RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 MARCH3Q86UD3 253 aa3.28□□□□□ -1.88
HMGB3P21-201ENST00000452483 MKXQ8IYA7 352 aa3.28□□□□□ -1.88
HMGB3P21-201ENST00000452483 C1orf174Q8IYL3 243 aa3.28□□□□□ -1.88
HMGB3P21-201ENST00000452483 C12orf45Q8N5I9 185 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P21-201ENST00000452483 Q8NBF4 154 aa3.28□□□□□ -1.88
HMGB3P21-201ENST00000452483 OR51T1Q8NGJ9 327 aa3.28□□□□□ -1.88
HMGB3P21-201ENST00000452483 TERB2Q8NHR7 220 aa3.28□□□□□ -1.88
HMGB3P21-201ENST00000452483 OR2A5Q96R48 311 aa3.28□□□□□ -1.88
HMGB3P21-201ENST00000452483 CCL13Q99616 98 aa3.28□□□□□ -1.88
HMGB3P21-201ENST00000452483 PRADC1Q9BSG0 188 aa3.28□□□□□ -1.88
HMGB3P21-201ENST00000452483 IMUPQ9GZP8 106 aa3.28□□□□□ -1.88
HMGB3P21-201ENST00000452483 C11orf68Q9H3H3 251 aaKnown RBP3.28□□□□□ -1.88
HMGB3P21-201ENST00000452483 TAF9BQ9HBM6 251 aa3.28□□□□□ -1.88
HMGB3P21-201ENST00000452483 NUFIP1Q9UHK0 495 aaKnown RBP3.28□□□□□ -1.88
HMGB3P21-201ENST00000452483 PCTPQ9UKL6 214 aa3.28□□□□□ -1.88
HMGB3P21-201ENST00000452483 TNFSF18Q9UNG2 199 aa3.28□□□□□ -1.88
HMGB3P21-201ENST00000452483 SCN10AQ9Y5Y9 1956 aa3.28□□□□□ -1.88
HMGB3P21-201ENST00000452483 RB1CC1Q8TDY2 1594 aa3.28□□□□□ -1.88
HMGB3P21-201ENST00000452483 DOCK5Q9H7D0 1870 aa3.28□□□□□ -1.88
HMGB3P21-201ENST00000452483 OVOS2A0A0G2JMS6 1433 aa3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 TECPR2O15040 1411 aa3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 TNS3Q68CZ2 1445 aa3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 ERBINQ96RT1 1412 aa3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 PDS5BQ9NTI5 1447 aa3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 NALCNQ8IZF0 1738 aa3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 THSD7BQ9C0I4 1608 aa3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 TRBV20OR9-2A0A075B6H5 130 aa3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 TRAV9-1A0A075B6T8 112 aa3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 IGHV3-35A0A0C4DH35 117 aa3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 CORTO00230 105 aa3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 COX7A2LO14548 114 aa3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 OVOL1O14753 267 aa3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 OR7C2O60412 319 aa3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 DPM2O94777 84 aa3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 NRASP01111 189 aa3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 OPN1SWP03999 348 aa3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 SMIM10L2AP0DMW4 78 aa3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 SMIM10L2BP0DMW5 78 aa3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 PKIAP61925 76 aa3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 FKBP1AP62942 108 aaKnown RBP3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 HBA1P69905 142 aa3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 SLC38A11Q08AI6 406 aa3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 RSPO1Q2MKA7 263 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 CASC10Q5T4H9 136 aa3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 MRPL2Q5T653 305 aaKnown RBP3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 WDR59Q6PJI9 974 aa3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 CEMP1Q6PRD7 247 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 UNQ9165/PRO28630Q6UXU0 137 aa3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 ZNF429Q86V71 674 aa3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 LRP11Q86VZ4 500 aa3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 PDPNQ86YL7 162 aa3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 C8orf59Q8N0T1 100 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 SLC22A24Q8N4F4 322 aa3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 ZNF709Q8N972 641 aa3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 OR5H2Q8NGV7 314 aa3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 C18orf15Q96N68 181 aa3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 ERMAPQ96PL5 475 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 WDR61Q9GZS3 305 aaKnown RBP3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 LINC00597Q9H2U6 94 aa3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 C6orf106Q9H6K1 298 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 ZNF696Q9H7X3 374 aa3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 TAAR3PQ9P1P4 343 aa3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 DEC1Q9P2X7 70 aa3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 TAC3Q9UHF0 121 aa3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 AK3Q9UIJ7 227 aa3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 MIA3Q5JRA6 1907 aa3.27□□□□□ -1.89
HMGB3P21-201ENST00000452483 XIRP1Q702N8 1843 aaKnown RBP3.26□□□□□ -1.89
HMGB3P21-201ENST00000452483 IGKV6D-21A0A0A0MT36 114 aa3.26□□□□□ -1.89
HMGB3P21-201ENST00000452483 TRDV1A0A1B0GX56 115 aa3.26□□□□□ -1.89
HMGB3P21-201ENST00000452483 TMEM72A0PK05 275 aa3.26□□□□□ -1.89
HMGB3P21-201ENST00000452483 DPRXA6NFQ7 191 aa3.26□□□□□ -1.89
HMGB3P21-201ENST00000452483 IFNA17P01571 189 aa3.26□□□□□ -1.89
HMGB3P21-201ENST00000452483 IGLV2-8P01709 118 aa3.26□□□□□ -1.89
HMGB3P21-201ENST00000452483 UCHL1P09936 223 aa3.26□□□□□ -1.89
HMGB3P21-201ENST00000452483 MUC1P15941 1255 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P21-201ENST00000452483 OPRK1P41145 380 aa3.26□□□□□ -1.89
HMGB3P21-201ENST00000452483 LINC00313P59037 77 aa3.26□□□□□ -1.89
HMGB3P21-201ENST00000452483 COPZ1P61923 177 aa3.26□□□□□ -1.89
HMGB3P21-201ENST00000452483 ENDOGQ14249 297 aaKnown RBP3.26□□□□□ -1.89
HMGB3P21-201ENST00000452483 TWIST1Q15672 202 aa3.26□□□□□ -1.89
HMGB3P21-201ENST00000452483 FAM182AQ5T1J6 154 aa3.26□□□□□ -1.89
HMGB3P21-201ENST00000452483 WDR86Q86TI4 376 aa3.26□□□□□ -1.89
HMGB3P21-201ENST00000452483 ZNF695Q8IW36 515 aa3.26□□□□□ -1.89
HMGB3P21-201ENST00000452483 TCTEX1D1Q8N7M0 179 aa3.26□□□□□ -1.89
HMGB3P21-201ENST00000452483 LINC01555Q8NAE3 123 aa3.26□□□□□ -1.89
HMGB3P21-201ENST00000452483 OR2M3Q8NG83 312 aa3.26□□□□□ -1.89
HMGB3P21-201ENST00000452483 OR4C16Q8NGL9 310 aa3.26□□□□□ -1.89
HMGB3P21-201ENST00000452483 OR10D4PQ8NGN7 298 aa3.26□□□□□ -1.89
HMGB3P21-201ENST00000452483 MRPL30Q8TCC3 161 aaKnown RBP3.26□□□□□ -1.89
HMGB3P21-201ENST00000452483 ZNF418Q8TF45 676 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P21-201ENST00000452483 RAB2BQ8WUD1 216 aa3.26□□□□□ -1.89
HMGB3P21-201ENST00000452483 RTN4IP1Q8WWV3 396 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P21-201ENST00000452483 SLAMF6Q96DU3 332 aa3.26□□□□□ -1.89
HMGB3P21-201ENST00000452483 BORCS8Q96FH0 119 aa3.26□□□□□ -1.89
HMGB3P21-201ENST00000452483 TRIB3Q96RU7 358 aa3.26□□□□□ -1.89
HMGB3P21-201ENST00000452483 NRIP2Q9BQI9 281 aa3.26□□□□□ -1.89
HMGB3P21-201ENST00000452483 OR5AC2Q9NZP5 309 aa3.26□□□□□ -1.89
HMGB3P21-201ENST00000452483 CTSZQ9UBR2 303 aa3.26□□□□□ -1.89
HMGB3P21-201ENST00000452483 BAIAP2Q9UQB8 552 aa3.26□□□□□ -1.89
HMGB3P21-201ENST00000452483 HS3ST2Q9Y278 367 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 822.7 ms