RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 ITLN1Q8WWA0 313 aa11.82□□□□□ -0.52
LIMD1-202ENST00000440097 TMEM56Q96MV1 263 aa11.82□□□□□ -0.52
LIMD1-202ENST00000440097 WIPI2Q9Y4P8 454 aa11.82□□□□□ -0.52
LIMD1-202ENST00000440097 TMEM56-RWDD3S4R434 201 aa11.82□□□□□ -0.52
LIMD1-202ENST00000440097 C1QTNF9BB2RNN3 333 aa11.81□□□□□ -0.52
LIMD1-202ENST00000440097 C12orf77C9JDV5 145 aa11.81□□□□□ -0.52
LIMD1-202ENST00000440097 H0Y980 276 aa11.81□□□□□ -0.52
LIMD1-202ENST00000440097 C1QTNF9P0C862 333 aa11.81□□□□□ -0.52
LIMD1-202ENST00000440097 PSG2P11465 335 aa11.81□□□□□ -0.52
LIMD1-202ENST00000440097 SLC25A24Q6NUK1 477 aa11.81□□□□□ -0.52
LIMD1-202ENST00000440097 COQ2Q96H96 371 aa11.81□□□□□ -0.52
LIMD1-202ENST00000440097 TRGV8A0A0C4DH27 118 aa11.81□□□□□ -0.52
LIMD1-202ENST00000440097 OOEPA6NGQ2 149 aa11.81□□□□□ -0.52
LIMD1-202ENST00000440097 H3BP45 60 aa11.81□□□□□ -0.52
LIMD1-202ENST00000440097 HBZP02008 142 aa11.81□□□□□ -0.52
LIMD1-202ENST00000440097 VDAC1P21796 283 aa11.81□□□□□ -0.52
LIMD1-202ENST00000440097 UCP1P25874 307 aa11.81□□□□□ -0.52
LIMD1-202ENST00000440097 SSTR5P35346 364 aa11.81□□□□□ -0.52
LIMD1-202ENST00000440097 CD177Q8N6Q3 437 aa11.81□□□□□ -0.52
LIMD1-202ENST00000440097 OR52L2PQ8NGH6 319 aa11.81□□□□□ -0.52
LIMD1-202ENST00000440097 VSIRQ9H7M9 311 aa11.81□□□□□ -0.52
LIMD1-202ENST00000440097 RPRMQ9NS64 109 aa11.81□□□□□ -0.52
LIMD1-202ENST00000440097 GCGP01275 180 aa11.8□□□□□ -0.52
LIMD1-202ENST00000440097 ID3Q02535 119 aa11.8□□□□□ -0.52
LIMD1-202ENST00000440097 FAM201AQ5SY85 155 aa11.8□□□□□ -0.52
LIMD1-202ENST00000440097 SLC35E4Q6ICL7 350 aa11.8□□□□□ -0.52
LIMD1-202ENST00000440097 FAM53AQ6NSI3 398 aaPredicted RBP11.8□□□□□ -0.52
LIMD1-202ENST00000440097 SSX7Q7RTT5 188 aa11.8□□□□□ -0.52
LIMD1-202ENST00000440097 ZNF808Q8N4W9 903 aaPredicted RBP11.8□□□□□ -0.52
LIMD1-202ENST00000440097 RSG1Q9BU20 258 aa11.8□□□□□ -0.52
LIMD1-202ENST00000440097 SNHG12Q9BXW3 62 aa11.8□□□□□ -0.52
LIMD1-202ENST00000440097 CTDSP1Q9GZU7 261 aa11.8□□□□□ -0.52
LIMD1-202ENST00000440097 LAMP3Q9UQV4 416 aa11.8□□□□□ -0.52
LIMD1-202ENST00000440097 IGHV3-43A0A0B4J1X8 118 aa11.8□□□□□ -0.52
LIMD1-202ENST00000440097 OR4A8P0C604 315 aa11.8□□□□□ -0.52
LIMD1-202ENST00000440097 IGHV3-43DP0DP04 118 aa11.8□□□□□ -0.52
LIMD1-202ENST00000440097 PAX9P55771 341 aa11.8□□□□□ -0.52
LIMD1-202ENST00000440097 EDDM3BP56851 147 aa11.8□□□□□ -0.52
LIMD1-202ENST00000440097 TNFAIP6P98066 277 aaPredicted RBP11.8□□□□□ -0.52
LIMD1-202ENST00000440097 ZNF726P1Q15940 193 aa11.8□□□□□ -0.52
LIMD1-202ENST00000440097 C16orf82Q7Z2V1 217 aa11.8□□□□□ -0.52
LIMD1-202ENST00000440097 PLPPR2Q96GM1 343 aa11.8□□□□□ -0.52
LIMD1-202ENST00000440097 ABHD14BQ96IU4 210 aa11.8□□□□□ -0.52
LIMD1-202ENST00000440097 OR2D2Q9H210 308 aa11.8□□□□□ -0.52
LIMD1-202ENST00000440097 PKDREJQ9NTG1 2253 aa11.8□□□□□ -0.52
LIMD1-202ENST00000440097 CEBPZOSA8MTT3 80 aa11.79□□□□□ -0.52
LIMD1-202ENST00000440097 SRRM5B3KS81 715 aa11.79□□□□□ -0.52
LIMD1-202ENST00000440097 IFNL4K9M1U5 179 aa11.79□□□□□ -0.52
LIMD1-202ENST00000440097 TMEM267Q0VDI3 215 aaPredicted RBP11.79□□□□□ -0.52
LIMD1-202ENST00000440097 ADIRFQ15847 76 aa11.79□□□□□ -0.52
LIMD1-202ENST00000440097 NMSQ5H8A3 153 aa11.79□□□□□ -0.52
LIMD1-202ENST00000440097 GCSAMQ8N6F7 178 aa11.79□□□□□ -0.52
LIMD1-202ENST00000440097 ZNRF1Q8ND25 227 aa11.79□□□□□ -0.52
LIMD1-202ENST00000440097 OR5D13Q8NGL4 314 aa11.79□□□□□ -0.52
LIMD1-202ENST00000440097 RND1Q92730 232 aa11.79□□□□□ -0.52
LIMD1-202ENST00000440097 DCTN5Q9BTE1 182 aa11.79□□□□□ -0.52
LIMD1-202ENST00000440097 ELOVL5Q9NYP7 299 aa11.79□□□□□ -0.52
LIMD1-202ENST00000440097 AKAP6Q13023 2319 aa11.79□□□□□ -0.52
LIMD1-202ENST00000440097 MAP1AP78559 2803 aaPredicted RBP11.79□□□□□ -0.52
LIMD1-202ENST00000440097 DEFB108AA8MXU0 73 aa11.79□□□□□ -0.52
LIMD1-202ENST00000440097 NPIPB11E5RHQ5 1161 aa11.79□□□□□ -0.52
LIMD1-202ENST00000440097 IFNA5P01569 189 aa11.79□□□□□ -0.52
LIMD1-202ENST00000440097 PFN1P07737 140 aaKnown RBP11.79□□□□□ -0.52
LIMD1-202ENST00000440097 C3orf36Q3SXR2 165 aa11.79□□□□□ -0.52
LIMD1-202ENST00000440097 ZNF66Q6ZN08 573 aa11.79□□□□□ -0.52
LIMD1-202ENST00000440097 DEFB108BQ8NET1 73 aa11.79□□□□□ -0.52
LIMD1-202ENST00000440097 OR13A1Q8NGR1 328 aa11.79□□□□□ -0.52
LIMD1-202ENST00000440097 PRR7Q8TB68 274 aa11.79□□□□□ -0.52
LIMD1-202ENST00000440097 RALYQ9UKM9 306 aaKnown RBP11.79□□□□□ -0.52
LIMD1-202ENST00000440097 GZMHP20718 246 aa11.79□□□□□ -0.52
LIMD1-202ENST00000440097 TNFSF4P23510 183 aa11.79□□□□□ -0.52
LIMD1-202ENST00000440097 IZUMO4Q1ZYL8 232 aa11.79□□□□□ -0.52
LIMD1-202ENST00000440097 CLEC12BQ2HXU8 276 aa11.79□□□□□ -0.52
LIMD1-202ENST00000440097 COA6Q5JTJ3 125 aaKnown RBP11.79□□□□□ -0.52
LIMD1-202ENST00000440097 RNF115Q9Y4L5 304 aa11.79□□□□□ -0.52
LIMD1-202ENST00000440097 LRBAP50851 2863 aa11.78□□□□□ -0.52
LIMD1-202ENST00000440097 IGLV3-9A0A075B6K5 115 aa11.78□□□□□ -0.52
LIMD1-202ENST00000440097 IGKV1D-17A0A075B6S4 117 aa11.78□□□□□ -0.52
LIMD1-202ENST00000440097 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.78□□□□□ -0.52
LIMD1-202ENST00000440097 SOX15O60248 233 aa11.78□□□□□ -0.52
LIMD1-202ENST00000440097 UCNP55089 124 aa11.78□□□□□ -0.52
LIMD1-202ENST00000440097 BSPH1Q075Z2 132 aa11.78□□□□□ -0.52
LIMD1-202ENST00000440097 PMS2P11Q13670 270 aa11.78□□□□□ -0.52
LIMD1-202ENST00000440097 DRAM1Q8N682 238 aa11.78□□□□□ -0.52
LIMD1-202ENST00000440097 CLEC18AA5D8T8 446 aa11.78□□□□□ -0.52
LIMD1-202ENST00000440097 SPINT2O43291 252 aa11.78□□□□□ -0.52
LIMD1-202ENST00000440097 CCL8P80075 99 aa11.78□□□□□ -0.52
LIMD1-202ENST00000440097 PAX5Q02548 391 aa11.78□□□□□ -0.52
LIMD1-202ENST00000440097 NCR3LG1Q68D85 454 aa11.78□□□□□ -0.52
LIMD1-202ENST00000440097 CLEC18CQ8NCF0 446 aa11.78□□□□□ -0.52
LIMD1-202ENST00000440097 PPP1R35Q8TAP8 253 aa11.78□□□□□ -0.52
LIMD1-202ENST00000440097 PYGO2Q9BRQ0 406 aa11.78□□□□□ -0.52
LIMD1-202ENST00000440097 CBLN4Q9NTU7 201 aa11.78□□□□□ -0.52
LIMD1-202ENST00000440097 LIN7CQ9NUP9 197 aaKnown RBP11.78□□□□□ -0.52
LIMD1-202ENST00000440097 VAX2Q9UIW0 290 aa11.78□□□□□ -0.52
LIMD1-202ENST00000440097 IGLV2-14P01704 120 aa11.77□□□□□ -0.53
LIMD1-202ENST00000440097 P2RX4Q99571 388 aa11.77□□□□□ -0.53
LIMD1-202ENST00000440097 SMIM7Q9BQ49 75 aa11.77□□□□□ -0.53
LIMD1-202ENST00000440097 ZNF835Q9Y2P0 537 aa11.77□□□□□ -0.53
LIMD1-202ENST00000440097 PPP5D1E7EU14 171 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms