RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 TMEM56-RWDD3S4R434 201 aa13□□□□□ -0.33
SCARF1-203ENST00000434376 PPP5D1E7EU14 171 aa13□□□□□ -0.33
SCARF1-203ENST00000434376 TMPRSS2O15393 492 aa13□□□□□ -0.33
SCARF1-203ENST00000434376 OR10A7Q8NGE5 316 aa13□□□□□ -0.33
SCARF1-203ENST00000434376 PCGF1Q9BSM1 259 aa13□□□□□ -0.33
SCARF1-203ENST00000434376 ELOVL1Q9BW60 279 aa13□□□□□ -0.33
SCARF1-203ENST00000434376 RIMS4Q9H426 269 aaPredicted RBP13□□□□□ -0.33
SCARF1-203ENST00000434376 EREGO14944 169 aa13□□□□□ -0.33
SCARF1-203ENST00000434376 CLDN14O95500 239 aa13□□□□□ -0.33
SCARF1-203ENST00000434376 IGLV2-14P01704 120 aa13□□□□□ -0.33
SCARF1-203ENST00000434376 ZNF506Q5JVG8 444 aa13□□□□□ -0.33
SCARF1-203ENST00000434376 SAXO1Q8IYX7 474 aa13□□□□□ -0.33
SCARF1-203ENST00000434376 FAM185AQ8N0U4 392 aa13□□□□□ -0.33
SCARF1-203ENST00000434376 SIRT7Q9NRC8 400 aa13□□□□□ -0.33
SCARF1-203ENST00000434376 PLSCR2Q9NRY7 297 aa13□□□□□ -0.33
SCARF1-203ENST00000434376 AMBPP02760 352 aa12.99□□□□□ -0.33
SCARF1-203ENST00000434376 PRB4P10163 310 aaPredicted RBP12.99□□□□□ -0.33
SCARF1-203ENST00000434376 GCSAMLQ5JQS6 135 aa12.99□□□□□ -0.33
SCARF1-203ENST00000434376 C16orf82Q7Z2V1 217 aa12.99□□□□□ -0.33
SCARF1-203ENST00000434376 SLC35E3Q7Z769 313 aa12.99□□□□□ -0.33
SCARF1-203ENST00000434376 ODF3L1Q8IXM7 274 aa12.99□□□□□ -0.33
SCARF1-203ENST00000434376 LYG1Q8N1E2 194 aa12.99□□□□□ -0.33
SCARF1-203ENST00000434376 LHX4Q969G2 390 aa12.99□□□□□ -0.33
SCARF1-203ENST00000434376 C5orf30Q96GV9 206 aa12.99□□□□□ -0.33
SCARF1-203ENST00000434376 FAM215AQ9Y5M1 114 aa12.99□□□□□ -0.33
SCARF1-203ENST00000434376 USP9YO00507 2555 aaPredicted RBP12.99□□□□□ -0.33
SCARF1-203ENST00000434376 IQCF6A8MYZ5 107 aa12.99□□□□□ -0.33
SCARF1-203ENST00000434376 H7BYZ3 331 aa12.99□□□□□ -0.33
SCARF1-203ENST00000434376 ID3Q02535 119 aa12.99□□□□□ -0.33
SCARF1-203ENST00000434376 PRAMEF5Q5TYX0 476 aa12.99□□□□□ -0.33
SCARF1-203ENST00000434376 GATAD1Q8WUU5 269 aa12.99□□□□□ -0.33
SCARF1-203ENST00000434376 RBKSQ9H477 322 aa12.99□□□□□ -0.33
SCARF1-203ENST00000434376 LIN7CQ9NUP9 197 aaKnown RBP12.99□□□□□ -0.33
SCARF1-203ENST00000434376 PITPNC1Q9UKF7 332 aa12.99□□□□□ -0.33
SCARF1-203ENST00000434376 WIPI2Q9Y4P8 454 aa12.99□□□□□ -0.33
SCARF1-203ENST00000434376 TRAV3A0A0B4J244 114 aa12.98□□□□□ -0.33
SCARF1-203ENST00000434376 ODAMA1E959 279 aa12.98□□□□□ -0.33
SCARF1-203ENST00000434376 SPINT2O43291 252 aa12.98□□□□□ -0.33
SCARF1-203ENST00000434376 CD33P20138 364 aa12.98□□□□□ -0.33
SCARF1-203ENST00000434376 RPL29P47914 159 aaKnown RBP12.98□□□□□ -0.33
SCARF1-203ENST00000434376 KLF3P57682 345 aaPredicted RBP12.98□□□□□ -0.33
SCARF1-203ENST00000434376 PRSS8Q16651 343 aa12.98□□□□□ -0.33
SCARF1-203ENST00000434376 ZNF705AQ6ZN79 300 aaPredicted RBP12.98□□□□□ -0.33
SCARF1-203ENST00000434376 OR5D13Q8NGL4 314 aa12.98□□□□□ -0.33
SCARF1-203ENST00000434376 FAM122AQ96E09 287 aa12.98□□□□□ -0.33
SCARF1-203ENST00000434376 ATP5SQ99766 215 aa12.98□□□□□ -0.33
SCARF1-203ENST00000434376 GZMBP10144 247 aa12.98□□□□□ -0.33
SCARF1-203ENST00000434376 BCL2P10415 239 aa12.98□□□□□ -0.33
SCARF1-203ENST00000434376 CHRNA7P36544 502 aa12.98□□□□□ -0.33
SCARF1-203ENST00000434376 SLC38A11Q08AI6 406 aa12.98□□□□□ -0.33
SCARF1-203ENST00000434376 PRSS33Q8NF86 280 aa12.98□□□□□ -0.33
SCARF1-203ENST00000434376 NEUROG1Q92886 237 aa12.98□□□□□ -0.33
SCARF1-203ENST00000434376 MRPL37Q9BZE1 423 aaKnown RBP12.98□□□□□ -0.33
SCARF1-203ENST00000434376 HEYLQ9NQ87 328 aaPredicted RBP12.98□□□□□ -0.33
SCARF1-203ENST00000434376 SLC39A9Q9NUM3 307 aa12.98□□□□□ -0.33
SCARF1-203ENST00000434376 CREBBPQ92793 2442 aa12.98□□□□□ -0.33
SCARF1-203ENST00000434376 LOC102723971A0A1B0GUV8 181 aa12.98□□□□□ -0.33
SCARF1-203ENST00000434376 IGKV3-15P01624 115 aa12.98□□□□□ -0.33
SCARF1-203ENST00000434376 GFRALQ6UXV0 394 aa12.98□□□□□ -0.33
SCARF1-203ENST00000434376 HCFC1P51610 2035 aa12.97□□□□□ -0.33
SCARF1-203ENST00000434376 A0A087WWC5 75 aa12.97□□□□□ -0.33
SCARF1-203ENST00000434376 LYNX1G3V0Z9 82 aa12.97□□□□□ -0.33
SCARF1-203ENST00000434376 LYNX1P0DP58 116 aa12.97□□□□□ -0.33
SCARF1-203ENST00000434376 TAS2R30P59541 319 aa12.97□□□□□ -0.33
SCARF1-203ENST00000434376 SSX7Q7RTT5 188 aa12.97□□□□□ -0.33
SCARF1-203ENST00000434376 LRTM2Q8N967 370 aa12.97□□□□□ -0.33
SCARF1-203ENST00000434376 PATZ1Q9HBE1 687 aaKnown RBP12.97□□□□□ -0.33
SCARF1-203ENST00000434376 A0A1B0GUS0 222 aa12.97□□□□□ -0.33
SCARF1-203ENST00000434376 MAP1LC3B2A6NCE7 125 aa12.97□□□□□ -0.33
SCARF1-203ENST00000434376 FAM90A10PA6NDY2 464 aa12.97□□□□□ -0.33
SCARF1-203ENST00000434376 FAM90A18PA6NE21 464 aa12.97□□□□□ -0.33
SCARF1-203ENST00000434376 FAM90A16PA6NEW6 464 aa12.97□□□□□ -0.33
SCARF1-203ENST00000434376 FAM90A20PA6NIJ5 464 aa12.97□□□□□ -0.33
SCARF1-203ENST00000434376 FAM90A8PA6NJQ4 464 aa12.97□□□□□ -0.33
SCARF1-203ENST00000434376 FAM90A7PA6NKC0 464 aa12.97□□□□□ -0.33
SCARF1-203ENST00000434376 FAM90A22PA8MWA6 464 aa12.97□□□□□ -0.33
SCARF1-203ENST00000434376 FAM90A12PA8MX19 464 aa12.97□□□□□ -0.33
SCARF1-203ENST00000434376 FAM90A5PA8MXJ8 464 aa12.97□□□□□ -0.33
SCARF1-203ENST00000434376 FAM90A23PA8MXZ1 464 aa12.97□□□□□ -0.33
SCARF1-203ENST00000434376 AQP7O14520 342 aa12.97□□□□□ -0.33
SCARF1-203ENST00000434376 IGHG3P01860 377 aa12.97□□□□□ -0.33
SCARF1-203ENST00000434376 FAM90A15PP0C7V4 464 aa12.97□□□□□ -0.33
SCARF1-203ENST00000434376 FAM90A13PP0C7W8 464 aa12.97□□□□□ -0.33
SCARF1-203ENST00000434376 FAM90A14PP0C7W9 464 aa12.97□□□□□ -0.33
SCARF1-203ENST00000434376 FAM90A24PP0C7X0 464 aa12.97□□□□□ -0.33
SCARF1-203ENST00000434376 TFF3Q07654 80 aa12.97□□□□□ -0.33
SCARF1-203ENST00000434376 ABHD12Q8N2K0 398 aa12.97□□□□□ -0.33
SCARF1-203ENST00000434376 GCSAMQ8N6F7 178 aa12.97□□□□□ -0.33
SCARF1-203ENST00000434376 OR1P1Q8NH06 330 aa12.97□□□□□ -0.33
SCARF1-203ENST00000434376 OR4F5Q8NH21 305 aa12.97□□□□□ -0.33
SCARF1-203ENST00000434376 OR4F4Q96R69 305 aa12.97□□□□□ -0.33
SCARF1-203ENST00000434376 MAP1LC3BQ9GZQ8 125 aa12.97□□□□□ -0.33
SCARF1-203ENST00000434376 TLN2Q9Y4G6 2542 aa12.97□□□□□ -0.33
SCARF1-203ENST00000434376 IGKV1D-17A0A075B6S4 117 aa12.96□□□□□ -0.33
SCARF1-203ENST00000434376 DFFBO76075 338 aa12.96□□□□□ -0.33
SCARF1-203ENST00000434376 OR4A8P0C604 315 aa12.96□□□□□ -0.33
SCARF1-203ENST00000434376 ZNF25P17030 456 aaPredicted RBP12.96□□□□□ -0.33
SCARF1-203ENST00000434376 GALR1P47211 349 aa12.96□□□□□ -0.33
SCARF1-203ENST00000434376 ERVK11-1P61568 191 aa12.96□□□□□ -0.33
SCARF1-203ENST00000434376 TNFAIP6P98066 277 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms