RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 RRHO14718 337 aa11.34□□□□□ -0.59
PCNX3-202ENST00000439247 MRPL33O75394 65 aaKnown RBP11.34□□□□□ -0.59
PCNX3-202ENST00000439247 KITLGP21583 273 aa11.34□□□□□ -0.59
PCNX3-202ENST00000439247 NBL1P41271 181 aa11.34□□□□□ -0.59
PCNX3-202ENST00000439247 KRTCAP3Q53RY4 240 aa11.34□□□□□ -0.59
PCNX3-202ENST00000439247 PIP4P1Q86T03 277 aa11.34□□□□□ -0.59
PCNX3-202ENST00000439247 TUSC5Q8IXB3 177 aa11.34□□□□□ -0.59
PCNX3-202ENST00000439247 OR52L2PQ8NGH6 319 aa11.34□□□□□ -0.59
PCNX3-202ENST00000439247 PLPPR2Q96GM1 343 aa11.34□□□□□ -0.59
PCNX3-202ENST00000439247 VAMP8Q9BV40 100 aa11.34□□□□□ -0.59
PCNX3-202ENST00000439247 MDFIC2A0A1B0GVS7 189 aa11.33□□□□□ -0.6
PCNX3-202ENST00000439247 IL6RP08887 468 aaPredicted RBP11.33□□□□□ -0.6
PCNX3-202ENST00000439247 CRISP2P16562 243 aa11.33□□□□□ -0.6
PCNX3-202ENST00000439247 KRTDAPP60985 99 aa11.33□□□□□ -0.6
PCNX3-202ENST00000439247 SLC35B1P78383 322 aa11.33□□□□□ -0.6
PCNX3-202ENST00000439247 PSG7Q13046 419 aa11.33□□□□□ -0.6
PCNX3-202ENST00000439247 MRPL18Q9H0U6 180 aaKnown RBP11.33□□□□□ -0.6
PCNX3-202ENST00000439247 PPP1R14DQ9NXH3 145 aa11.33□□□□□ -0.6
PCNX3-202ENST00000439247 FBXL7Q9UJT9 491 aa11.33□□□□□ -0.6
PCNX3-202ENST00000439247 SIAH2O43255 324 aa11.33□□□□□ -0.6
PCNX3-202ENST00000439247 MT-CO3P00414 261 aa11.33□□□□□ -0.6
PCNX3-202ENST00000439247 SERPINA7P05543 415 aa11.33□□□□□ -0.6
PCNX3-202ENST00000439247 ARL14EPLP0DKL9 152 aa11.33□□□□□ -0.6
PCNX3-202ENST00000439247 IER3P46695 156 aa11.33□□□□□ -0.6
PCNX3-202ENST00000439247 ZNF90Q03938 601 aa11.33□□□□□ -0.6
PCNX3-202ENST00000439247 FOXL1Q12952 345 aa11.33□□□□□ -0.6
PCNX3-202ENST00000439247 KIAA1644Q3SXP7 199 aa11.33□□□□□ -0.6
PCNX3-202ENST00000439247 RIPPLY2Q5TAB7 128 aa11.33□□□□□ -0.6
PCNX3-202ENST00000439247 ASPHD1Q5U4P2 390 aa11.33□□□□□ -0.6
PCNX3-202ENST00000439247 BAGE3Q86Y29 109 aa11.33□□□□□ -0.6
PCNX3-202ENST00000439247 BAGE2Q86Y30 109 aa11.33□□□□□ -0.6
PCNX3-202ENST00000439247 PRR7Q8TB68 274 aa11.33□□□□□ -0.6
PCNX3-202ENST00000439247 SAMD10Q9BYL1 202 aa11.33□□□□□ -0.6
PCNX3-202ENST00000439247 FOXJ2Q9P0K8 574 aa11.33□□□□□ -0.6
PCNX3-202ENST00000439247 TNRC6AQ8NDV7 1962 aaKnown RBP11.33□□□□□ -0.6
PCNX3-202ENST00000439247 TRBV6-6A0A0A6YYG2 114 aa11.33□□□□□ -0.6
PCNX3-202ENST00000439247 IGHEP01854 428 aa11.33□□□□□ -0.6
PCNX3-202ENST00000439247 CELA3AP09093 270 aa11.33□□□□□ -0.6
PCNX3-202ENST00000439247 GDF1P27539 372 aa11.33□□□□□ -0.6
PCNX3-202ENST00000439247 SRD5A2P31213 254 aa11.33□□□□□ -0.6
PCNX3-202ENST00000439247 TPPP2P59282 170 aa11.33□□□□□ -0.6
PCNX3-202ENST00000439247 MSMO1Q15800 293 aa11.33□□□□□ -0.6
PCNX3-202ENST00000439247 ASCL5Q7RTU5 278 aa11.33□□□□□ -0.6
PCNX3-202ENST00000439247 TIPARPQ7Z3E1 657 aaKnown RBP11.33□□□□□ -0.6
PCNX3-202ENST00000439247 WDR86Q86TI4 376 aa11.33□□□□□ -0.6
PCNX3-202ENST00000439247 C11orf42Q8N5U0 333 aa11.33□□□□□ -0.6
PCNX3-202ENST00000439247 C20orf144Q9BQM9 153 aa11.33□□□□□ -0.6
PCNX3-202ENST00000439247 TRAV34A0A0B4J273 112 aa11.32□□□□□ -0.6
PCNX3-202ENST00000439247 C9orf172C9J069 976 aa11.32□□□□□ -0.6
PCNX3-202ENST00000439247 K7EN84 100 aa11.32□□□□□ -0.6
PCNX3-202ENST00000439247 M0QZK8 103 aa11.32□□□□□ -0.6
PCNX3-202ENST00000439247 AKAP13Q12802 2813 aa11.32□□□□□ -0.6
PCNX3-202ENST00000439247 PRR14LQ5THK1 2151 aa11.32□□□□□ -0.6
PCNX3-202ENST00000439247 LOC102723996A0A087X1L8 192 aa11.32□□□□□ -0.6
PCNX3-202ENST00000439247 IGHV3-43A0A0B4J1X8 118 aa11.32□□□□□ -0.6
PCNX3-202ENST00000439247 SYNGR4O95473 234 aa11.32□□□□□ -0.6
PCNX3-202ENST00000439247 P04436 131 aa11.32□□□□□ -0.6
PCNX3-202ENST00000439247 IGHV3-43DP0DP04 118 aa11.32□□□□□ -0.6
PCNX3-202ENST00000439247 TIMP3P35625 211 aa11.32□□□□□ -0.6
PCNX3-202ENST00000439247 ZNF497Q6ZNH5 498 aa11.32□□□□□ -0.6
PCNX3-202ENST00000439247 TPRX1Q8N7U7 411 aa11.32□□□□□ -0.6
PCNX3-202ENST00000439247 APOBEC3DQ96AK3 386 aaPredicted RBP11.32□□□□□ -0.6
PCNX3-202ENST00000439247 DNAJC4Q9NNZ3 241 aa11.32□□□□□ -0.6
PCNX3-202ENST00000439247 CBY1Q9Y3M2 126 aa11.32□□□□□ -0.6
PCNX3-202ENST00000439247 DEFB108AA8MXU0 73 aa11.31□□□□□ -0.6
PCNX3-202ENST00000439247 AQP7O14520 342 aa11.31□□□□□ -0.6
PCNX3-202ENST00000439247 TMPRSS2O15393 492 aa11.31□□□□□ -0.6
PCNX3-202ENST00000439247 CLDN14O95500 239 aa11.31□□□□□ -0.6
PCNX3-202ENST00000439247 RAB7AP51149 207 aa11.31□□□□□ -0.6
PCNX3-202ENST00000439247 UBE2NP61088 152 aaKnown RBP11.31□□□□□ -0.6
PCNX3-202ENST00000439247 TMEM183BQ1AE95 376 aa11.31□□□□□ -0.6
PCNX3-202ENST00000439247 OR5AU1Q8NGC0 362 aa11.31□□□□□ -0.6
PCNX3-202ENST00000439247 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.31□□□□□ -0.6
PCNX3-202ENST00000439247 A0A1W2PPV4 95 aa11.31□□□□□ -0.6
PCNX3-202ENST00000439247 ANKRD30BLA7E2S9 258 aa11.31□□□□□ -0.6
PCNX3-202ENST00000439247 FCN1O00602 326 aa11.31□□□□□ -0.6
PCNX3-202ENST00000439247 YPEL3P61236 119 aaPredicted RBP11.31□□□□□ -0.6
PCNX3-202ENST00000439247 GNG3P63215 75 aa11.31□□□□□ -0.6
PCNX3-202ENST00000439247 GAGE1Q13065 139 aa11.31□□□□□ -0.6
PCNX3-202ENST00000439247 DCAF12Q5T6F0 453 aa11.31□□□□□ -0.6
PCNX3-202ENST00000439247 STPG4Q8N801 248 aa11.31□□□□□ -0.6
PCNX3-202ENST00000439247 OR10G8Q8NGN5 311 aa11.31□□□□□ -0.6
PCNX3-202ENST00000439247 OR1L6Q8NGR2 347 aa11.31□□□□□ -0.6
PCNX3-202ENST00000439247 YTHDF2Q9Y5A9 579 aaKnown RBP11.31□□□□□ -0.6
PCNX3-202ENST00000439247 CDIPTO14735 213 aa11.31□□□□□ -0.6
PCNX3-202ENST00000439247 PDE6DO43924 150 aa11.31□□□□□ -0.6
PCNX3-202ENST00000439247 Q0VFX4 171 aa11.31□□□□□ -0.6
PCNX3-202ENST00000439247 C3AR1Q16581 482 aa11.31□□□□□ -0.6
PCNX3-202ENST00000439247 MIC13Q5XKP0 118 aa11.31□□□□□ -0.6
PCNX3-202ENST00000439247 CXorf67Q86X51 503 aaPredicted RBP11.31□□□□□ -0.6
PCNX3-202ENST00000439247 BTF3L4Q96K17 158 aa11.31□□□□□ -0.6
PCNX3-202ENST00000439247 QTRT1Q9BXR0 403 aaKnown RBP11.31□□□□□ -0.6
PCNX3-202ENST00000439247 ZNF703Q9H7S9 590 aaPredicted RBP11.31□□□□□ -0.6
PCNX3-202ENST00000439247 LRP5LA4QPB2 252 aa11.3□□□□□ -0.6
PCNX3-202ENST00000439247 C15orf62A8K5M9 175 aa11.3□□□□□ -0.6
PCNX3-202ENST00000439247 FAM90A26D6RGX4 464 aa11.3□□□□□ -0.6
PCNX3-202ENST00000439247 PSPNO60542 156 aa11.3□□□□□ -0.6
PCNX3-202ENST00000439247 P0C879 139 aa11.3□□□□□ -0.6
PCNX3-202ENST00000439247 ALKBH6Q3KRA9 238 aa11.3□□□□□ -0.6
PCNX3-202ENST00000439247 SPATA31B1PQ5VZV4 182 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms