RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 LOXL3P58215 753 aa7.55□□□□□ -1.2
HDAC6-209ENST00000440653 SLC38A11Q08AI6 406 aa7.55□□□□□ -1.2
HDAC6-209ENST00000440653 TMEM267Q0VDI3 215 aaPredicted RBP7.55□□□□□ -1.2
HDAC6-209ENST00000440653 ZNF816Q0VGE8 651 aaPredicted RBP7.55□□□□□ -1.2
HDAC6-209ENST00000440653 GUK1Q16774 197 aa7.55□□□□□ -1.2
HDAC6-209ENST00000440653 PDLIM3Q53GG5 364 aaPredicted RBP7.55□□□□□ -1.2
HDAC6-209ENST00000440653 FAM71F2Q6NXP2 309 aa7.55□□□□□ -1.2
HDAC6-209ENST00000440653 CIARTQ8N365 385 aaPredicted RBP7.55□□□□□ -1.2
HDAC6-209ENST00000440653 ZNF525Q8N782 197 aa7.55□□□□□ -1.2
HDAC6-209ENST00000440653 TMEM217Q8N7C4 229 aa7.55□□□□□ -1.2
HDAC6-209ENST00000440653 TPRX1Q8N7U7 411 aa7.55□□□□□ -1.2
HDAC6-209ENST00000440653 OR52E5Q8NH55 327 aa7.55□□□□□ -1.2
HDAC6-209ENST00000440653 DTD1Q8TEA8 209 aa7.55□□□□□ -1.2
HDAC6-209ENST00000440653 R3HDM4Q96D70 268 aa7.55□□□□□ -1.2
HDAC6-209ENST00000440653 AIFM2Q9BRQ8 373 aa7.55□□□□□ -1.2
HDAC6-209ENST00000440653 RBKSQ9H477 322 aa7.55□□□□□ -1.2
HDAC6-209ENST00000440653 KCNIP2Q9NS61 270 aa7.55□□□□□ -1.2
HDAC6-209ENST00000440653 IDI2-AS1Q9NZ38 188 aa7.55□□□□□ -1.2
HDAC6-209ENST00000440653 PLCE1Q9P212 2302 aa7.55□□□□□ -1.2
HDAC6-209ENST00000440653 DSCAMO60469 2012 aa7.54□□□□□ -1.2
HDAC6-209ENST00000440653 IGHV3-43A0A0B4J1X8 118 aa7.54□□□□□ -1.2
HDAC6-209ENST00000440653 DPRXA6NFQ7 191 aa7.54□□□□□ -1.2
HDAC6-209ENST00000440653 C17orf98A8MV24 154 aa7.54□□□□□ -1.2
HDAC6-209ENST00000440653 FAM157AC9JC47 383 aa7.54□□□□□ -1.2
HDAC6-209ENST00000440653 H3BP45 60 aa7.54□□□□□ -1.2
HDAC6-209ENST00000440653 M0R1X1 148 aa7.54□□□□□ -1.2
HDAC6-209ENST00000440653 RAMP3O60896 148 aa7.54□□□□□ -1.2
HDAC6-209ENST00000440653 NDUFS6O75380 124 aaKnown RBP7.54□□□□□ -1.2
HDAC6-209ENST00000440653 FSTL3O95633 263 aa7.54□□□□□ -1.2
HDAC6-209ENST00000440653 KRASP01116 189 aa7.54□□□□□ -1.2
HDAC6-209ENST00000440653 MBP02144 154 aa7.54□□□□□ -1.2
HDAC6-209ENST00000440653 CD3EP07766 207 aa7.54□□□□□ -1.2
HDAC6-209ENST00000440653 H2AFB1P0C5Y9 115 aa7.54□□□□□ -1.2
HDAC6-209ENST00000440653 CGB3P0DN86 165 aa7.54□□□□□ -1.2
HDAC6-209ENST00000440653 CGB7P0DN87 165 aa7.54□□□□□ -1.2
HDAC6-209ENST00000440653 IGHV3-43DP0DP04 118 aa7.54□□□□□ -1.2
HDAC6-209ENST00000440653 IAPPP10997 89 aa7.54□□□□□ -1.2
HDAC6-209ENST00000440653 DAOP14920 347 aa7.54□□□□□ -1.2
HDAC6-209ENST00000440653 IGFBP2P18065 325 aa7.54□□□□□ -1.2
HDAC6-209ENST00000440653 G6PCP35575 357 aa7.54□□□□□ -1.2
HDAC6-209ENST00000440653 TAGLN2P37802 199 aaKnown RBP7.54□□□□□ -1.2
HDAC6-209ENST00000440653 RPL30P62888 115 aaKnown RBP7.54□□□□□ -1.2
HDAC6-209ENST00000440653 BTN1A1Q13410 526 aa7.54□□□□□ -1.2
HDAC6-209ENST00000440653 C17orf58Q2M2W7 97 aa7.54□□□□□ -1.2
HDAC6-209ENST00000440653 NCMAPQ5T1S8 102 aa7.54□□□□□ -1.2
HDAC6-209ENST00000440653 PRAMEF5Q5TYX0 476 aa7.54□□□□□ -1.2
HDAC6-209ENST00000440653 Q6ZRM9 215 aa7.54□□□□□ -1.2
HDAC6-209ENST00000440653 KRTAP1-3Q8IUG1 177 aa7.54□□□□□ -1.2
HDAC6-209ENST00000440653 ODF3L1Q8IXM7 274 aa7.54□□□□□ -1.2
HDAC6-209ENST00000440653 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.54□□□□□ -1.2
HDAC6-209ENST00000440653 ZNRF1Q8ND25 227 aa7.54□□□□□ -1.2
HDAC6-209ENST00000440653 S1PR3Q99500 378 aa7.54□□□□□ -1.2
HDAC6-209ENST00000440653 MS4A5Q9H3V2 200 aa7.54□□□□□ -1.2
HDAC6-209ENST00000440653 DYNLRB1Q9NP97 96 aa7.54□□□□□ -1.2
HDAC6-209ENST00000440653 HCFC1P51610 2035 aa7.54□□□□□ -1.2
HDAC6-209ENST00000440653 HRNRQ86YZ3 2850 aaPredicted RBP7.53□□□□□ -1.2
HDAC6-209ENST00000440653 LINC00473A8K010 186 aa7.53□□□□□ -1.2
HDAC6-209ENST00000440653 B9A039 149 aa7.53□□□□□ -1.2
HDAC6-209ENST00000440653 NDUFA2O43678 99 aa7.53□□□□□ -1.2
HDAC6-209ENST00000440653 MPDU1O75352 247 aa7.53□□□□□ -1.2
HDAC6-209ENST00000440653 RBMXL2O75526 392 aaKnown RBP7.53□□□□□ -1.2
HDAC6-209ENST00000440653 NXPH3O95157 252 aa7.53□□□□□ -1.2
HDAC6-209ENST00000440653 CYB5R3P00387 301 aaPredicted RBP7.53□□□□□ -1.2
HDAC6-209ENST00000440653 IFNA1P01562 189 aa7.53□□□□□ -1.2
HDAC6-209ENST00000440653 ARG1P05089 322 aa7.53□□□□□ -1.2
HDAC6-209ENST00000440653 METTL15P1P0C7V9 234 aa7.53□□□□□ -1.2
HDAC6-209ENST00000440653 SPCS3P61009 180 aa7.53□□□□□ -1.2
HDAC6-209ENST00000440653 POU2AF1Q16633 256 aa7.53□□□□□ -1.2
HDAC6-209ENST00000440653 VWC2Q2TAL6 325 aa7.53□□□□□ -1.2
HDAC6-209ENST00000440653 LRRC75BQ2VPJ9 315 aa7.53□□□□□ -1.2
HDAC6-209ENST00000440653 TMEM41BQ5BJD5 291 aa7.53□□□□□ -1.2
HDAC6-209ENST00000440653 OR2B11Q5JQS5 317 aa7.53□□□□□ -1.2
HDAC6-209ENST00000440653 SPANXN5Q5MJ07 72 aa7.53□□□□□ -1.2
HDAC6-209ENST00000440653 ADAM5Q6NVV9 412 aa7.53□□□□□ -1.2
HDAC6-209ENST00000440653 BTNL3Q6UXE8 466 aa7.53□□□□□ -1.2
HDAC6-209ENST00000440653 ZNF429Q86V71 674 aa7.53□□□□□ -1.2
HDAC6-209ENST00000440653 C8orf31Q8N9H6 132 aa7.53□□□□□ -1.2
HDAC6-209ENST00000440653 CLRN3Q8NCR9 226 aa7.53□□□□□ -1.2
HDAC6-209ENST00000440653 ZNF439Q8NDP4 499 aa7.53□□□□□ -1.2
HDAC6-209ENST00000440653 OR10G4Q8NGN3 311 aa7.53□□□□□ -1.2
HDAC6-209ENST00000440653 DDB2Q92466 427 aa7.53□□□□□ -1.2
HDAC6-209ENST00000440653 RNASE6Q93091 150 aaKnown RBP7.53□□□□□ -1.2
HDAC6-209ENST00000440653 ZNF251Q9BRH9 671 aa7.53□□□□□ -1.2
HDAC6-209ENST00000440653 GGACTQ9BVM4 153 aa7.53□□□□□ -1.2
HDAC6-209ENST00000440653 WDR61Q9GZS3 305 aaKnown RBP7.53□□□□□ -1.2
HDAC6-209ENST00000440653 MS4A7Q9GZW8 240 aaPredicted RBP7.53□□□□□ -1.2
HDAC6-209ENST00000440653 SLC35B3Q9H1N7 401 aa7.53□□□□□ -1.2
HDAC6-209ENST00000440653 COQ3Q9NZJ6 369 aa7.53□□□□□ -1.2
HDAC6-209ENST00000440653 PLA2G2EQ9NZK7 142 aa7.53□□□□□ -1.2
HDAC6-209ENST00000440653 NDRG3Q9UGV2 375 aa7.53□□□□□ -1.2
HDAC6-209ENST00000440653 RPUSD1Q9UJJ7 312 aaKnown RBP7.53□□□□□ -1.2
HDAC6-209ENST00000440653 USF3Q68DE3 2245 aa7.53□□□□□ -1.2
HDAC6-209ENST00000440653 PRR14LQ5THK1 2151 aa7.53□□□□□ -1.2
HDAC6-209ENST00000440653 PPIAL4EA0A075B759 164 aa7.52□□□□□ -1.21
HDAC6-209ENST00000440653 SAA2-SAA4A0A096LPE2 208 aa7.52□□□□□ -1.21
HDAC6-209ENST00000440653 TRBV23-1A0A0A0MS06 115 aa7.52□□□□□ -1.21
HDAC6-209ENST00000440653 UBE2L5PA0A1B0GUS4 154 aa7.52□□□□□ -1.21
HDAC6-209ENST00000440653 CEBPZOSA8MTT3 80 aa7.52□□□□□ -1.21
HDAC6-209ENST00000440653 SHISA9B4DS77 424 aa7.52□□□□□ -1.21
HDAC6-209ENST00000440653 C17orf112F2Z3M2 114 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms