RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 TIAF1O95411 115 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 TSPAN13O95857 204 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 SLC35E2P0CK97 266 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 GAGE12FP0CL80 117 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 GAGE12GP0CL81 117 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 GAGE12IP0CL82 117 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 GP1BBP13224 206 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 IGFBP2P18065 325 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 FUT1P19526 365 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 SSR2P43308 183 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 UCNP55089 124 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 RPL23P62829 140 aaKnown RBP2.38□□□□□ -2.03
LIG4-203ENST00000442234 SRYQ05066 204 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 GAGE4Q13068 117 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 PRDX4Q13162 271 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 PCK2Q16822 640 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 PLAC9Q5JTB6 97 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 RFLNBQ8N5W9 214 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 OR5D14Q8NGL3 314 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 ADAMTS15Q8TE58 950 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 ZNRF4Q8WWF5 429 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 OR5P2Q8WZ92 322 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 GMPPAQ96IJ6 420 aaPredicted RBP2.38□□□□□ -2.03
LIG4-203ENST00000442234 RAX2Q96IS3 184 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 Q96M85 177 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 ZNF681Q96N22 645 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 NRTNQ99748 197 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 C1QTNF4Q9BXJ3 329 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 TMEM191AQ9H0A3 160 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 BANF2Q9H503 90 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 ZNF286AQ9HBT8 521 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 FGF22Q9HCT0 170 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 PHPT1Q9NRX4 125 aaPredicted RBP2.38□□□□□ -2.03
LIG4-203ENST00000442234 CISD1Q9NZ45 108 aaKnown RBP2.38□□□□□ -2.03
LIG4-203ENST00000442234 CSMD1Q96PZ7 3565 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 KMT2EQ8IZD2 1858 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 PSMB11A5LHX3 300 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 TMEM8BA6NDV4 472 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 OR4C46A6NHA9 309 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 PRKNO60260 465 aaPredicted RBP2.38□□□□□ -2.03
LIG4-203ENST00000442234 CEACAM4O75871 244 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 KBTBD11O94819 623 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 BRI3O95415 125 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 NTN1O95631 604 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 SLC25A6P12236 298 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 ADRA2CP18825 462 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 AADACP22760 399 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 GPR183P32249 361 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 FASLGP48023 281 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 FXYD4P59646 89 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 SEC11AP67812 179 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 EWSR1Q01844 656 aaKnown RBP eCLIP2.38□□□□□ -2.036e-11■■■■■ 40.6
LIG4-203ENST00000442234 FMODQ06828 376 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 METRNLQ641Q3 311 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 FAM90A2PQ658T7 463 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 RNASEKQ6P5S7 137 aaKnown RBP2.38□□□□□ -2.03
LIG4-203ENST00000442234 GDF7Q7Z4P5 450 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 YRDCQ86U90 279 aaKnown RBP2.38□□□□□ -2.03
LIG4-203ENST00000442234 SCCPDHQ8NBX0 429 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 NPEPL1Q8NDH3 523 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 VSTM2AQ8TAG5 236 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 MRPL30Q8TCC3 161 aaKnown RBP2.38□□□□□ -2.03
LIG4-203ENST00000442234 EMG1Q92979 244 aaKnown RBP2.38□□□□□ -2.03
LIG4-203ENST00000442234 NAT6Q93015 286 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 MRPL24Q96A35 216 aaKnown RBP2.38□□□□□ -2.03
LIG4-203ENST00000442234 MSI2Q96DH6 328 aaKnown RBP2.38□□□□□ -2.03
LIG4-203ENST00000442234 TAAR6Q96RI8 345 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 RASL10BQ96S79 203 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 TIMP4Q99727 224 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 RBM24Q9BX46 236 aaKnown RBP2.38□□□□□ -2.03
LIG4-203ENST00000442234 ULBP2Q9BZM5 246 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 THAP10Q9P2Z0 257 aaPredicted RBP2.38□□□□□ -2.03
LIG4-203ENST00000442234 CES1P1Q9UKY3 287 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 SLC17A4Q9Y2C5 497 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 ZNF257Q9Y2Q1 563 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 SOX21Q9Y651 276 aaPredicted RBP2.38□□□□□ -2.03
LIG4-203ENST00000442234 COL11A1P12107 1806 aaPredicted RBP2.38□□□□□ -2.03
LIG4-203ENST00000442234 FREM1Q5H8C1 2179 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 A0A1B0GWB2 263 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 IGSF23A1L1A6 192 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 GLOD5A6NK44 160 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 TMEM212A6NML5 194 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 J3QR06 171 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 P2RY10O00398 339 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 HS3ST1O14792 307 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 MPIG6BO95866 241 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 GPX1P07203 203 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 ZNF728P0DKX0 622 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 IGLL1P15814 213 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 HOXD9P28356 352 aaPredicted RBP2.37□□□□□ -2.03
LIG4-203ENST00000442234 NKX2-1P43699 371 aaPredicted RBP2.37□□□□□ -2.03
LIG4-203ENST00000442234 MTCP1P56278 107 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 PPP1CAP62136 330 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 UBE2G1P62253 170 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 PLP2Q04941 152 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 ATP5G2Q06055 141 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 ZP4Q12836 540 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 OR8B8Q15620 311 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 ETDBQ3ZM63 59 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 NRN1LQ496H8 165 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms