RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 PPYP01298 95 aa6.72□□□□□ -1.33
CCDC39-201ENST00000442201 HLA-AP01891 365 aaKnown RBP6.72□□□□□ -1.33
CCDC39-201ENST00000442201 PI3P19957 117 aa6.72□□□□□ -1.33
CCDC39-201ENST00000442201 AADACP22760 399 aa6.72□□□□□ -1.33
CCDC39-201ENST00000442201 RAB7AP51149 207 aa6.72□□□□□ -1.33
CCDC39-201ENST00000442201 UBE2MP61081 183 aaKnown RBP6.72□□□□□ -1.33
CCDC39-201ENST00000442201 IL13RA1P78552 427 aa6.72□□□□□ -1.33
CCDC39-201ENST00000442201 DHRS2Q13268 280 aa6.72□□□□□ -1.33
CCDC39-201ENST00000442201 TMEM128Q5BJH2 165 aa6.72□□□□□ -1.33
CCDC39-201ENST00000442201 PDZD11Q5EBL8 140 aa6.72□□□□□ -1.33
CCDC39-201ENST00000442201 C11orf71Q6IPW1 123 aa6.72□□□□□ -1.33
CCDC39-201ENST00000442201 TPRX1Q8N7U7 411 aa6.72□□□□□ -1.33
CCDC39-201ENST00000442201 SLC35G3Q8N808 338 aa6.72□□□□□ -1.33
CCDC39-201ENST00000442201 ADAD2Q8NCV1 583 aaKnown RBP6.72□□□□□ -1.33
CCDC39-201ENST00000442201 MOB3AQ96BX8 217 aa6.72□□□□□ -1.33
CCDC39-201ENST00000442201 SMIM12Q96EX1 92 aa6.72□□□□□ -1.33
CCDC39-201ENST00000442201 CCL13Q99616 98 aa6.72□□□□□ -1.33
CCDC39-201ENST00000442201 CABLES2Q9BTV7 478 aa6.72□□□□□ -1.33
CCDC39-201ENST00000442201 CACNA1DQ01668 2161 aa6.71□□□□□ -1.33
CCDC39-201ENST00000442201 MYO18BQ8IUG5 2567 aa6.71□□□□□ -1.33
CCDC39-201ENST00000442201 XKRY2A2RUG3 117 aa6.71□□□□□ -1.33
CCDC39-201ENST00000442201 CBY3A6NI87 242 aa6.71□□□□□ -1.33
CCDC39-201ENST00000442201 HPRT1P00492 218 aa6.71□□□□□ -1.33
CCDC39-201ENST00000442201 CTSDP07339 412 aaPredicted RBP6.71□□□□□ -1.33
CCDC39-201ENST00000442201 CXCL1P09341 107 aa6.71□□□□□ -1.33
CCDC39-201ENST00000442201 LPAR6P43657 344 aa6.71□□□□□ -1.33
CCDC39-201ENST00000442201 PDLIM4P50479 330 aa6.71□□□□□ -1.33
CCDC39-201ENST00000442201 EDDM3BP56851 147 aa6.71□□□□□ -1.33
CCDC39-201ENST00000442201 PPP1R1AQ13522 171 aa6.71□□□□□ -1.33
CCDC39-201ENST00000442201 IQCJQ1A5X6 159 aa6.71□□□□□ -1.33
CCDC39-201ENST00000442201 LYG2Q86SG7 212 aa6.71□□□□□ -1.33
CCDC39-201ENST00000442201 Q8WTZ3 238 aa6.71□□□□□ -1.33
CCDC39-201ENST00000442201 GAFA1Q96PS6 74 aa6.71□□□□□ -1.33
CCDC39-201ENST00000442201 C20orf144Q9BQM9 153 aa6.71□□□□□ -1.33
CCDC39-201ENST00000442201 RTBDNQ9BSG5 229 aaPredicted RBP6.71□□□□□ -1.33
CCDC39-201ENST00000442201 FAM234AQ9H0X4 552 aa6.71□□□□□ -1.33
CCDC39-201ENST00000442201 HRH4Q9H3N8 390 aa6.71□□□□□ -1.33
CCDC39-201ENST00000442201 ZNF430Q9H8G1 570 aaPredicted RBP6.71□□□□□ -1.33
CCDC39-201ENST00000442201 UBTD1Q9HAC8 227 aa6.71□□□□□ -1.33
CCDC39-201ENST00000442201 LAMP3Q9UQV4 416 aa6.71□□□□□ -1.33
CCDC39-201ENST00000442201 ODAMA1E959 279 aa6.71□□□□□ -1.34
CCDC39-201ENST00000442201 C12orf77C9JDV5 145 aa6.71□□□□□ -1.34
CCDC39-201ENST00000442201 J3KRW8 73 aa6.71□□□□□ -1.34
CCDC39-201ENST00000442201 TMPRSS2O15393 492 aa6.71□□□□□ -1.34
CCDC39-201ENST00000442201 STAG3L3P0CL85 134 aa6.71□□□□□ -1.34
CCDC39-201ENST00000442201 ZBTB25P24278 435 aa6.71□□□□□ -1.34
CCDC39-201ENST00000442201 CEBPGP53567 150 aa6.71□□□□□ -1.34
CCDC39-201ENST00000442201 UCP3P55916 312 aa6.71□□□□□ -1.34
CCDC39-201ENST00000442201 ZNF674Q2M3X9 581 aa6.71□□□□□ -1.34
CCDC39-201ENST00000442201 TRAT1Q6PIZ9 186 aa6.71□□□□□ -1.34
CCDC39-201ENST00000442201 TCF24Q7RTU0 167 aa6.71□□□□□ -1.34
CCDC39-201ENST00000442201 CASTOR1Q8WTX7 329 aa6.71□□□□□ -1.34
CCDC39-201ENST00000442201 GALMQ96C23 342 aa6.71□□□□□ -1.34
CCDC39-201ENST00000442201 CHD3Q12873 2000 aaKnown RBP6.7□□□□□ -1.34
CCDC39-201ENST00000442201 NPIPB11E5RHQ5 1161 aa6.7□□□□□ -1.34
CCDC39-201ENST00000442201 TUSC2O75896 110 aa6.7□□□□□ -1.34
CCDC39-201ENST00000442201 NDUFB8O95169 186 aa6.7□□□□□ -1.34
CCDC39-201ENST00000442201 GZMHP20718 246 aa6.7□□□□□ -1.34
CCDC39-201ENST00000442201 SULT1A2P50226 295 aa6.7□□□□□ -1.34
CCDC39-201ENST00000442201 PRRX1P54821 245 aa6.7□□□□□ -1.34
CCDC39-201ENST00000442201 RPL19P84098 196 aaKnown RBP6.7□□□□□ -1.34
CCDC39-201ENST00000442201 GUK1Q16774 197 aa6.7□□□□□ -1.34
CCDC39-201ENST00000442201 ABCA11PQ4W5N1 156 aa6.7□□□□□ -1.34
CCDC39-201ENST00000442201 H1FOOQ8IZA3 346 aaPredicted RBP6.7□□□□□ -1.34
CCDC39-201ENST00000442201 FAM216BQ8N7L0 139 aa6.7□□□□□ -1.34
CCDC39-201ENST00000442201 OR13A1Q8NGR1 328 aa6.7□□□□□ -1.34
CCDC39-201ENST00000442201 OR1L6Q8NGR2 347 aa6.7□□□□□ -1.34
CCDC39-201ENST00000442201 UBALD1Q8TB05 177 aa6.7□□□□□ -1.34
CCDC39-201ENST00000442201 TMED6Q8WW62 240 aa6.7□□□□□ -1.34
CCDC39-201ENST00000442201 NEU4Q8WWR8 484 aaPredicted RBP6.7□□□□□ -1.34
CCDC39-201ENST00000442201 FRZBQ92765 325 aa6.7□□□□□ -1.34
CCDC39-201ENST00000442201 OR6C3Q9NZP0 311 aa6.7□□□□□ -1.34
CCDC39-201ENST00000442201 VAX2Q9UIW0 290 aa6.7□□□□□ -1.34
CCDC39-201ENST00000442201 A0A1B0GW64 132 aa6.7□□□□□ -1.34
CCDC39-201ENST00000442201 M0R036 132 aa6.7□□□□□ -1.34
CCDC39-201ENST00000442201 TMEM230Q96A57 120 aa6.7□□□□□ -1.34
CCDC39-201ENST00000442201 POLR3KQ9Y2Y1 108 aaPredicted RBP6.7□□□□□ -1.34
CCDC39-201ENST00000442201 MMP24Q9Y5R2 645 aa6.7□□□□□ -1.34
CCDC39-201ENST00000442201 SPTAN1Q13813 2472 aaKnown RBP6.7□□□□□ -1.34
CCDC39-201ENST00000442201 SPINT2O43291 252 aa6.7□□□□□ -1.34
CCDC39-201ENST00000442201 ADAM20O43506 726 aa6.7□□□□□ -1.34
CCDC39-201ENST00000442201 DUS4LO95620 317 aaKnown RBP6.7□□□□□ -1.34
CCDC39-201ENST00000442201 HBZP02008 142 aa6.7□□□□□ -1.34
CCDC39-201ENST00000442201 TRGC2P03986 189 aa6.7□□□□□ -1.34
CCDC39-201ENST00000442201 COL8A2P25067 703 aa6.7□□□□□ -1.34
CCDC39-201ENST00000442201 HTD2P86397 168 aa6.7□□□□□ -1.34
CCDC39-201ENST00000442201 MORN2Q502X0 79 aa6.7□□□□□ -1.34
CCDC39-201ENST00000442201 DUX4L9Q6RFH8 374 aaPredicted RBP6.7□□□□□ -1.34
CCDC39-201ENST00000442201 SGPP2Q8IWX5 399 aa6.7□□□□□ -1.34
CCDC39-201ENST00000442201 OR1L1Q8NH94 360 aa6.7□□□□□ -1.34
CCDC39-201ENST00000442201 MIEN1Q9BRT3 115 aa6.7□□□□□ -1.34
CCDC39-201ENST00000442201 OR1A1Q9P1Q5 309 aa6.7□□□□□ -1.34
CCDC39-201ENST00000442201 OR2W1Q9Y3N9 320 aa6.7□□□□□ -1.34
CCDC39-201ENST00000442201 IGHV2-70DA0A0C4DH43 119 aa6.69□□□□□ -1.34
CCDC39-201ENST00000442201 LYNX1G3V0Z9 82 aa6.69□□□□□ -1.34
CCDC39-201ENST00000442201 LYNX1P0DP58 116 aa6.69□□□□□ -1.34
CCDC39-201ENST00000442201 LYL1P12980 280 aa6.69□□□□□ -1.34
CCDC39-201ENST00000442201 CD34P28906 385 aa6.69□□□□□ -1.34
CCDC39-201ENST00000442201 PIGPP57054 158 aa6.69□□□□□ -1.34
CCDC39-201ENST00000442201 RNF151Q2KHN1 245 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 414 ms