RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 CEACAM8P31997 349 aaPredicted RBP15.38■□□□□ 0.05
CLK1-205ENST00000434813 RAB7AP51149 207 aa15.38■□□□□ 0.05
CLK1-205ENST00000434813 ZNF134P52741 427 aa15.38■□□□□ 0.05
CLK1-205ENST00000434813 SPCS3P61009 180 aa15.38■□□□□ 0.05
CLK1-205ENST00000434813 ERVK-16P61578 105 aa15.38■□□□□ 0.05
CLK1-205ENST00000434813 RPS16P62249 146 aaKnown RBP15.38■□□□□ 0.05
CLK1-205ENST00000434813 WDR25Q64LD2 544 aaPredicted RBP15.38■□□□□ 0.05
CLK1-205ENST00000434813 MANBALQ9NQG1 85 aa15.38■□□□□ 0.05
CLK1-205ENST00000434813 GAB2Q9UQC2 676 aa15.38■□□□□ 0.05
CLK1-205ENST00000434813 URGCP-MRPS24S4R325 110 aa15.38■□□□□ 0.05
CLK1-205ENST00000434813 NQO2P16083 231 aa15.37■□□□□ 0.05
CLK1-205ENST00000434813 TBR1Q16650 682 aa15.37■□□□□ 0.05
CLK1-205ENST00000434813 DDB2Q92466 427 aa15.37■□□□□ 0.05
CLK1-205ENST00000434813 ANKRD11Q6UB99 2663 aaPredicted RBP15.37■□□□□ 0.05
CLK1-205ENST00000434813 TMEM250H0YL14 139 aa15.36■□□□□ 0.05
CLK1-205ENST00000434813 PSMB3P49720 205 aa15.36■□□□□ 0.05
CLK1-205ENST00000434813 Q8N7P7 452 aa15.36■□□□□ 0.05
CLK1-205ENST00000434813 OR4A16Q8NH70 328 aa15.36■□□□□ 0.05
CLK1-205ENST00000434813 SDSLQ96GA7 329 aa15.36■□□□□ 0.05
CLK1-205ENST00000434813 DIRC2Q96SL1 478 aa15.36■□□□□ 0.05
CLK1-205ENST00000434813 S1PR3Q99500 378 aa15.36■□□□□ 0.05
CLK1-205ENST00000434813 RNF7Q9UBF6 113 aa15.36■□□□□ 0.05
CLK1-205ENST00000434813 WDR83OSQ9Y284 106 aa15.36■□□□□ 0.05
CLK1-205ENST00000434813 TGIF2-C20orf24A0A0A6YYL0 155 aa15.36■□□□□ 0.05
CLK1-205ENST00000434813 CLDN34H7C241 214 aa15.36■□□□□ 0.05
CLK1-205ENST00000434813 SLC31A2O15432 143 aa15.36■□□□□ 0.05
CLK1-205ENST00000434813 RPP30P78346 268 aaKnown RBP15.36■□□□□ 0.05
CLK1-205ENST00000434813 KIAA0141Q14154 515 aaPredicted RBP15.36■□□□□ 0.05
CLK1-205ENST00000434813 C17orf58Q2M2W7 97 aa15.36■□□□□ 0.05
CLK1-205ENST00000434813 STUMQ69YW2 141 aa15.36■□□□□ 0.05
CLK1-205ENST00000434813 CYP2G1PQ6ZSU1 146 aa15.36■□□□□ 0.05
CLK1-205ENST00000434813 SSX9Q7RTT3 188 aa15.36■□□□□ 0.05
CLK1-205ENST00000434813 FAM57AQ8TBR7 257 aa15.36■□□□□ 0.05
CLK1-205ENST00000434813 ZNF251Q9BRH9 671 aa15.36■□□□□ 0.05
CLK1-205ENST00000434813 FAM234AQ9H0X4 552 aa15.36■□□□□ 0.05
CLK1-205ENST00000434813 GFOD1Q9NXC2 390 aa15.36■□□□□ 0.05
CLK1-205ENST00000434813 NAT8Q9UHE5 227 aa15.36■□□□□ 0.05
CLK1-205ENST00000434813 SVILO95425 2214 aa15.36■□□□□ 0.05
CLK1-205ENST00000434813 DSPP15924 2871 aaKnown RBP15.35■□□□□ 0.05
CLK1-205ENST00000434813 ACACAQ13085 2346 aa15.35■□□□□ 0.05
CLK1-205ENST00000434813 SOX15O60248 233 aa15.35■□□□□ 0.05
CLK1-205ENST00000434813 KBTBD11O94819 623 aa15.35■□□□□ 0.05
CLK1-205ENST00000434813 SELLP14151 372 aa15.35■□□□□ 0.05
CLK1-205ENST00000434813 VDAC2P45880 294 aaPredicted RBP15.35■□□□□ 0.05
CLK1-205ENST00000434813 SELENOVP59797 346 aa15.35■□□□□ 0.05
CLK1-205ENST00000434813 S100A12P80511 92 aa15.35■□□□□ 0.05
CLK1-205ENST00000434813 RELBQ01201 579 aa15.35■□□□□ 0.05
CLK1-205ENST00000434813 ZNF674Q2M3X9 581 aa15.35■□□□□ 0.05
CLK1-205ENST00000434813 C1orf87Q8N0U7 546 aa15.35■□□□□ 0.05
CLK1-205ENST00000434813 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.35■□□□□ 0.05
CLK1-205ENST00000434813 RAB24Q969Q5 203 aa15.35■□□□□ 0.05
CLK1-205ENST00000434813 CTDSP1Q9GZU7 261 aa15.35■□□□□ 0.05
CLK1-205ENST00000434813 TMPRSS5Q9H3S3 457 aa15.35■□□□□ 0.05
CLK1-205ENST00000434813 GCM1Q9NP62 436 aa15.35■□□□□ 0.05
CLK1-205ENST00000434813 IL19Q9UHD0 177 aa15.35■□□□□ 0.05
CLK1-205ENST00000434813 ATMQ13315 3056 aa15.35■□□□□ 0.05
CLK1-205ENST00000434813 KBTBD11-OT1A0A1B0GTJ5 212 aa15.34■□□□□ 0.05
CLK1-205ENST00000434813 HMGB3O15347 200 aaKnown RBP15.34■□□□□ 0.05
CLK1-205ENST00000434813 IGHV1-46P01743 117 aa15.34■□□□□ 0.05
CLK1-205ENST00000434813 CD1BP29016 333 aa15.34■□□□□ 0.05
CLK1-205ENST00000434813 TMPRSS3P57727 454 aa15.34■□□□□ 0.05
CLK1-205ENST00000434813 ACOT6Q3I5F7 207 aaPredicted RBP15.34■□□□□ 0.05
CLK1-205ENST00000434813 FAM201AQ5SY85 155 aa15.34■□□□□ 0.05
CLK1-205ENST00000434813 OR13D1Q8NGV5 346 aa15.34■□□□□ 0.05
CLK1-205ENST00000434813 OR4S2Q8NH73 311 aa15.34■□□□□ 0.05
CLK1-205ENST00000434813 SMIM7Q9BQ49 75 aa15.34■□□□□ 0.05
CLK1-205ENST00000434813 TMEM140Q9NV12 185 aa15.34■□□□□ 0.05
CLK1-205ENST00000434813 A8MXE2 369 aa15.34■□□□□ 0.05
CLK1-205ENST00000434813 CYB5BO43169 146 aa15.34■□□□□ 0.05
CLK1-205ENST00000434813 IGHV3-7P01780 117 aa15.34■□□□□ 0.05
CLK1-205ENST00000434813 S100A9P06702 114 aaKnown RBP15.34■□□□□ 0.05
CLK1-205ENST00000434813 TNFAIP6P98066 277 aaPredicted RBP15.34■□□□□ 0.05
CLK1-205ENST00000434813 TLE1Q04724 770 aa15.34■□□□□ 0.05
CLK1-205ENST00000434813 GGACTQ9BVM4 153 aa15.34■□□□□ 0.05
CLK1-205ENST00000434813 DOCK11Q5JSL3 2073 aa15.34■□□□□ 0.05
CLK1-205ENST00000434813 SEC14L6B5MCN3 397 aa15.33■□□□□ 0.04
CLK1-205ENST00000434813 MPDU1O75352 247 aa15.33■□□□□ 0.04
CLK1-205ENST00000434813 CD40P25942 277 aa15.33■□□□□ 0.04
CLK1-205ENST00000434813 VKORC1L1Q8N0U8 176 aa15.33■□□□□ 0.04
CLK1-205ENST00000434813 HCFC1P51610 2035 aa15.33■□□□□ 0.04
CLK1-205ENST00000434813 SAA2-SAA4A0A096LPE2 208 aa15.33■□□□□ 0.04
CLK1-205ENST00000434813 TRGV10A0A0A0MS01 117 aa15.33■□□□□ 0.04
CLK1-205ENST00000434813 TRGV8A0A0C4DH27 118 aa15.33■□□□□ 0.04
CLK1-205ENST00000434813 PRSS46E5RG02 174 aa15.33■□□□□ 0.04
CLK1-205ENST00000434813 IFNA10P01566 189 aa15.33■□□□□ 0.04
CLK1-205ENST00000434813 SAA2P0DJI9 122 aaPredicted RBP15.33■□□□□ 0.04
CLK1-205ENST00000434813 CDC34P49427 236 aaPredicted RBP15.33■□□□□ 0.04
CLK1-205ENST00000434813 UCNP55089 124 aa15.33■□□□□ 0.04
CLK1-205ENST00000434813 FAM27E3Q08E93 113 aa15.33■□□□□ 0.04
CLK1-205ENST00000434813 CT45A1Q5HYN5 189 aa15.33■□□□□ 0.04
CLK1-205ENST00000434813 UTF1Q5T230 341 aa15.33■□□□□ 0.04
CLK1-205ENST00000434813 C1orf229Q6ZS94 237 aaPredicted RBP15.33■□□□□ 0.04
CLK1-205ENST00000434813 CT45A3Q8NHU0 189 aa15.33■□□□□ 0.04
CLK1-205ENST00000434813 GAFA1Q96PS6 74 aa15.33■□□□□ 0.04
CLK1-205ENST00000434813 DSCAML1Q8TD84 2053 aa15.32■□□□□ 0.04
CLK1-205ENST00000434813 OPN1MWP04001 364 aa15.32■□□□□ 0.04
CLK1-205ENST00000434813 OPN1MW2P0DN77 364 aa15.32■□□□□ 0.04
CLK1-205ENST00000434813 OPN1MW3P0DN78 364 aa15.32■□□□□ 0.04
CLK1-205ENST00000434813 TNFSF4P23510 183 aa15.32■□□□□ 0.04
CLK1-205ENST00000434813 CCKARP32238 428 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms