RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 ACSF3Q4G176 576 aaPredicted RBP13.56□□□□□ -0.24
PTPN13-204ENST00000436978 ZNF841Q6ZN19 808 aa13.56□□□□□ -0.24
PTPN13-204ENST00000436978 FAM181BA6NEQ2 426 aa13.56□□□□□ -0.24
PTPN13-204ENST00000436978 ARF6P62330 175 aa13.56□□□□□ -0.24
PTPN13-204ENST00000436978 MEF2BQ02080 365 aaPredicted RBP13.56□□□□□ -0.24
PTPN13-204ENST00000436978 RSG1Q9BU20 258 aa13.56□□□□□ -0.24
PTPN13-204ENST00000436978 TAF15Q92804 592 aaKnown RBP eCLIP13.56□□□□□ -0.24
PTPN13-204ENST00000436978 SMIM8Q96KF7 97 aa13.56□□□□□ -0.24
PTPN13-204ENST00000436978 PPP1R3EQ9H7J1 279 aa13.56□□□□□ -0.24
PTPN13-204ENST00000436978 ZNF880Q6PDB4 577 aa13.55□□□□□ -0.24
PTPN13-204ENST00000436978 ACP7Q6ZNF0 438 aa13.55□□□□□ -0.24
PTPN13-204ENST00000436978 IL17BQ9UHF5 180 aa13.55□□□□□ -0.24
PTPN13-204ENST00000436978 TMSB15BA0A087X1C1 80 aa13.55□□□□□ -0.24
PTPN13-204ENST00000436978 HSPB1P04792 205 aaKnown RBP13.55□□□□□ -0.24
PTPN13-204ENST00000436978 CKS2P33552 79 aa13.55□□□□□ -0.24
PTPN13-204ENST00000436978 RECKO95980 971 aa13.55□□□□□ -0.24
PTPN13-204ENST00000436978 UNQ9370/PRO34162Q6UXP9 181 aa13.55□□□□□ -0.24
PTPN13-204ENST00000436978 HLA-DQB1P01920 261 aa13.55□□□□□ -0.24
PTPN13-204ENST00000436978 WDR25Q64LD2 544 aaPredicted RBP13.55□□□□□ -0.24
PTPN13-204ENST00000436978 TRIOBPQ9H2D6 2365 aa13.55□□□□□ -0.24
PTPN13-204ENST00000436978 AMY1AP04745 511 aa13.55□□□□□ -0.24
PTPN13-204ENST00000436978 TFPI2P48307 235 aa13.55□□□□□ -0.24
PTPN13-204ENST00000436978 SAMD13Q5VXD3 122 aa13.55□□□□□ -0.24
PTPN13-204ENST00000436978 TRAV34A0A0B4J273 112 aa13.55□□□□□ -0.24
PTPN13-204ENST00000436978 ARL14EPLP0DKL9 152 aa13.55□□□□□ -0.24
PTPN13-204ENST00000436978 HERPUD1Q15011 391 aa13.55□□□□□ -0.24
PTPN13-204ENST00000436978 CD200R1LQ6Q8B3 271 aa13.55□□□□□ -0.24
PTPN13-204ENST00000436978 CYB561D1Q8N8Q1 229 aa13.55□□□□□ -0.24
PTPN13-204ENST00000436978 OR51G1Q8NGK1 321 aa13.55□□□□□ -0.24
PTPN13-204ENST00000436978 CBY3A6NI87 242 aa13.54□□□□□ -0.24
PTPN13-204ENST00000436978 BSPH1Q075Z2 132 aa13.54□□□□□ -0.24
PTPN13-204ENST00000436978 SLC16A13Q7RTY0 426 aa13.54□□□□□ -0.24
PTPN13-204ENST00000436978 OVCH2Q7RTZ1 564 aa13.54□□□□□ -0.24
PTPN13-204ENST00000436978 SGMS2Q8NHU3 365 aa13.54□□□□□ -0.24
PTPN13-204ENST00000436978 FAM168AQ92567 244 aa13.54□□□□□ -0.24
PTPN13-204ENST00000436978 MEGF10Q96KG7 1140 aa13.54□□□□□ -0.24
PTPN13-204ENST00000436978 AQP10Q96PS8 301 aa13.54□□□□□ -0.24
PTPN13-204ENST00000436978 SMIM6P0DI80 62 aa13.54□□□□□ -0.24
PTPN13-204ENST00000436978 OR5AC2Q9NZP5 309 aa13.54□□□□□ -0.24
PTPN13-204ENST00000436978 OR4C46A6NHA9 309 aa13.54□□□□□ -0.24
PTPN13-204ENST00000436978 BTF3P20290 206 aaKnown RBP13.54□□□□□ -0.24
PTPN13-204ENST00000436978 MFAP2P55001 183 aa13.54□□□□□ -0.24
PTPN13-204ENST00000436978 AMELYQ99218 206 aa13.54□□□□□ -0.24
PTPN13-204ENST00000436978 THY1P04216 161 aa13.54□□□□□ -0.24
PTPN13-204ENST00000436978 UBE2V2Q15819 145 aa13.54□□□□□ -0.24
PTPN13-204ENST00000436978 SIGIRRQ6IA17 410 aa13.54□□□□□ -0.24
PTPN13-204ENST00000436978 KCNE5Q9UJ90 142 aa13.54□□□□□ -0.24
PTPN13-204ENST00000436978 HAX1O00165 279 aa13.54□□□□□ -0.24
PTPN13-204ENST00000436978 NPPCP23582 126 aa13.54□□□□□ -0.24
PTPN13-204ENST00000436978 PNKDQ8N490 385 aa13.54□□□□□ -0.24
PTPN13-204ENST00000436978 OR4C12Q96R67 309 aa13.54□□□□□ -0.24
PTPN13-204ENST00000436978 MOB4Q9Y3A3 225 aa13.54□□□□□ -0.24
PTPN13-204ENST00000436978 DLX6P56179 175 aa13.54□□□□□ -0.24
PTPN13-204ENST00000436978 LY6EQ16553 131 aa13.54□□□□□ -0.24
PTPN13-204ENST00000436978 OR51M1Q9H341 326 aa13.54□□□□□ -0.24
PTPN13-204ENST00000436978 ZNF318Q5VUA4 2279 aa13.53□□□□□ -0.24
PTPN13-204ENST00000436978 HLA-DQA1P01909 254 aa13.53□□□□□ -0.24
PTPN13-204ENST00000436978 SUCLG1P53597 346 aaKnown RBP13.53□□□□□ -0.24
PTPN13-204ENST00000436978 MAP1LC3AQ9H492 121 aa13.53□□□□□ -0.24
PTPN13-204ENST00000436978 PRDM6Q9NQX0 595 aa13.53□□□□□ -0.24
PTPN13-204ENST00000436978 TMEM106BQ9NUM4 274 aa13.53□□□□□ -0.24
PTPN13-204ENST00000436978 ZNF708P17019 499 aa13.53□□□□□ -0.24
PTPN13-204ENST00000436978 CX3CL1P78423 397 aa13.53□□□□□ -0.24
PTPN13-204ENST00000436978 FXYD3Q14802 87 aa13.53□□□□□ -0.24
PTPN13-204ENST00000436978 NUDT3O95989 172 aa13.53□□□□□ -0.24
PTPN13-204ENST00000436978 GCGP01275 180 aa13.53□□□□□ -0.24
PTPN13-204ENST00000436978 NUTF2P61970 127 aaKnown RBP13.53□□□□□ -0.24
PTPN13-204ENST00000436978 SIGLEC12Q96PQ1 595 aa13.53□□□□□ -0.24
PTPN13-204ENST00000436978 C1QCP02747 245 aa13.53□□□□□ -0.24
PTPN13-204ENST00000436978 HKR1P10072 659 aa13.53□□□□□ -0.24
PTPN13-204ENST00000436978 TMEM252Q8N6L7 170 aa13.53□□□□□ -0.24
PTPN13-204ENST00000436978 ISOC2Q96AB3 205 aa13.53□□□□□ -0.24
PTPN13-204ENST00000436978 TLNRD1Q9H1K6 362 aa13.53□□□□□ -0.24
PTPN13-204ENST00000436978 A0A0G2JLM5 398 aa13.53□□□□□ -0.24
PTPN13-204ENST00000436978 CTSBP07858 339 aa13.53□□□□□ -0.24
PTPN13-204ENST00000436978 ANOS1P23352 680 aa13.53□□□□□ -0.24
PTPN13-204ENST00000436978 RND2P52198 227 aa13.53□□□□□ -0.24
PTPN13-204ENST00000436978 C8orf88P0DMB2 117 aa13.52□□□□□ -0.24
PTPN13-204ENST00000436978 NDUFB4O95168 129 aa13.52□□□□□ -0.24
PTPN13-204ENST00000436978 RGP1Q92546 391 aaPredicted RBP13.52□□□□□ -0.24
PTPN13-204ENST00000436978 LMX1BO60663 402 aa13.52□□□□□ -0.25
PTPN13-204ENST00000436978 GPX1P07203 203 aa13.52□□□□□ -0.25
PTPN13-204ENST00000436978 TRGC1P0CF51 173 aa13.52□□□□□ -0.25
PTPN13-204ENST00000436978 C5orf66Q9H5L9 145 aa13.52□□□□□ -0.25
PTPN13-204ENST00000436978 NUP210Q8TEM1 1887 aaPredicted RBP13.52□□□□□ -0.25
PTPN13-204ENST00000436978 DOCK8Q8NF50 2099 aa13.52□□□□□ -0.25
PTPN13-204ENST00000436978 PHF3Q92576 2039 aaKnown RBP13.52□□□□□ -0.25
PTPN13-204ENST00000436978 P2RY4P51582 365 aa13.52□□□□□ -0.25
PTPN13-204ENST00000436978 APCDD1LQ8NCL9 501 aa13.52□□□□□ -0.25
PTPN13-204ENST00000436978 LINC01560Q8TB33 94 aa13.52□□□□□ -0.25
PTPN13-204ENST00000436978 KBTBD11O94819 623 aa13.52□□□□□ -0.25
PTPN13-204ENST00000436978 RPL29P47914 159 aaKnown RBP13.52□□□□□ -0.25
PTPN13-204ENST00000436978 GCM2O75603 506 aaPredicted RBP13.51□□□□□ -0.25
PTPN13-204ENST00000436978 ASPHD2Q6ICH7 369 aa13.51□□□□□ -0.25
PTPN13-204ENST00000436978 TBX15Q96SF7 602 aa13.51□□□□□ -0.25
PTPN13-204ENST00000436978 TRBV9A0A0B4J1U6 114 aa13.51□□□□□ -0.25
PTPN13-204ENST00000436978 A0A1W2PP11 408 aa13.51□□□□□ -0.25
PTPN13-204ENST00000436978 TRAV20A0A0B4J274 112 aa13.51□□□□□ -0.25
PTPN13-204ENST00000436978 SPSB4Q96A44 273 aa13.51□□□□□ -0.25
PTPN13-204ENST00000436978 ZNF818PQ6ZRF7 136 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms