RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 MENTQ9BUN1 341 aa6.74□□□□□ -1.33
SMG1-202ENST00000446231 DUSP3P51452 185 aaPredicted RBP6.74□□□□□ -1.33
SMG1-202ENST00000446231 DSCR4P56555 118 aaPredicted RBP6.74□□□□□ -1.33
SMG1-202ENST00000446231 ID3Q02535 119 aa6.74□□□□□ -1.33
SMG1-202ENST00000446231 PPIAL4AQ9Y536 164 aa6.74□□□□□ -1.33
SMG1-202ENST00000446231 TRGV10A0A0A0MS01 117 aa6.74□□□□□ -1.33
SMG1-202ENST00000446231 SLC25A17O43808 307 aa6.74□□□□□ -1.33
SMG1-202ENST00000446231 ANKRD37Q7Z713 158 aa6.74□□□□□ -1.33
SMG1-202ENST00000446231 ZNF766Q5HY98 468 aa6.74□□□□□ -1.33
SMG1-202ENST00000446231 PRNTQ86SH4 94 aa6.74□□□□□ -1.33
SMG1-202ENST00000446231 SAXO1Q8IYX7 474 aa6.74□□□□□ -1.33
SMG1-202ENST00000446231 ZNF721Q8TF20 911 aa6.74□□□□□ -1.33
SMG1-202ENST00000446231 FAM216AQ8WUB2 273 aa6.74□□□□□ -1.33
SMG1-202ENST00000446231 A0A1B0GUS0 222 aa6.74□□□□□ -1.33
SMG1-202ENST00000446231 C9orf40Q8IXQ3 194 aa6.74□□□□□ -1.33
SMG1-202ENST00000446231 CD55P08174 381 aa6.74□□□□□ -1.33
SMG1-202ENST00000446231 MRPS11P82912 194 aaKnown RBP6.74□□□□□ -1.33
SMG1-202ENST00000446231 FOXB1Q99853 325 aa6.74□□□□□ -1.33
SMG1-202ENST00000446231 GPX1P07203 203 aa6.74□□□□□ -1.33
SMG1-202ENST00000446231 C1QTNF9P0C862 333 aa6.74□□□□□ -1.33
SMG1-202ENST00000446231 CDKN1AP38936 164 aa6.74□□□□□ -1.33
SMG1-202ENST00000446231 TNRC6AQ8NDV7 1962 aaKnown RBP6.74□□□□□ -1.33
SMG1-202ENST00000446231 MT-CO3P00414 261 aa6.74□□□□□ -1.33
SMG1-202ENST00000446231 SCCPDHQ8NBX0 429 aa6.74□□□□□ -1.33
SMG1-202ENST00000446231 HCFC2Q9Y5Z7 792 aa6.74□□□□□ -1.33
SMG1-202ENST00000446231 RSPO3Q9BXY4 272 aaPredicted RBP6.74□□□□□ -1.33
SMG1-202ENST00000446231 FAM89BQ8N5H3 189 aa6.74□□□□□ -1.33
SMG1-202ENST00000446231 TM4SF19Q96DZ7 209 aa6.74□□□□□ -1.33
SMG1-202ENST00000446231 OOEPA6NGQ2 149 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 RPEQ96AT9 228 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 CLEC1BQ9P126 229 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 RFNGQ9Y644 331 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 TRAV30A0A087WSZ9 112 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 TEX43Q6ZNM6 134 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 MUC15Q8N387 334 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 BADQ92934 168 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 COL18A1P39060 1754 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 FOXS1O43638 330 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 SLC23A3Q6PIS1 610 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 ANKRD33Q7Z3H0 272 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 OR4F17Q8NGA8 305 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 IL36GQ9NZH8 169 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 IL11P20809 199 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 ADMP35318 185 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 TFF3Q07654 80 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 PSME4Q14997 1843 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 HBBP68871 147 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 QRFPP83859 136 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 TNFSF15O95150 251 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 OR2K2Q8NGT1 345 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 THYN1Q9P016 225 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 CA7P43166 264 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 IBA57Q5T440 356 aaKnown RBP6.73□□□□□ -1.33
SMG1-202ENST00000446231 TMEM140Q9NV12 185 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 ZFHX2Q9C0A1 2572 aaPredicted RBP6.73□□□□□ -1.33
SMG1-202ENST00000446231 J3QT63 122 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 NAPSAO96009 420 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 VCX2Q9H322 139 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 MPC1Q9Y5U8 109 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 LOC107984156A0A0G2JMH3 177 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 SMIM10L1P0DMW3 83 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 ARL17AQ8IVW1 177 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 SMIM10Q96HG1 83 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 UCN2Q96RP3 112 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 CST9LQ9H4G1 147 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 TMEM171Q8WVE6 324 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 CHODLQ9H9P2 273 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 WNT16Q9UBV4 365 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 FAM90A10PA6NDY2 464 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 FAM90A18PA6NE21 464 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 FAM90A16PA6NEW6 464 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 FAM90A20PA6NIJ5 464 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 FAM90A8PA6NJQ4 464 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 FAM90A7PA6NKC0 464 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 FAM90A22PA8MWA6 464 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 FAM90A12PA8MX19 464 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 FAM90A5PA8MXJ8 464 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 FAM90A23PA8MXZ1 464 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 FAM90A15PP0C7V4 464 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 FAM90A13PP0C7W8 464 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 FAM90A14PP0C7W9 464 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 FAM90A24PP0C7X0 464 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 OR5P3Q8WZ94 311 aa6.73□□□□□ -1.33
SMG1-202ENST00000446231 PFN1P07737 140 aaKnown RBP6.72□□□□□ -1.33
SMG1-202ENST00000446231 CCL2P13500 99 aa6.72□□□□□ -1.33
SMG1-202ENST00000446231 SAMD5Q5TGI4 173 aa6.72□□□□□ -1.33
SMG1-202ENST00000446231 LILRA6Q6PI73 481 aa6.72□□□□□ -1.33
SMG1-202ENST00000446231 CXorf67Q86X51 503 aaPredicted RBP6.72□□□□□ -1.33
SMG1-202ENST00000446231 ZNF355PQ9NSJ1 428 aa6.72□□□□□ -1.33
SMG1-202ENST00000446231 SPINT1O43278 529 aa6.72□□□□□ -1.33
SMG1-202ENST00000446231 UCP1P25874 307 aa6.72□□□□□ -1.33
SMG1-202ENST00000446231 TMEM108Q6UXF1 575 aa6.72□□□□□ -1.33
SMG1-202ENST00000446231 DNM1P46Q6ZS02 220 aa6.72□□□□□ -1.33
SMG1-202ENST00000446231 A0A0A6YYD4 124 aa6.72□□□□□ -1.33
SMG1-202ENST00000446231 CD46P15529 392 aa6.72□□□□□ -1.33
SMG1-202ENST00000446231 DMWDQ09019 674 aa6.72□□□□□ -1.33
SMG1-202ENST00000446231 OCC1Q8TAD7 63 aa6.72□□□□□ -1.33
SMG1-202ENST00000446231 AAMDCQ9H7C9 122 aa6.72□□□□□ -1.33
SMG1-202ENST00000446231 IGHV3-13P01766 116 aa6.72□□□□□ -1.33
SMG1-202ENST00000446231 IGHV3-7P01780 117 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms