□ -1.1
LINC01940-201ENST00000455228 POU2AF1Q16633 256 aa8.15□□□□□ -1.1
LINC01940-201ENST00000455228 ZNF611Q8N823 705 aa8.15□□□□□ -1.1
LINC01940-201ENST00000455228 OR2T10Q8NGZ9 312 aa8.15□□□□□ -1.1
LINC01940-201ENST00000455228 OR2AE1Q8NHA4 323 aa8.15□□□□□ -1.1
LINC01940-201ENST00000455228 RNF183Q96D59 192 aa8.15□□□□□ -1.1
LINC01940-201ENST00000455228 C18orf12Q96KH6 178 aa8.15□□□□□ -1.1
LINC01940-201ENST00000455228 NDFIP1Q9BT67 221 aa8.15□□□□□ -1.1
LINC01940-201ENST00000455228 ST20Q9HBF5 79 aa8.15□□□□□ -1.1
LINC01940-201ENST00000455228 NAT8BQ9UHF3 227 aa8.15□□□□□ -1.1
LINC01940-201ENST00000455228 IGHV1OR21-1A0A087WYE8 117 aa8.15□□□□□ -1.11
LINC01940-201ENST00000455228 GAGE10A6NGK3 116 aa8.15□□□□□ -1.11
LINC01940-201ENST00000455228 LMO7DNF2Z398 122 aa8.15□□□□□ -1.11
LINC01940-201ENST00000455228 GATA4P43694 442 aa8.15□□□□□ -1.11
LINC01940-201ENST00000455228 LY6DQ14210 128 aa8.15□□□□□ -1.11
LINC01940-201ENST00000455228 PDCD1Q15116 288 aa8.15□□□□□ -1.11
LINC01940-201ENST00000455228 ANKRD37Q7Z713 158 aa8.15□□□□□ -1.11
LINC01940-201ENST00000455228 FBXL14Q8N1E6 418 aa8.15□□□□□ -1.11
LINC01940-201ENST00000455228 OR5C1Q8NGR4 320 aa8.15□□□□□ -1.11
LINC01940-201ENST00000455228 MSI2Q96DH6 328 aaKnown RBP8.15□□□□□ -1.11
LINC01940-201ENST00000455228 SZT2Q5T011 3432 aa8.14□□□□□ -1.11
LINC01940-201ENST00000455228 SPEGQ15772 3267 aa8.14□□□□□ -1.11
LINC01940-201ENST00000455228 CENPVL3A0A0U1RRI6 287 aa8.14□□□□□ -1.11
LINC01940-201ENST00000455228 CD300LBA8K4G0 201 aa8.14□□□□□ -1.11
LINC01940-201ENST00000455228 CRXO43186 299 aaPredicted RBP8.14□□□□□ -1.11
LINC01940-201ENST00000455228 AMTP48728 403 aa8.14□□□□□ -1.11
LINC01940-201ENST00000455228 CRIP3Q6Q6R5 217 aa8.14□□□□□ -1.11
LINC01940-201ENST00000455228 LRTM2Q8N967 370 aa8.14□□□□□ -1.11
LINC01940-201ENST00000455228 TSTD1Q8NFU3 115 aa8.14□□□□□ -1.11
LINC01940-201ENST00000455228 PRR7Q8TB68 274 aa8.14□□□□□ -1.11
LINC01940-201ENST00000455228 TMEM37Q8WXS4 190 aa8.14□□□□□ -1.11
LINC01940-201ENST00000455228 NEUROG1Q92886 237 aa8.14□□□□□ -1.11
LINC01940-201ENST00000455228 PLEKHF2Q9H8W4 249 aa8.14□□□□□ -1.11
LINC01940-201ENST00000455228 LOC102724200A0A096LPH7 203 aaPredicted RBP8.14□□□□□ -1.11
LINC01940-201ENST00000455228 C3orf85A0A1B0GTC6 90 aa8.14□□□□□ -1.11
LINC01940-201ENST00000455228 EPOPA6NHQ4 379 aa8.14□□□□□ -1.11
LINC01940-201ENST00000455228 NXPH3O95157 252 aa8.14□□□□□ -1.11
LINC01940-201ENST00000455228 VENTXO95231 258 aa8.14□□□□□ -1.11
LINC01940-201ENST00000455228 MYF5P13349 255 aa8.14□□□□□ -1.11
LINC01940-201ENST00000455228 MALLQ13021 153 aa8.14□□□□□ -1.11
LINC01940-201ENST00000455228 TBR1Q16650 682 aa8.14□□□□□ -1.11
LINC01940-201ENST00000455228 ALKBH6Q3KRA9 238 aa8.14□□□□□ -1.11
LINC01940-201ENST00000455228 PIGYQ3MUY2 71 aa8.14□□□□□ -1.11
LINC01940-201ENST00000455228 TMEM78Q5T7P6 136 aa8.14□□□□□ -1.11
LINC01940-201ENST00000455228 FAM180AQ6UWF9 173 aa8.14□□□□□ -1.11
LINC01940-201ENST00000455228 SMIM20Q8N5G0 67 aa8.14□□□□□ -1.11
LINC01940-201ENST00000455228 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.14□□□□□ -1.11
LINC01940-201ENST00000455228 IGHV3-15A0A0B4J1V0 119 aa8.13□□□□□ -1.11
LINC01940-201ENST00000455228 ZFAND5O76080 213 aa8.13□□□□□ -1.11
LINC01940-201ENST00000455228 USF1P22415 310 aaPredicted RBP8.13□□□□□ -1.11
LINC01940-201ENST00000455228 OR10V1Q8NGI7 309 aa8.13□□□□□ -1.11
LINC01940-201ENST00000455228 C10orf35Q96D05 121 aa8.13□□□□□ -1.11
LINC01940-201ENST00000455228 GNPNAT1Q96EK6 184 aaPredicted RBP8.13□□□□□ -1.11
LINC01940-201ENST00000455228 LINC00312Q9Y6C7 94 aa8.13□□□□□ -1.11
LINC01940-201ENST00000455228 hADV38S2A0JD32 116 aa8.13□□□□□ -1.11
LINC01940-201ENST00000455228 LRP5LA4QPB2 252 aa8.13□□□□□ -1.11
LINC01940-201ENST00000455228 OR7C1O76099 320 aaPredicted RBP8.13□□□□□ -1.11
LINC01940-201ENST00000455228 NHLRC4P0CG21 123 aaPredicted RBP8.13□□□□□ -1.11
LINC01940-201ENST00000455228 CD33P20138 364 aa8.13□□□□□ -1.11
LINC01940-201ENST00000455228 CD27P26842 260 aa8.13□□□□□ -1.11
LINC01940-201ENST00000455228 FOXG1P55316 489 aaPredicted RBP8.13□□□□□ -1.11
LINC01940-201ENST00000455228 EFNB3Q15768 340 aa8.13□□□□□ -1.11
LINC01940-201ENST00000455228 OR10J3Q5JRS4 329 aa8.13□□□□□ -1.11
LINC01940-201ENST00000455228 OSR2Q8N2R0 312 aa8.13□□□□□ -1.11
LINC01940-201ENST00000455228 ULBP2Q9BZM5 246 aa8.13□□□□□ -1.11
LINC01940-201ENST00000455228 COMMD5Q9GZQ3 224 aa8.13□□□□□ -1.11
LINC01940-201ENST00000455228 TRAV34A0A0B4J273 112 aa8.13□□□□□ -1.11
LINC01940-201ENST00000455228 KIAA1324LA8MWY0 1029 aaPredicted RBP8.13□□□□□ -1.11
LINC01940-201ENST00000455228 DHHO43323 396 aa8.13□□□□□ -1.11
LINC01940-201ENST00000455228 PITX3O75364 302 aa8.13□□□□□ -1.11
LINC01940-201ENST00000455228 MDKP21741 143 aaPredicted RBP8.13□□□□□ -1.11
LINC01940-201ENST00000455228 TMEM252Q8N6L7 170 aa8.13□□□□□ -1.11
LINC01940-201ENST00000455228 MBD3L1Q8WWY6 194 aa8.13□□□□□ -1.11
LINC01940-201ENST00000455228 DEFB126Q9BYW3 111 aa8.13□□□□□ -1.11
LINC01940-201ENST00000455228 STRADBQ9C0K7 418 aa8.13□□□□□ -1.11
LINC01940-201ENST00000455228 DYNLT3P51808 116 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms