RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 ARL16Q0P5N6 197 aa12.84□□□□□ -0.35
SNX13-204ENST00000444712 PEA15Q15121 130 aa12.84□□□□□ -0.35
SNX13-204ENST00000444712 OR8G2PQ6IF36 304 aa12.84□□□□□ -0.35
SNX13-204ENST00000444712 THNSL2Q86YJ6 484 aa12.84□□□□□ -0.35
SNX13-204ENST00000444712 TIMD4Q96H15 378 aa12.84□□□□□ -0.35
SNX13-204ENST00000444712 OR4C12Q96R67 309 aa12.84□□□□□ -0.35
SNX13-204ENST00000444712 WDR61Q9GZS3 305 aaKnown RBP12.84□□□□□ -0.35
SNX13-204ENST00000444712 MIOXQ9UGB7 285 aa12.84□□□□□ -0.35
SNX13-204ENST00000444712 TIMM9Q9Y5J7 89 aa12.84□□□□□ -0.35
SNX13-204ENST00000444712 C15orf61A6NNL5 157 aa12.84□□□□□ -0.35
SNX13-204ENST00000444712 CD5P06127 495 aa12.84□□□□□ -0.35
SNX13-204ENST00000444712 CT45A6P0DMU7 189 aa12.84□□□□□ -0.35
SNX13-204ENST00000444712 CT45A5P0DMU8 189 aa12.84□□□□□ -0.35
SNX13-204ENST00000444712 CT45A7P0DMV0 189 aa12.84□□□□□ -0.35
SNX13-204ENST00000444712 IL3RAP26951 378 aa12.84□□□□□ -0.35
SNX13-204ENST00000444712 DLX6P56179 175 aa12.84□□□□□ -0.35
SNX13-204ENST00000444712 GNB2P62879 340 aa12.84□□□□□ -0.35
SNX13-204ENST00000444712 RUNX1Q01196 453 aa12.84□□□□□ -0.35
SNX13-204ENST00000444712 C10orf91Q5T1B1 145 aa12.84□□□□□ -0.35
SNX13-204ENST00000444712 C11orf71Q6IPW1 123 aa12.84□□□□□ -0.35
SNX13-204ENST00000444712 SVBPQ8N300 66 aa12.84□□□□□ -0.35
SNX13-204ENST00000444712 OR10X1Q8NGY0 326 aa12.84□□□□□ -0.35
SNX13-204ENST00000444712 OR9G1Q8NH87 305 aa12.84□□□□□ -0.35
SNX13-204ENST00000444712 TNFRSF14Q92956 283 aa12.84□□□□□ -0.35
SNX13-204ENST00000444712 ZDHHC16Q969W1 377 aa12.84□□□□□ -0.35
SNX13-204ENST00000444712 FOXA2Q9Y261 457 aaPredicted RBP12.84□□□□□ -0.35
SNX13-204ENST00000444712 CARHSP1Q9Y2V2 147 aaKnown RBP12.84□□□□□ -0.35
SNX13-204ENST00000444712 F8W036 122 aa12.83□□□□□ -0.36
SNX13-204ENST00000444712 J3QR06 171 aa12.83□□□□□ -0.36
SNX13-204ENST00000444712 RBP4P02753 201 aa12.83□□□□□ -0.36
SNX13-204ENST00000444712 OR8B3Q8NGG8 313 aa12.83□□□□□ -0.36
SNX13-204ENST00000444712 OSR1Q8TAX0 266 aaPredicted RBP12.83□□□□□ -0.36
SNX13-204ENST00000444712 RAB1CQ92928 201 aa12.83□□□□□ -0.36
SNX13-204ENST00000444712 OR8B2Q96RD0 313 aa12.83□□□□□ -0.36
SNX13-204ENST00000444712 SMDT1Q9H4I9 107 aa12.83□□□□□ -0.36
SNX13-204ENST00000444712 PRNDQ9UKY0 176 aa12.83□□□□□ -0.36
SNX13-204ENST00000444712 A0A1B0GW64 132 aa12.83□□□□□ -0.36
SNX13-204ENST00000444712 C1QL1O75973 258 aa12.83□□□□□ -0.36
SNX13-204ENST00000444712 ARG1P05089 322 aa12.83□□□□□ -0.36
SNX13-204ENST00000444712 H2AFB1P0C5Y9 115 aa12.83□□□□□ -0.36
SNX13-204ENST00000444712 IGHV1-8P0DP01 117 aa12.83□□□□□ -0.36
SNX13-204ENST00000444712 ZNF137PP52743 207 aa12.83□□□□□ -0.36
SNX13-204ENST00000444712 DEFA5Q01523 94 aa12.83□□□□□ -0.36
SNX13-204ENST00000444712 AKR1C1Q04828 323 aa12.83□□□□□ -0.36
SNX13-204ENST00000444712 OR4A47Q6IF82 309 aa12.83□□□□□ -0.36
SNX13-204ENST00000444712 DTX2Q86UW9 622 aa12.83□□□□□ -0.36
SNX13-204ENST00000444712 OR13D1Q8NGV5 346 aa12.83□□□□□ -0.36
SNX13-204ENST00000444712 ITLN2Q8WWU7 325 aaPredicted RBP12.83□□□□□ -0.36
SNX13-204ENST00000444712 PKDREJQ9NTG1 2253 aa12.82□□□□□ -0.36
SNX13-204ENST00000444712 PMS2P5A8MQ11 134 aa12.82□□□□□ -0.36
SNX13-204ENST00000444712 AGPAT2O15120 278 aa12.82□□□□□ -0.36
SNX13-204ENST00000444712 FHITP49789 147 aa12.82□□□□□ -0.36
SNX13-204ENST00000444712 TAF15Q92804 592 aaKnown RBP eCLIP12.82□□□□□ -0.36
SNX13-204ENST00000444712 NEIL1Q96FI4 390 aaPredicted RBP12.82□□□□□ -0.36
SNX13-204ENST00000444712 PCGF1Q9BSM1 259 aa12.82□□□□□ -0.36
SNX13-204ENST00000444712 ENY2Q9NPA8 101 aa12.82□□□□□ -0.36
SNX13-204ENST00000444712 HEYLQ9NQ87 328 aaPredicted RBP12.82□□□□□ -0.36
SNX13-204ENST00000444712 FKBP11Q9NYL4 201 aa12.82□□□□□ -0.36
SNX13-204ENST00000444712 UBE2L5PA0A1B0GUS4 154 aa12.81□□□□□ -0.36
SNX13-204ENST00000444712 hCG_1809904A0A1W2PP81 198 aa12.81□□□□□ -0.36
SNX13-204ENST00000444712 A0A1W2PPE2 198 aa12.81□□□□□ -0.36
SNX13-204ENST00000444712 A0A1W2PR64 198 aa12.81□□□□□ -0.36
SNX13-204ENST00000444712 A0A1W2PRV1 198 aa12.81□□□□□ -0.36
SNX13-204ENST00000444712 MED19A0JLT2 244 aaPredicted RBP12.81□□□□□ -0.36
SNX13-204ENST00000444712 SCO1O75880 301 aa12.81□□□□□ -0.36
SNX13-204ENST00000444712 GNLYP22749 145 aa12.81□□□□□ -0.36
SNX13-204ENST00000444712 SRSF3P84103 164 aaKnown RBP12.81□□□□□ -0.36
SNX13-204ENST00000444712 GUK1Q16774 197 aa12.81□□□□□ -0.36
SNX13-204ENST00000444712 VWC2Q2TAL6 325 aa12.81□□□□□ -0.36
SNX13-204ENST00000444712 VKORC1L1Q8N0U8 176 aa12.81□□□□□ -0.36
SNX13-204ENST00000444712 C8orf46Q8TAG6 207 aa12.81□□□□□ -0.36
SNX13-204ENST00000444712 SUN5Q8TC36 379 aa12.81□□□□□ -0.36
SNX13-204ENST00000444712 RBMXL1Q96E39 390 aaKnown RBP12.81□□□□□ -0.36
SNX13-204ENST00000444712 GGACTQ9BVM4 153 aa12.81□□□□□ -0.36
SNX13-204ENST00000444712 TMEM133Q9H2Q1 129 aa12.81□□□□□ -0.36
SNX13-204ENST00000444712 TMEM14BQ9NUH8 114 aa12.81□□□□□ -0.36
SNX13-204ENST00000444712 TCF19Q9Y242 345 aa12.81□□□□□ -0.36
SNX13-204ENST00000444712 ZNF257Q9Y2Q1 563 aa12.81□□□□□ -0.36
SNX13-204ENST00000444712 FBXO7Q9Y3I1 522 aa12.81□□□□□ -0.36
SNX13-204ENST00000444712 ANKHD1Q8IWZ3 2542 aaKnown RBP12.81□□□□□ -0.36
SNX13-204ENST00000444712 ROS1P08922 2347 aa12.81□□□□□ -0.36
SNX13-204ENST00000444712 DOCK11Q5JSL3 2073 aa12.81□□□□□ -0.36
SNX13-204ENST00000444712 SOX15O60248 233 aa12.81□□□□□ -0.36
SNX13-204ENST00000444712 HOXA1P49639 335 aaPredicted RBP12.81□□□□□ -0.36
SNX13-204ENST00000444712 HSPE1P61604 102 aaKnown RBP12.81□□□□□ -0.36
SNX13-204ENST00000444712 RAB11AP62491 216 aa12.81□□□□□ -0.36
SNX13-204ENST00000444712 CENPVQ7Z7K6 275 aaPredicted RBP12.81□□□□□ -0.36
SNX13-204ENST00000444712 PDPNQ86YL7 162 aa12.81□□□□□ -0.36
SNX13-204ENST00000444712 OR5AN1Q8NGI8 311 aa12.81□□□□□ -0.36
SNX13-204ENST00000444712 RSG1Q9BU20 258 aa12.81□□□□□ -0.36
SNX13-204ENST00000444712 TMEM231Q9H6L2 316 aa12.81□□□□□ -0.36
SNX13-204ENST00000444712 BET1LQ9NYM9 111 aa12.81□□□□□ -0.36
SNX13-204ENST00000444712 FAM96BQ9Y3D0 163 aa12.81□□□□□ -0.36
SNX13-204ENST00000444712 C15orf62A8K5M9 175 aa12.8□□□□□ -0.36
SNX13-204ENST00000444712 LYNX1G3V0Z9 82 aa12.8□□□□□ -0.36
SNX13-204ENST00000444712 IFNA10P01566 189 aa12.8□□□□□ -0.36
SNX13-204ENST00000444712 LYNX1P0DP58 116 aa12.8□□□□□ -0.36
SNX13-204ENST00000444712 VDAC2P45880 294 aaPredicted RBP12.8□□□□□ -0.36
SNX13-204ENST00000444712 RAB13P51153 203 aa12.8□□□□□ -0.36
SNX13-204ENST00000444712 ZNF841Q6ZN19 808 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms