RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 GOSR2O14653 212 aa16.61■□□□□ 0.25
CHD3-204ENST00000439235 KRASP01116 189 aa16.61■□□□□ 0.25
CHD3-204ENST00000439235 TMEM11P17152 192 aa16.61■□□□□ 0.25
CHD3-204ENST00000439235 G6PCP35575 357 aa16.61■□□□□ 0.25
CHD3-204ENST00000439235 POU2AF1Q16633 256 aa16.61■□□□□ 0.25
CHD3-204ENST00000439235 ZDHHC16Q969W1 377 aa16.61■□□□□ 0.25
CHD3-204ENST00000439235 SEC22AQ96IW7 307 aa16.61■□□□□ 0.25
CHD3-204ENST00000439235 EAF1Q96JC9 268 aaPredicted RBP16.61■□□□□ 0.25
CHD3-204ENST00000439235 RHOVQ96L33 236 aa16.61■□□□□ 0.25
CHD3-204ENST00000439235 SSX3Q99909 188 aa16.61■□□□□ 0.25
CHD3-204ENST00000439235 SETD2Q9BYW2 2564 aaPredicted RBP16.61■□□□□ 0.25
CHD3-204ENST00000439235 MDFIC2A0A1B0GVS7 189 aa16.6■□□□□ 0.25
CHD3-204ENST00000439235 ADAP1O75689 374 aa16.6■□□□□ 0.25
CHD3-204ENST00000439235 SPDEFO95238 335 aa16.6■□□□□ 0.25
CHD3-204ENST00000439235 IGKV1-5P01602 117 aa16.6■□□□□ 0.25
CHD3-204ENST00000439235 SULT1A3P0DMM9 295 aa16.6■□□□□ 0.25
CHD3-204ENST00000439235 SULT1A4P0DMN0 295 aa16.6■□□□□ 0.25
CHD3-204ENST00000439235 HLA-GP17693 338 aa16.6■□□□□ 0.25
CHD3-204ENST00000439235 CD24P25063 80 aa16.6■□□□□ 0.25
CHD3-204ENST00000439235 VMA21Q3ZAQ7 101 aa16.6■□□□□ 0.25
CHD3-204ENST00000439235 GGNBP1Q5YKI7 109 aa16.6■□□□□ 0.25
CHD3-204ENST00000439235 H2BFWTQ7Z2G1 175 aa16.6■□□□□ 0.25
CHD3-204ENST00000439235 CADM3Q8N126 398 aa16.6■□□□□ 0.25
CHD3-204ENST00000439235 VSTM2AQ8TAG5 236 aa16.6■□□□□ 0.25
CHD3-204ENST00000439235 SPIN2AQ99865 258 aa16.6■□□□□ 0.25
CHD3-204ENST00000439235 SPIN2BQ9BPZ2 258 aa16.6■□□□□ 0.25
CHD3-204ENST00000439235 MMP24Q9Y5R2 645 aa16.6■□□□□ 0.25
CHD3-204ENST00000439235 HMX3A6NHT5 357 aa16.59■□□□□ 0.25
CHD3-204ENST00000439235 TRAPPC2P0DI81 140 aa16.59■□□□□ 0.25
CHD3-204ENST00000439235 TRAPPC2BP0DI82 140 aa16.59■□□□□ 0.25
CHD3-204ENST00000439235 BCAP31P51572 246 aa16.59■□□□□ 0.25
CHD3-204ENST00000439235 FCN2Q15485 313 aa16.59■□□□□ 0.25
CHD3-204ENST00000439235 MMDQ15546 238 aa16.59■□□□□ 0.25
CHD3-204ENST00000439235 NMSQ5H8A3 153 aa16.59■□□□□ 0.25
CHD3-204ENST00000439235 THOC7Q6I9Y2 204 aaKnown RBP16.59■□□□□ 0.25
CHD3-204ENST00000439235 GSG1LQ6UXU4 331 aa16.59■□□□□ 0.25
CHD3-204ENST00000439235 SSX9Q7RTT3 188 aa16.59■□□□□ 0.25
CHD3-204ENST00000439235 Q8N6K4 173 aa16.59■□□□□ 0.25
CHD3-204ENST00000439235 OR8H1Q8NGG4 311 aa16.59■□□□□ 0.25
CHD3-204ENST00000439235 OR5M8Q8NGP6 311 aa16.59■□□□□ 0.25
CHD3-204ENST00000439235 PRDM13Q9H4Q3 707 aa16.59■□□□□ 0.25
CHD3-204ENST00000439235 TMEM140Q9NV12 185 aa16.59■□□□□ 0.25
CHD3-204ENST00000439235 KIAA1456Q9P272 454 aa16.59■□□□□ 0.25
CHD3-204ENST00000439235 ZFHX3Q15911 3703 aa16.58■□□□□ 0.24
CHD3-204ENST00000439235 C5orf51A6NDU8 294 aa16.58■□□□□ 0.24
CHD3-204ENST00000439235 BTBD17A6NE02 478 aa16.58■□□□□ 0.24
CHD3-204ENST00000439235 H3BUX3 64 aa16.58■□□□□ 0.24
CHD3-204ENST00000439235 CCSO14618 274 aa16.58■□□□□ 0.24
CHD3-204ENST00000439235 SAA1P0DJI8 122 aaPredicted RBP16.58■□□□□ 0.24
CHD3-204ENST00000439235 UBE2KP61086 200 aa16.58■□□□□ 0.24
CHD3-204ENST00000439235 OR4A47Q6IF82 309 aa16.58■□□□□ 0.24
CHD3-204ENST00000439235 VKORC1L1Q8N0U8 176 aa16.58■□□□□ 0.24
CHD3-204ENST00000439235 OR5R1Q8NH85 324 aa16.58■□□□□ 0.24
CHD3-204ENST00000439235 RBMXL1Q96E39 390 aaKnown RBP16.58■□□□□ 0.24
CHD3-204ENST00000439235 C1RLQ9NZP8 487 aa16.58■□□□□ 0.24
CHD3-204ENST00000439235 PITPNC1Q9UKF7 332 aa16.58■□□□□ 0.24
CHD3-204ENST00000439235 SRRM4A7MD48 611 aaKnown RBP16.57■□□□□ 0.24
CHD3-204ENST00000439235 FAM25EA8MYX2 175 aa16.57■□□□□ 0.24
CHD3-204ENST00000439235 NBR2O15453 112 aa16.57■□□□□ 0.24
CHD3-204ENST00000439235 OR2A4O95047 310 aa16.57■□□□□ 0.24
CHD3-204ENST00000439235 IGLV2-23P01705 113 aa16.57■□□□□ 0.24
CHD3-204ENST00000439235 P0C879 139 aa16.57■□□□□ 0.24
CHD3-204ENST00000439235 SRD5A1P18405 259 aa16.57■□□□□ 0.24
CHD3-204ENST00000439235 HNF4GQ14541 408 aa16.57■□□□□ 0.24
CHD3-204ENST00000439235 PSG5Q15238 335 aa16.57■□□□□ 0.24
CHD3-204ENST00000439235 C2orf68Q2NKX9 166 aa16.57■□□□□ 0.24
CHD3-204ENST00000439235 Q6YL49 198 aa16.57■□□□□ 0.24
CHD3-204ENST00000439235 OR4A5Q8NH83 315 aa16.57■□□□□ 0.24
CHD3-204ENST00000439235 CHAC2Q8WUX2 184 aa16.57■□□□□ 0.24
CHD3-204ENST00000439235 GPR146Q96CH1 333 aa16.57■□□□□ 0.24
CHD3-204ENST00000439235 OR2A7Q96R45 310 aa16.57■□□□□ 0.24
CHD3-204ENST00000439235 GSX1Q9H4S2 264 aaPredicted RBP16.57■□□□□ 0.24
CHD3-204ENST00000439235 BET1LQ9NYM9 111 aa16.57■□□□□ 0.24
CHD3-204ENST00000439235 TCF19Q9Y242 345 aa16.57■□□□□ 0.24
CHD3-204ENST00000439235 MAP1AP78559 2803 aaPredicted RBP16.56■□□□□ 0.24
CHD3-204ENST00000439235 A0A1B0GU03 582 aa16.56■□□□□ 0.24
CHD3-204ENST00000439235 C13orf42A0A1B0GVH6 325 aa16.56■□□□□ 0.24
CHD3-204ENST00000439235 SLC25A17O43808 307 aa16.56■□□□□ 0.24
CHD3-204ENST00000439235 SLC25A6P12236 298 aa16.56■□□□□ 0.24
CHD3-204ENST00000439235 PUSL1Q8N0Z8 303 aaKnown RBP16.56■□□□□ 0.24
CHD3-204ENST00000439235 TEX45Q8NA69 505 aa16.56■□□□□ 0.24
CHD3-204ENST00000439235 NPBQ8NG41 125 aa16.56■□□□□ 0.24
CHD3-204ENST00000439235 OR11H7Q8NGC8 314 aa16.56■□□□□ 0.24
CHD3-204ENST00000439235 PIFOQ8TCI5 191 aa16.56■□□□□ 0.24
CHD3-204ENST00000439235 SSMEM1Q8WWF3 244 aa16.56■□□□□ 0.24
CHD3-204ENST00000439235 RITA1Q96K30 269 aa16.56■□□□□ 0.24
CHD3-204ENST00000439235 ZNF48Q96MX3 618 aaPredicted RBP16.56■□□□□ 0.24
CHD3-204ENST00000439235 PDCD10Q9BUL8 212 aa16.56■□□□□ 0.24
CHD3-204ENST00000439235 A0A0G2JRQ6 117 aa16.55■□□□□ 0.24
CHD3-204ENST00000439235 RRHO14718 337 aa16.55■□□□□ 0.24
CHD3-204ENST00000439235 SNAPC5O75971 98 aa16.55■□□□□ 0.24
CHD3-204ENST00000439235 KBTBD11O94819 623 aa16.55■□□□□ 0.24
CHD3-204ENST00000439235 NDUFA3O95167 84 aa16.55■□□□□ 0.24
CHD3-204ENST00000439235 CNTFRP26992 372 aa16.55■□□□□ 0.24
CHD3-204ENST00000439235 IER3P46695 156 aa16.55■□□□□ 0.24
CHD3-204ENST00000439235 SMCO1Q147U7 214 aa16.55■□□□□ 0.24
CHD3-204ENST00000439235 PLGLAQ15195 96 aa16.55■□□□□ 0.24
CHD3-204ENST00000439235 IAH1Q2TAA2 248 aaPredicted RBP16.55■□□□□ 0.24
CHD3-204ENST00000439235 TUSC1Q2TAM9 212 aa16.55■□□□□ 0.24
CHD3-204ENST00000439235 RBMS3Q6XE24 437 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms