RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 UFSP2Q9NUQ7 469 aa13.64□□□□□ -0.23
CLCNKA-203ENST00000439316 WDR83OSQ9Y284 106 aa13.64□□□□□ -0.23
CLCNKA-203ENST00000439316 DIDO1Q9BTC0 2240 aaKnown RBP13.64□□□□□ -0.23
CLCNKA-203ENST00000439316 IGHV3-43A0A0B4J1X8 118 aa13.63□□□□□ -0.23
CLCNKA-203ENST00000439316 ST8SIA5O15466 376 aa13.63□□□□□ -0.23
CLCNKA-203ENST00000439316 ZZEF1O43149 2961 aa13.63□□□□□ -0.23
CLCNKA-203ENST00000439316 GGCTO75223 188 aaKnown RBP13.63□□□□□ -0.23
CLCNKA-203ENST00000439316 IGHV3-43DP0DP04 118 aa13.63□□□□□ -0.23
CLCNKA-203ENST00000439316 LINC00205P59089 165 aa13.63□□□□□ -0.23
CLCNKA-203ENST00000439316 PKIAP61925 76 aa13.63□□□□□ -0.23
CLCNKA-203ENST00000439316 PAX5Q02548 391 aa13.63□□□□□ -0.23
CLCNKA-203ENST00000439316 TMEM249Q2WGJ8 235 aa13.63□□□□□ -0.23
CLCNKA-203ENST00000439316 FAM214BQ7L5A3 538 aa13.63□□□□□ -0.23
CLCNKA-203ENST00000439316 TMEM170AQ8WVE7 144 aa13.63□□□□□ -0.23
CLCNKA-203ENST00000439316 PCGF1Q9BSM1 259 aa13.63□□□□□ -0.23
CLCNKA-203ENST00000439316 QTRT1Q9BXR0 403 aaKnown RBP13.63□□□□□ -0.23
CLCNKA-203ENST00000439316 PSG11Q9UQ72 335 aa13.63□□□□□ -0.23
CLCNKA-203ENST00000439316 DSPP15924 2871 aaKnown RBP13.63□□□□□ -0.23
CLCNKA-203ENST00000439316 C15orf65H3BRN8 121 aa13.63□□□□□ -0.23
CLCNKA-203ENST00000439316 DVL1O14640 695 aa13.63□□□□□ -0.23
CLCNKA-203ENST00000439316 RBMXL2O75526 392 aaKnown RBP13.63□□□□□ -0.23
CLCNKA-203ENST00000439316 AMBPP02760 352 aa13.63□□□□□ -0.23
CLCNKA-203ENST00000439316 TYMSP04818 313 aa13.63□□□□□ -0.23
CLCNKA-203ENST00000439316 KITLGP21583 273 aa13.63□□□□□ -0.23
CLCNKA-203ENST00000439316 NPPCP23582 126 aa13.63□□□□□ -0.23
CLCNKA-203ENST00000439316 SRP14P37108 136 aaKnown RBP13.63□□□□□ -0.23
CLCNKA-203ENST00000439316 HTD2P86397 168 aa13.63□□□□□ -0.23
CLCNKA-203ENST00000439316 SMIM21Q3B7S5 101 aa13.63□□□□□ -0.23
CLCNKA-203ENST00000439316 Q6ZS92 163 aa13.63□□□□□ -0.23
CLCNKA-203ENST00000439316 TPRX1Q8N7U7 411 aa13.63□□□□□ -0.23
CLCNKA-203ENST00000439316 RBMXL3Q8N7X1 1067 aaKnown RBP13.63□□□□□ -0.23
CLCNKA-203ENST00000439316 R3HDM4Q96D70 268 aa13.63□□□□□ -0.23
CLCNKA-203ENST00000439316 TLN1Q9Y490 2541 aaKnown RBP13.62□□□□□ -0.23
CLCNKA-203ENST00000439316 C11orf94C9JXX5 98 aa13.62□□□□□ -0.23
CLCNKA-203ENST00000439316 MKRN2OSH3BPM6 223 aa13.62□□□□□ -0.23
CLCNKA-203ENST00000439316 OR9G9P0C7N8 305 aa13.62□□□□□ -0.23
CLCNKA-203ENST00000439316 DEFA4P12838 97 aa13.62□□□□□ -0.23
CLCNKA-203ENST00000439316 FOXF2Q12947 444 aa13.62□□□□□ -0.23
CLCNKA-203ENST00000439316 JOSD1Q15040 202 aaPredicted RBP13.62□□□□□ -0.23
CLCNKA-203ENST00000439316 ACTL10Q5JWF8 245 aa13.62□□□□□ -0.23
CLCNKA-203ENST00000439316 TRAT1Q6PIZ9 186 aa13.62□□□□□ -0.23
CLCNKA-203ENST00000439316 RAB1CQ92928 201 aa13.62□□□□□ -0.23
CLCNKA-203ENST00000439316 ACY3Q96HD9 319 aa13.62□□□□□ -0.23
CLCNKA-203ENST00000439316 C14orf144Q96I85 54 aa13.62□□□□□ -0.23
CLCNKA-203ENST00000439316 OR6C3Q9NZP0 311 aa13.62□□□□□ -0.23
CLCNKA-203ENST00000439316 A0A1W2PPQ1 181 aa13.62□□□□□ -0.23
CLCNKA-203ENST00000439316 XKRY2A2RUG3 117 aa13.62□□□□□ -0.23
CLCNKA-203ENST00000439316 FAM90A9PA6NNJ1 464 aa13.62□□□□□ -0.23
CLCNKA-203ENST00000439316 K7ENP7 123 aa13.62□□□□□ -0.23
CLCNKA-203ENST00000439316 TIMM8AO60220 97 aaPredicted RBP13.62□□□□□ -0.23
CLCNKA-203ENST00000439316 AGFG2O95081 481 aa13.62□□□□□ -0.23
CLCNKA-203ENST00000439316 LY86O95711 162 aa13.62□□□□□ -0.23
CLCNKA-203ENST00000439316 PDLIM4P50479 330 aa13.62□□□□□ -0.23
CLCNKA-203ENST00000439316 P2RY6Q15077 328 aa13.62□□□□□ -0.23
CLCNKA-203ENST00000439316 DKK4Q9UBT3 224 aa13.62□□□□□ -0.23
CLCNKA-203ENST00000439316 DEFB108AA8MXU0 73 aa13.61□□□□□ -0.23
CLCNKA-203ENST00000439316 SPINT2O43291 252 aa13.61□□□□□ -0.23
CLCNKA-203ENST00000439316 SOX15O60248 233 aa13.61□□□□□ -0.23
CLCNKA-203ENST00000439316 IFNA10P01566 189 aa13.61□□□□□ -0.23
CLCNKA-203ENST00000439316 ADH4P08319 380 aa13.61□□□□□ -0.23
CLCNKA-203ENST00000439316 PAX1P15863 534 aa13.61□□□□□ -0.23
CLCNKA-203ENST00000439316 DUTP33316 252 aaKnown RBP13.61□□□□□ -0.23
CLCNKA-203ENST00000439316 CD177Q8N6Q3 437 aa13.61□□□□□ -0.23
CLCNKA-203ENST00000439316 C1orf162Q8NEQ5 155 aaPredicted RBP13.61□□□□□ -0.23
CLCNKA-203ENST00000439316 OR2T10Q8NGZ9 312 aa13.61□□□□□ -0.23
CLCNKA-203ENST00000439316 RFESDQ8TAC1 157 aa13.61□□□□□ -0.23
CLCNKA-203ENST00000439316 ABHD17AQ96GS6 310 aa13.61□□□□□ -0.23
CLCNKA-203ENST00000439316 RHOVQ96L33 236 aa13.61□□□□□ -0.23
CLCNKA-203ENST00000439316 TRIB1Q96RU8 372 aa13.61□□□□□ -0.23
CLCNKA-203ENST00000439316 TUBG2Q9NRH3 451 aa13.61□□□□□ -0.23
CLCNKA-203ENST00000439316 TSTD3H0UI37 97 aa13.6□□□□□ -0.23
CLCNKA-203ENST00000439316 AQP7O14520 342 aa13.6□□□□□ -0.23
CLCNKA-203ENST00000439316 TMPRSS2O15393 492 aa13.6□□□□□ -0.23
CLCNKA-203ENST00000439316 PDE6DO43924 150 aa13.6□□□□□ -0.23
CLCNKA-203ENST00000439316 CD1BP29016 333 aa13.6□□□□□ -0.23
CLCNKA-203ENST00000439316 DDTP30046 118 aa13.6□□□□□ -0.23
CLCNKA-203ENST00000439316 HOXC12P31275 282 aa13.6□□□□□ -0.23
CLCNKA-203ENST00000439316 DCTN5Q9BTE1 182 aa13.6□□□□□ -0.23
CLCNKA-203ENST00000439316 DOCK11Q5JSL3 2073 aa13.6□□□□□ -0.23
CLCNKA-203ENST00000439316 A0A1B0GWJ7 208 aa13.6□□□□□ -0.23
CLCNKA-203ENST00000439316 CECR9P0C854 216 aa13.6□□□□□ -0.23
CLCNKA-203ENST00000439316 CD99P14209 185 aa13.6□□□□□ -0.23
CLCNKA-203ENST00000439316 GNB1P62873 340 aa13.6□□□□□ -0.23
CLCNKA-203ENST00000439316 REC114Q7Z4M0 266 aa13.6□□□□□ -0.23
CLCNKA-203ENST00000439316 CISD2Q8N5K1 135 aaKnown RBP13.6□□□□□ -0.23
CLCNKA-203ENST00000439316 MSL2Q9HCI7 577 aa13.6□□□□□ -0.23
CLCNKA-203ENST00000439316 MPDU1O75352 247 aa13.59□□□□□ -0.23
CLCNKA-203ENST00000439316 PROP1O75360 226 aa13.59□□□□□ -0.23
CLCNKA-203ENST00000439316 GZMBP10144 247 aa13.59□□□□□ -0.23
CLCNKA-203ENST00000439316 KIR2DL2P43627 348 aaPredicted RBP13.59□□□□□ -0.23
CLCNKA-203ENST00000439316 GPR12P47775 334 aa13.59□□□□□ -0.23
CLCNKA-203ENST00000439316 LCN2P80188 198 aa13.59□□□□□ -0.23
CLCNKA-203ENST00000439316 TBR1Q16650 682 aa13.59□□□□□ -0.23
CLCNKA-203ENST00000439316 CLEC12BQ2HXU8 276 aa13.59□□□□□ -0.23
CLCNKA-203ENST00000439316 GCSAMLQ5JQS6 135 aa13.59□□□□□ -0.23
CLCNKA-203ENST00000439316 KCNIP4Q6PIL6 250 aa13.59□□□□□ -0.23
CLCNKA-203ENST00000439316 LINC01551Q86U37 167 aa13.59□□□□□ -0.23
CLCNKA-203ENST00000439316 CNEP1R1Q8N9A8 125 aa13.59□□□□□ -0.23
CLCNKA-203ENST00000439316 FAM216AQ8WUB2 273 aa13.59□□□□□ -0.23
CLCNKA-203ENST00000439316 KCNIP2Q9NS61 270 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms