RNA–Protein interactions for RNA: ENST00000440271.5

TRIM39-210, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-210ENST00000440271 LINC00473A8K010 186 aa15.34■□□□□ 0.05
TRIM39-210ENST00000440271 IGHV3-23P01764 117 aa15.34■□□□□ 0.05
TRIM39-210ENST00000440271 GSTT2P0CG29 244 aa15.34■□□□□ 0.05
TRIM39-210ENST00000440271 GSTT2BP0CG30 244 aa15.34■□□□□ 0.05
TRIM39-210ENST00000440271 ATF4P18848 351 aaPredicted RBP15.34■□□□□ 0.05
TRIM39-210ENST00000440271 DUTP33316 252 aaKnown RBP15.34■□□□□ 0.05
TRIM39-210ENST00000440271 ARL3P36405 182 aa15.34■□□□□ 0.05
TRIM39-210ENST00000440271 FAM106AQ4KMX7 169 aa15.34■□□□□ 0.05
TRIM39-210ENST00000440271 HSD17B12Q53GQ0 312 aa15.34■□□□□ 0.05
TRIM39-210ENST00000440271 PLAC9Q5JTB6 97 aa15.34■□□□□ 0.05
TRIM39-210ENST00000440271 LGALS9CQ6DKI2 356 aa15.34■□□□□ 0.05
TRIM39-210ENST00000440271 CEACAM19Q7Z692 300 aa15.34■□□□□ 0.05
TRIM39-210ENST00000440271 SLC25A42Q86VD7 318 aa15.34■□□□□ 0.05
TRIM39-210ENST00000440271 SETD9Q8NE22 299 aa15.34■□□□□ 0.05
TRIM39-210ENST00000440271 ADTRPQ96IZ2 230 aa15.34■□□□□ 0.05
TRIM39-210ENST00000440271 CABLES2Q9BTV7 478 aa15.34■□□□□ 0.05
TRIM39-210ENST00000440271 ZNF257Q9Y2Q1 563 aa15.34■□□□□ 0.05
TRIM39-210ENST00000440271 RBM7Q9Y580 266 aaKnown RBP15.34■□□□□ 0.05
TRIM39-210ENST00000440271 CREBL2O60519 120 aaPredicted RBP15.33■□□□□ 0.04
TRIM39-210ENST00000440271 SAA1P0DJI8 122 aaPredicted RBP15.33■□□□□ 0.04
TRIM39-210ENST00000440271 MAP2K4P45985 399 aa15.33■□□□□ 0.04
TRIM39-210ENST00000440271 CDK10Q15131 360 aa15.33■□□□□ 0.04
TRIM39-210ENST00000440271 CLEC19AQ6UXS0 136 aa15.33■□□□□ 0.04
TRIM39-210ENST00000440271 MMD2Q8IY49 270 aa15.33■□□□□ 0.04
TRIM39-210ENST00000440271 CCDC140Q96MF4 163 aa15.33■□□□□ 0.04
TRIM39-210ENST00000440271 PSORS1C1Q9UIG5 152 aa15.33■□□□□ 0.04
TRIM39-210ENST00000440271 HMX3A6NHT5 357 aa15.32■□□□□ 0.04
TRIM39-210ENST00000440271 A8MWP6 167 aa15.32■□□□□ 0.04
TRIM39-210ENST00000440271 APOC4P55056 127 aa15.32■□□□□ 0.04
TRIM39-210ENST00000440271 DEFB135Q30KP9 77 aa15.32■□□□□ 0.04
TRIM39-210ENST00000440271 BTNL8Q6UX41 500 aa15.32■□□□□ 0.04
TRIM39-210ENST00000440271 C19orf35Q6ZS72 473 aa15.32■□□□□ 0.04
TRIM39-210ENST00000440271 AHSA2Q719I0 299 aa15.32■□□□□ 0.04
TRIM39-210ENST00000440271 PLGRKTQ9HBL7 147 aa15.32■□□□□ 0.04
TRIM39-210ENST00000440271 S4R3C0 116 aa15.32■□□□□ 0.04
TRIM39-210ENST00000440271 SLC17A2O00624 439 aa15.31■□□□□ 0.04
TRIM39-210ENST00000440271 UCHL1P09936 223 aa15.31■□□□□ 0.04
TRIM39-210ENST00000440271 MRPS15P82914 257 aaKnown RBP15.31■□□□□ 0.04
TRIM39-210ENST00000440271 LAIR2Q6ISS4 152 aa15.31■□□□□ 0.04
TRIM39-210ENST00000440271 OR56B1Q8NGI3 324 aa15.31■□□□□ 0.04
TRIM39-210ENST00000440271 GFI1Q99684 422 aa15.31■□□□□ 0.04
TRIM39-210ENST00000440271 KCNK7Q9Y2U2 307 aa15.31■□□□□ 0.04
TRIM39-210ENST00000440271 TRAV25A0A0B4J276 109 aa15.3■□□□□ 0.04
TRIM39-210ENST00000440271 NPIPB5A8MRT5 1133 aa15.3■□□□□ 0.04
TRIM39-210ENST00000440271 TEX22C9J3V5 150 aa15.3■□□□□ 0.04
TRIM39-210ENST00000440271 UBE2CO00762 179 aa15.3■□□□□ 0.04
TRIM39-210ENST00000440271 DIRAS3O95661 229 aa15.3■□□□□ 0.04
TRIM39-210ENST00000440271 FCGR3AP08637 254 aa15.3■□□□□ 0.04
TRIM39-210ENST00000440271 OR4A47Q6IF82 309 aa15.3■□□□□ 0.04
TRIM39-210ENST00000440271 RBPMS2Q6ZRY4 209 aaKnown RBP15.3■□□□□ 0.04
TRIM39-210ENST00000440271 TMEM217Q8N7C4 229 aa15.3■□□□□ 0.04
TRIM39-210ENST00000440271 OR1L6Q8NGR2 347 aa15.3■□□□□ 0.04
TRIM39-210ENST00000440271 PHLDA1Q8WV24 401 aaPredicted RBP15.3■□□□□ 0.04
TRIM39-210ENST00000440271 FANCD2OSQ96PS1 177 aa15.3■□□□□ 0.04
TRIM39-210ENST00000440271 DCUN1D5Q9BTE7 237 aa15.3■□□□□ 0.04
TRIM39-210ENST00000440271 CDK1P06493 297 aa15.29■□□□□ 0.04
TRIM39-210ENST00000440271 IL6RP08887 468 aaPredicted RBP15.29■□□□□ 0.04
TRIM39-210ENST00000440271 RAB11BQ15907 218 aa15.29■□□□□ 0.04
TRIM39-210ENST00000440271 OR2C3Q8N628 320 aa15.29■□□□□ 0.04
TRIM39-210ENST00000440271 GATAD1Q8WUU5 269 aa15.29■□□□□ 0.04
TRIM39-210ENST00000440271 RNF183Q96D59 192 aa15.29■□□□□ 0.04
TRIM39-210ENST00000440271 GINS4Q9BRT9 223 aa15.29■□□□□ 0.04
TRIM39-210ENST00000440271 PLCXD1Q9NUJ7 323 aa15.29■□□□□ 0.04
TRIM39-210ENST00000440271 AK6Q9Y3D8 172 aaKnown RBP15.29■□□□□ 0.04
TRIM39-210ENST00000440271 HECTD4Q9Y4D8 3996 aa15.28■□□□□ 0.04
TRIM39-210ENST00000440271 DPPA5A6NC42 116 aa15.28■□□□□ 0.04
TRIM39-210ENST00000440271 FCGR3BO75015 233 aa15.28■□□□□ 0.04
TRIM39-210ENST00000440271 C8orf88P0DMB2 117 aa15.28■□□□□ 0.04
TRIM39-210ENST00000440271 CLDN12P56749 244 aa15.28■□□□□ 0.04
TRIM39-210ENST00000440271 ZNF585BQ52M93 769 aa15.28■□□□□ 0.04
TRIM39-210ENST00000440271 SLC38A6Q8IZM9 456 aa15.28■□□□□ 0.04
TRIM39-210ENST00000440271 DHRSXQ8N5I4 330 aa15.28■□□□□ 0.04
TRIM39-210ENST00000440271 MAFIPQ8WZ33 124 aa15.28■□□□□ 0.04
TRIM39-210ENST00000440271 EEF1AKMT3Q96AZ1 226 aa15.28■□□□□ 0.04
TRIM39-210ENST00000440271 OR51E2Q9H255 320 aa15.28■□□□□ 0.04
TRIM39-210ENST00000440271 SLC2A9Q9NRM0 540 aa15.28■□□□□ 0.04
TRIM39-210ENST00000440271 RYR1P21817 5038 aa15.27■□□□□ 0.04
TRIM39-210ENST00000440271 E7EUB6 86 aa15.27■□□□□ 0.04
TRIM39-210ENST00000440271 DENRO43583 198 aaKnown RBP15.27■□□□□ 0.04
TRIM39-210ENST00000440271 C2orf76Q3KRA6 126 aa15.27■□□□□ 0.04
TRIM39-210ENST00000440271 UNQ9165/PRO28630Q6UXU0 137 aa15.27■□□□□ 0.04
TRIM39-210ENST00000440271 H1FOOQ8IZA3 346 aaPredicted RBP15.27■□□□□ 0.04
TRIM39-210ENST00000440271 VKORC1L1Q8N0U8 176 aa15.27■□□□□ 0.04
TRIM39-210ENST00000440271 STPG3Q8N7X2 389 aa15.27■□□□□ 0.04
TRIM39-210ENST00000440271 BPIFB6Q8NFQ5 453 aa15.27■□□□□ 0.04
TRIM39-210ENST00000440271 MARC2Q969Z3 335 aa15.27■□□□□ 0.04
TRIM39-210ENST00000440271 FAM3DQ96BQ1 224 aa15.27■□□□□ 0.04
TRIM39-210ENST00000440271 FYTTD1Q96QD9 318 aaKnown RBP15.27■□□□□ 0.04
TRIM39-210ENST00000440271 UBQLN2Q9UHD9 624 aa15.27■□□□□ 0.04
TRIM39-210ENST00000440271 KIR2DL5BA0A0G2JN68 375 aa15.26■□□□□ 0.03
TRIM39-210ENST00000440271 KIR2DL5BA0A0G2JPC4 375 aa15.26■□□□□ 0.03
TRIM39-210ENST00000440271 CLEC3BP05452 202 aa15.26■□□□□ 0.03
TRIM39-210ENST00000440271 CRYGCP07315 174 aa15.26■□□□□ 0.03
TRIM39-210ENST00000440271 RPL27AP46776 148 aaKnown RBP15.26■□□□□ 0.03
TRIM39-210ENST00000440271 PLA2G7Q13093 441 aa15.26■□□□□ 0.03
TRIM39-210ENST00000440271 KLK9Q2XQG4 91 aa15.26■□□□□ 0.03
TRIM39-210ENST00000440271 KIR2DL5AQ8N109 375 aa15.26■□□□□ 0.03
TRIM39-210ENST00000440271 KIR2DL5BQ8NHK3 375 aa15.26■□□□□ 0.03
TRIM39-210ENST00000440271 RAB3CQ96E17 227 aa15.26■□□□□ 0.03
TRIM39-210ENST00000440271 MND1Q9BWT6 205 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms