RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 SCO2A0A1W2PP80 73 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 GFERP55789 205 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 DEFB119Q8N690 84 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 SPACA9Q96E40 222 aaPredicted RBP4.25□□□□□ -1.73
HERC1-201ENST00000443617 UCN2Q96RP3 112 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 LRRC30A6NM36 301 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 G6PCP35575 357 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 OR10J3Q5JRS4 329 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 TMEM14EPQ6UXP3 125 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 KMT5CQ86Y97 462 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 ZNF441Q8N8Z8 693 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 FER1L6-AS1Q8NA97 138 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 SPSB4Q96A44 273 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 FNDC4Q9H6D8 234 aaPredicted RBP4.25□□□□□ -1.73
HERC1-201ENST00000443617 DUSP3P51452 185 aaPredicted RBP4.25□□□□□ -1.73
HERC1-201ENST00000443617 ZIC4Q8N9L1 334 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 STRADBQ9C0K7 418 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 IGKV1-12A0A0C4DH73 117 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 IGKV1D-12P01611 117 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 OR10J4P0C629 311 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 SEC11AP67812 179 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 RTL8BQ17RB0 113 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 TMEM97Q5BJF2 176 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 VASH2Q86V25 355 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 HSD17B10Q99714 261 aaKnown RBP4.25□□□□□ -1.73
HERC1-201ENST00000443617 IGHV5-51A0A0C4DH38 117 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 NPY1RP25929 384 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 ATP23Q9Y6H3 246 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 F2Z2F3 143 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 SYNGR3O43761 229 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 OR10AG1Q8NH19 301 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 TSKUQ8WUA8 353 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 ZNF501Q96CX3 271 aaPredicted RBP4.25□□□□□ -1.73
HERC1-201ENST00000443617 MYO9AB2RTY4 2548 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 PLXNA4Q9HCM2 1894 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 OR5AL1P0C617 328 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 EN2P19622 333 aaPredicted RBP4.25□□□□□ -1.73
HERC1-201ENST00000443617 OPRK1P41145 380 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 GPR12P47775 334 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 TMEM249Q2WGJ8 235 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 UBALD1Q8TB05 177 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 NANOS1Q8WY41 292 aaKnown RBP4.25□□□□□ -1.73
HERC1-201ENST00000443617 TMEM38BQ9NVV0 291 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 A0A1B0GV72 72 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 C7orf71A4D174 169 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 IZUMO1RA6ND01 250 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 ISLRO14498 428 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 IGKV1-5P01602 117 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 TRAT1Q6PIZ9 186 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 ABI3Q9P2A4 366 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 LY96Q9Y6Y9 160 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 PLXNB3Q9ULL4 1909 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 GRAMD2BQ96HH9 432 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 PATE4P0C8F1 98 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 LINC00596Q86U02 117 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 PLXDC1Q8IUK5 500 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 TMEM45BQ96B21 275 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 OR1A1Q9P1Q5 309 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 ZSWIM8A7E2V4 1837 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 G3V3Y1 287 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 MPV17L2Q567V2 206 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 TECRQ9NZ01 308 aaKnown RBP4.25□□□□□ -1.73
HERC1-201ENST00000443617 CHTOPQ9Y3Y2 248 aaKnown RBP4.25□□□□□ -1.73
HERC1-201ENST00000443617 SORL1Q92673 2214 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 C5orf49A4QMS7 147 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 NHLH1Q02575 133 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 IL36RNQ9UBH0 155 aa4.25□□□□□ -1.73
HERC1-201ENST00000443617 CLDN14O95500 239 aa4.24□□□□□ -1.73
HERC1-201ENST00000443617 BVES-AS1Q5T3Y7 98 aa4.24□□□□□ -1.73
HERC1-201ENST00000443617 ZBTB34Q8NCN2 500 aa4.24□□□□□ -1.73
HERC1-201ENST00000443617 IGHV3-15A0A0B4J1V0 119 aa4.24□□□□□ -1.73
HERC1-201ENST00000443617 CENPWQ5EE01 88 aa4.24□□□□□ -1.73
HERC1-201ENST00000443617 FAM131CQ96AQ9 280 aa4.24□□□□□ -1.73
HERC1-201ENST00000443617 MAP1LC3CQ9BXW4 147 aa4.24□□□□□ -1.73
HERC1-201ENST00000443617 PGPEP1LA6NFU8 196 aa4.24□□□□□ -1.73
HERC1-201ENST00000443617 LILRA5A6NI73 299 aa4.24□□□□□ -1.73
HERC1-201ENST00000443617 CD5LO43866 347 aa4.24□□□□□ -1.73
HERC1-201ENST00000443617 IGKV1D-33P01593 117 aa4.24□□□□□ -1.73
HERC1-201ENST00000443617 IGKV1-33P01594 117 aa4.24□□□□□ -1.73
HERC1-201ENST00000443617 FAM71F2Q6NXP2 309 aa4.24□□□□□ -1.73
HERC1-201ENST00000443617 DHRS13Q6UX07 377 aa4.24□□□□□ -1.73
HERC1-201ENST00000443617 OR8B3Q8NGG8 313 aa4.24□□□□□ -1.73
HERC1-201ENST00000443617 HLA-DRB1P01911 266 aa4.24□□□□□ -1.73
HERC1-201ENST00000443617 TBR1Q16650 682 aa4.24□□□□□ -1.73
HERC1-201ENST00000443617 KMT2EQ8IZD2 1858 aa4.24□□□□□ -1.73
HERC1-201ENST00000443617 OSTCQ9NRP0 149 aa4.24□□□□□ -1.73
HERC1-201ENST00000443617 THADAQ6YHU6 1953 aa4.24□□□□□ -1.73
HERC1-201ENST00000443617 COL4A4P53420 1690 aaPredicted RBP4.24□□□□□ -1.73
HERC1-201ENST00000443617 IGKV1-6A0A0C4DH72 117 aa4.24□□□□□ -1.73
HERC1-201ENST00000443617 MUC21A0A0G2JKD1 596 aa4.24□□□□□ -1.73
HERC1-201ENST00000443617 MUC21A0A140T8X8 626 aa4.24□□□□□ -1.73
HERC1-201ENST00000443617 TAS2R45P59539 299 aa4.24□□□□□ -1.73
HERC1-201ENST00000443617 FGF12P61328 243 aa4.24□□□□□ -1.73
HERC1-201ENST00000443617 MUC21Q5SSG8 566 aa4.24□□□□□ -1.73
HERC1-201ENST00000443617 C10orf128Q5T292 105 aa4.24□□□□□ -1.73
HERC1-201ENST00000443617 STPG3Q8N7X2 389 aa4.24□□□□□ -1.73
HERC1-201ENST00000443617 ABHD3Q8WU67 409 aa4.24□□□□□ -1.73
HERC1-201ENST00000443617 TMPRSS2O15393 492 aa4.24□□□□□ -1.73
HERC1-201ENST00000443617 GALMQ96C23 342 aa4.24□□□□□ -1.73
HERC1-201ENST00000443617 ZNF207O43670 478 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms