RNA–Protein interactions for RNA: ENST00000447578.6

VPS29-202, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 996 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-202ENST00000447578 FAM231BA6NCW3 169 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 OR5H14A6NHG9 310 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 GJE1A6NN92 205 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 MRPS12O15235 138 aaKnown RBP3.03□□□□□ -1.92
VPS29-202ENST00000447578 SOCS1O15524 211 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 EIF1BO60739 113 aaKnown RBP3.03□□□□□ -1.92
VPS29-202ENST00000447578 CRTAPO75718 401 aaPredicted RBP3.03□□□□□ -1.92
VPS29-202ENST00000447578 EIF3GO75821 320 aaKnown RBP eCLIP3.03□□□□□ -1.92
VPS29-202ENST00000447578 KLF7O75840 302 aaPredicted RBP3.03□□□□□ -1.92
VPS29-202ENST00000447578 SCO1O75880 301 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 TDGF1P13385 188 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 ZNF250P15622 560 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 HIST1H1DP16402 221 aaKnown RBP3.03□□□□□ -1.92
VPS29-202ENST00000447578 AKR1C4P17516 323 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 CCL1P22362 96 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 ZBTB25P24278 435 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 COX7A1P24310 79 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 AGTR1P30556 359 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 HRH1P35367 487 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 GPR6P46095 362 aaPredicted RBP3.03□□□□□ -1.92
VPS29-202ENST00000447578 NPBWR2P48146 333 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 DLX1P56177 255 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 MLF1P58340 268 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 LSM6P62312 80 aaKnown RBP3.03□□□□□ -1.92
VPS29-202ENST00000447578 H3F3AP84243 136 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 DHRS2Q13268 280 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 PPP1R1AQ13522 171 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 ARFRP1Q13795 201 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 ENDOGQ14249 297 aaKnown RBP3.03□□□□□ -1.92
VPS29-202ENST00000447578 HIST3H3Q16695 136 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 C15orf32Q32M92 178 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 ACTBL2Q562R1 376 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 CLVS2Q5SYC1 327 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 ALKAL2Q6UX46 152 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 TFAP2EQ6VUC0 442 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 LYG2Q86SG7 212 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 C20orf196Q8IYI0 205 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 KIR2DL5AQ8N109 375 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 HSD17B11Q8NBQ5 300 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 TMEM104Q8NE00 496 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 OR51T1Q8NGJ9 327 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 OR5D18Q8NGL1 313 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 OR2Y1Q8NGV0 311 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 OR5H2Q8NGV7 314 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 OR10K1Q8NGX5 313 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 OR4K15Q8NH41 348 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 OR9G1Q8NH87 305 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 KIR2DL5BQ8NHK3 375 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 SUN5Q8TC36 379 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 CASTOR1Q8WTX7 329 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 CA5BP1Q8WTZ4 195 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 C17orf50Q8WW18 174 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 ASB13Q8WXK3 278 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 RBPMSQ93062 196 aaKnown RBP3.03□□□□□ -1.92
VPS29-202ENST00000447578 PHB2Q99623 299 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 ULBP2Q9BZM5 246 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 ACTR3CQ9C0K3 210 aaPredicted RBP3.03□□□□□ -1.92
VPS29-202ENST00000447578 ZDHHC11Q9H8X9 412 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 PROK2Q9HC23 129 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 RETNQ9HD89 108 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 MYOZ1Q9NP98 299 aaPredicted RBP3.03□□□□□ -1.92
VPS29-202ENST00000447578 NINQ8N4C6 2090 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 SCN2AQ99250 2005 aa3.03□□□□□ -1.92
VPS29-202ENST00000447578 COL5A1P20908 1838 aaPredicted RBP3.03□□□□□ -1.93
VPS29-202ENST00000447578 RAI1Q7Z5J4 1906 aaPredicted RBP3.02□□□□□ -1.93
VPS29-202ENST00000447578 A0A0D9SG52 128 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 A0A0G2JMM0 328 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 A0A0J9YW62 118 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 A0A1W2PPB8 328 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 A0A1W2PPV4 95 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 KANTRA0A1W2PQU2 76 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 A0A1W2PRS3 328 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 OR2AT4A6NND4 320 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 KIR3DP1A8MWS1 328 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 EEF1E1-BLOC1S5C9J1V9 151 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 C12orf77C9JDV5 145 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 M0R135 149 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 MFNGO00587 321 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 FCN3O75636 299 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 CBR3O75828 277 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 TRAPPC6AO75865 159 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 DHRS3O75911 302 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 VAMP5O95183 116 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 IGLV3-1P01715 115 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 CD8AP01732 235 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 IGHV3-23P01764 117 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 APOC1P02654 83 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 RLN2P04090 185 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 HPNP05981 417 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 SERPINE2P07093 398 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 NMBP08949 121 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 UBBP0CG47 229 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 SLC25A4P12235 298 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 MGMTP16455 207 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 ZNF17P17021 662 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 TCN2P20062 427 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 BLVRBP30043 206 aaPredicted RBP3.02□□□□□ -1.93
VPS29-202ENST00000447578 CBX5P45973 191 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 MEOX2P50222 304 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 ZNF133P52736 654 aaPredicted RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms