RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 TMEM108Q6UXF1 575 aa9.99□□□□□ -0.81
SMPD4-213ENST00000454468 PIP4P1Q86T03 277 aa9.99□□□□□ -0.81
SMPD4-213ENST00000454468 CABLES2Q9BTV7 478 aa9.99□□□□□ -0.81
SMPD4-213ENST00000454468 PLSCR4Q9NRQ2 329 aa9.99□□□□□ -0.81
SMPD4-213ENST00000454468 CALYQ9NYX4 217 aa9.99□□□□□ -0.81
SMPD4-213ENST00000454468 RNF7Q9UBF6 113 aa9.99□□□□□ -0.81
SMPD4-213ENST00000454468 DMRT1Q9Y5R6 373 aa9.99□□□□□ -0.81
SMPD4-213ENST00000454468 IGKV1D-17A0A075B6S4 117 aa9.98□□□□□ -0.81
SMPD4-213ENST00000454468 A0A1W2PPQ1 181 aa9.98□□□□□ -0.81
SMPD4-213ENST00000454468 COX5AP20674 150 aa9.98□□□□□ -0.81
SMPD4-213ENST00000454468 ERVK11-1P61568 191 aa9.98□□□□□ -0.81
SMPD4-213ENST00000454468 C11orf53Q8IXP5 236 aa9.98□□□□□ -0.81
SMPD4-213ENST00000454468 Q8NFD4 153 aa9.98□□□□□ -0.81
SMPD4-213ENST00000454468 OR10D4PQ8NGN7 298 aa9.98□□□□□ -0.81
SMPD4-213ENST00000454468 FAM122AQ96E09 287 aa9.98□□□□□ -0.81
SMPD4-213ENST00000454468 LRFN3Q9BTN0 628 aa9.98□□□□□ -0.81
SMPD4-213ENST00000454468 RNF115Q9Y4L5 304 aa9.98□□□□□ -0.81
SMPD4-213ENST00000454468 CHD3Q12873 2000 aaKnown RBP9.98□□□□□ -0.81
SMPD4-213ENST00000454468 MGST3O14880 152 aa9.98□□□□□ -0.81
SMPD4-213ENST00000454468 CHRNA7P36544 502 aa9.98□□□□□ -0.81
SMPD4-213ENST00000454468 MAJINQ3KP22 176 aa9.98□□□□□ -0.81
SMPD4-213ENST00000454468 FRZBQ92765 325 aa9.98□□□□□ -0.81
SMPD4-213ENST00000454468 GGACTQ9BVM4 153 aa9.98□□□□□ -0.81
SMPD4-213ENST00000454468 UTF1Q5T230 341 aa9.98□□□□□ -0.81
SMPD4-213ENST00000454468 C22orf34Q6ZV56 151 aa9.98□□□□□ -0.81
SMPD4-213ENST00000454468 OR5B12Q96R08 314 aa9.98□□□□□ -0.81
SMPD4-213ENST00000454468 SLC25A15Q9Y619 301 aa9.98□□□□□ -0.81
SMPD4-213ENST00000454468 COLCA2A8K830 154 aa9.97□□□□□ -0.81
SMPD4-213ENST00000454468 C16orf97H3BN30 126 aa9.97□□□□□ -0.81
SMPD4-213ENST00000454468 SRP19P09132 144 aaKnown RBP9.97□□□□□ -0.81
SMPD4-213ENST00000454468 OR4A8P0C604 315 aa9.97□□□□□ -0.81
SMPD4-213ENST00000454468 OR9G9P0C7N8 305 aa9.97□□□□□ -0.81
SMPD4-213ENST00000454468 ZNF25P17030 456 aaPredicted RBP9.97□□□□□ -0.81
SMPD4-213ENST00000454468 ZNF561Q8N587 486 aa9.97□□□□□ -0.81
SMPD4-213ENST00000454468 IL22RA2Q969J5 263 aa9.97□□□□□ -0.81
SMPD4-213ENST00000454468 LSM10Q969L4 123 aaKnown RBP9.97□□□□□ -0.81
SMPD4-213ENST00000454468 ACTR3CQ9C0K3 210 aaPredicted RBP9.97□□□□□ -0.81
SMPD4-213ENST00000454468 WDR61Q9GZS3 305 aaKnown RBP9.97□□□□□ -0.81
SMPD4-213ENST00000454468 A0A1W2PRD5 423 aa9.97□□□□□ -0.81
SMPD4-213ENST00000454468 A0A1W2PRF3 423 aa9.97□□□□□ -0.81
SMPD4-213ENST00000454468 A0A1W2PRM7 423 aa9.97□□□□□ -0.81
SMPD4-213ENST00000454468 VSTM5A8MXK1 200 aa9.97□□□□□ -0.81
SMPD4-213ENST00000454468 PHOX2AO14813 284 aa9.97□□□□□ -0.81
SMPD4-213ENST00000454468 TM4SF5O14894 197 aa9.97□□□□□ -0.81
SMPD4-213ENST00000454468 DLX1P56177 255 aa9.97□□□□□ -0.81
SMPD4-213ENST00000454468 ICAM4Q14773 271 aa9.97□□□□□ -0.81
SMPD4-213ENST00000454468 SPSB3Q6PJ21 355 aa9.97□□□□□ -0.81
SMPD4-213ENST00000454468 C15orf54Q8N8G6 183 aa9.97□□□□□ -0.81
SMPD4-213ENST00000454468 OR10X1Q8NGY0 326 aa9.97□□□□□ -0.81
SMPD4-213ENST00000454468 TMEM147Q9BVK8 224 aa9.97□□□□□ -0.81
SMPD4-213ENST00000454468 SAP30LQ9HAJ7 183 aa9.97□□□□□ -0.81
SMPD4-213ENST00000454468 BCL2P10415 239 aa9.96□□□□□ -0.81
SMPD4-213ENST00000454468 CCL3L1P16619 93 aa9.96□□□□□ -0.81
SMPD4-213ENST00000454468 HABP2Q14520 560 aaPredicted RBP9.96□□□□□ -0.81
SMPD4-213ENST00000454468 MIC13Q5XKP0 118 aa9.96□□□□□ -0.81
SMPD4-213ENST00000454468 SEM1Q6ZVN7 128 aa9.96□□□□□ -0.81
SMPD4-213ENST00000454468 RAB24Q969Q5 203 aa9.96□□□□□ -0.81
SMPD4-213ENST00000454468 ACY3Q96HD9 319 aa9.96□□□□□ -0.81
SMPD4-213ENST00000454468 C14orf144Q96I85 54 aa9.96□□□□□ -0.81
SMPD4-213ENST00000454468 HSD17B10Q99714 261 aaKnown RBP9.96□□□□□ -0.81
SMPD4-213ENST00000454468 C17orf112F2Z3M2 114 aa9.96□□□□□ -0.81
SMPD4-213ENST00000454468 LYNX1G3V0Z9 82 aa9.96□□□□□ -0.81
SMPD4-213ENST00000454468 HSPB1P04792 205 aaKnown RBP9.96□□□□□ -0.81
SMPD4-213ENST00000454468 LYNX1P0DP58 116 aa9.96□□□□□ -0.81
SMPD4-213ENST00000454468 RPS23P62266 143 aaKnown RBP9.96□□□□□ -0.81
SMPD4-213ENST00000454468 RTP5Q14D33 572 aa9.96□□□□□ -0.81
SMPD4-213ENST00000454468 OR6C3Q9NZP0 311 aa9.96□□□□□ -0.81
SMPD4-213ENST00000454468 FAM215AQ9Y5M1 114 aa9.96□□□□□ -0.81
SMPD4-213ENST00000454468 IGHV3-21A0A0B4J1V1 117 aa9.96□□□□□ -0.82
SMPD4-213ENST00000454468 IGLV2-14P01704 120 aa9.96□□□□□ -0.82
SMPD4-213ENST00000454468 CD40P25942 277 aa9.96□□□□□ -0.82
SMPD4-213ENST00000454468 GLRXP35754 106 aa9.96□□□□□ -0.82
SMPD4-213ENST00000454468 TIMM23BQ5SRD1 257 aa9.96□□□□□ -0.82
SMPD4-213ENST00000454468 Q6ZS49 121 aa9.96□□□□□ -0.82
SMPD4-213ENST00000454468 SSX7Q7RTT5 188 aa9.96□□□□□ -0.82
SMPD4-213ENST00000454468 HAPLN4Q86UW8 402 aa9.96□□□□□ -0.82
SMPD4-213ENST00000454468 CIB3Q96Q77 187 aaPredicted RBP9.96□□□□□ -0.82
SMPD4-213ENST00000454468 TMEM140Q9NV12 185 aa9.96□□□□□ -0.82
SMPD4-213ENST00000454468 DOK5Q9P104 306 aa9.96□□□□□ -0.82
SMPD4-213ENST00000454468 LAMP3Q9UQV4 416 aa9.96□□□□□ -0.82
SMPD4-213ENST00000454468 MAP1AP78559 2803 aaPredicted RBP9.96□□□□□ -0.82
SMPD4-213ENST00000454468 ADH4P08319 380 aa9.95□□□□□ -0.82
SMPD4-213ENST00000454468 CDC34P49427 236 aaPredicted RBP9.95□□□□□ -0.82
SMPD4-213ENST00000454468 BPIFB3P59826 476 aa9.95□□□□□ -0.82
SMPD4-213ENST00000454468 RPL31P62899 125 aaKnown RBP9.95□□□□□ -0.82
SMPD4-213ENST00000454468 TMEM41BQ5BJD5 291 aa9.95□□□□□ -0.82
SMPD4-213ENST00000454468 FAM90A1Q86YD7 464 aa9.95□□□□□ -0.82
SMPD4-213ENST00000454468 CLDND2Q8NHS1 167 aa9.95□□□□□ -0.82
SMPD4-213ENST00000454468 SNX22Q96L94 193 aa9.95□□□□□ -0.82
SMPD4-213ENST00000454468 SCNM1Q9BWG6 230 aa9.95□□□□□ -0.82
SMPD4-213ENST00000454468 MBNL3Q9NUK0 354 aaKnown RBP9.95□□□□□ -0.82
SMPD4-213ENST00000454468 ZNF705GA8MUZ8 300 aaPredicted RBP9.95□□□□□ -0.82
SMPD4-213ENST00000454468 CEACAM1P13688 526 aa9.95□□□□□ -0.82
SMPD4-213ENST00000454468 MORN2Q502X0 79 aa9.95□□□□□ -0.82
SMPD4-213ENST00000454468 ACSM6Q6P461 480 aa9.95□□□□□ -0.82
SMPD4-213ENST00000454468 OR51G1Q8NGK1 321 aa9.95□□□□□ -0.82
SMPD4-213ENST00000454468 H7BYZ3 331 aa9.95□□□□□ -0.82
SMPD4-213ENST00000454468 TRGC2P03986 189 aa9.95□□□□□ -0.82
SMPD4-213ENST00000454468 CD1BP29016 333 aa9.95□□□□□ -0.82
SMPD4-213ENST00000454468 GNB1P62873 340 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms