RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 TMPRSS3P57727 454 aa6.17□□□□□ -1.42
COL17A1-204ENST00000433822 S100A12P80511 92 aa6.17□□□□□ -1.42
COL17A1-204ENST00000433822 RUNX1Q01196 453 aa6.17□□□□□ -1.42
COL17A1-204ENST00000433822 SLC38A11Q08AI6 406 aa6.17□□□□□ -1.42
COL17A1-204ENST00000433822 FOXF2Q12947 444 aa6.17□□□□□ -1.42
COL17A1-204ENST00000433822 POU2AF1Q16633 256 aa6.17□□□□□ -1.42
COL17A1-204ENST00000433822 C1orf185Q5T7R7 199 aa6.17□□□□□ -1.42
COL17A1-204ENST00000433822 C5orf24Q7Z6I8 188 aa6.17□□□□□ -1.42
COL17A1-204ENST00000433822 HAPLN4Q86UW8 402 aa6.17□□□□□ -1.42
COL17A1-204ENST00000433822 LILRB2Q8N423 598 aa6.17□□□□□ -1.42
COL17A1-204ENST00000433822 NUP37Q8NFH4 326 aa6.17□□□□□ -1.42
COL17A1-204ENST00000433822 OR10P1Q8NGE3 313 aa6.17□□□□□ -1.42
COL17A1-204ENST00000433822 OR10A7Q8NGE5 316 aa6.17□□□□□ -1.42
COL17A1-204ENST00000433822 OR13D1Q8NGV5 346 aa6.17□□□□□ -1.42
COL17A1-204ENST00000433822 SFT2D1Q8WV19 159 aa6.17□□□□□ -1.42
COL17A1-204ENST00000433822 S100PBPQ96BU1 408 aa6.17□□□□□ -1.42
COL17A1-204ENST00000433822 MUCL1Q96DR8 90 aa6.17□□□□□ -1.42
COL17A1-204ENST00000433822 C5orf30Q96GV9 206 aa6.17□□□□□ -1.42
COL17A1-204ENST00000433822 RCC1LQ96I51 464 aaKnown RBP6.17□□□□□ -1.42
COL17A1-204ENST00000433822 ADTRPQ96IZ2 230 aa6.17□□□□□ -1.42
COL17A1-204ENST00000433822 CLCC1Q96S66 551 aa6.17□□□□□ -1.42
COL17A1-204ENST00000433822 SSX3Q99909 188 aa6.17□□□□□ -1.42
COL17A1-204ENST00000433822 TXNDC17Q9BRA2 123 aa6.17□□□□□ -1.42
COL17A1-204ENST00000433822 CTDSP1Q9GZU7 261 aa6.17□□□□□ -1.42
COL17A1-204ENST00000433822 PARP12Q9H0J9 701 aaKnown RBP6.17□□□□□ -1.42
COL17A1-204ENST00000433822 RBKSQ9H477 322 aa6.17□□□□□ -1.42
COL17A1-204ENST00000433822 MANBALQ9NQG1 85 aa6.17□□□□□ -1.42
COL17A1-204ENST00000433822 VAX2Q9UIW0 290 aa6.17□□□□□ -1.42
COL17A1-204ENST00000433822 GTF3C1Q12789 2109 aa6.17□□□□□ -1.42
COL17A1-204ENST00000433822 USF3Q68DE3 2245 aa6.17□□□□□ -1.42
COL17A1-204ENST00000433822 KIAA2026Q5HYC2 2103 aa6.16□□□□□ -1.42
COL17A1-204ENST00000433822 CTXND1A0A1B0GTU2 59 aa6.16□□□□□ -1.42
COL17A1-204ENST00000433822 C5orf52A6NGY3 159 aa6.16□□□□□ -1.42
COL17A1-204ENST00000433822 C17orf112F2Z3M2 114 aa6.16□□□□□ -1.42
COL17A1-204ENST00000433822 H3BQ15 152 aa6.16□□□□□ -1.42
COL17A1-204ENST00000433822 ZNHIT1O43257 154 aa6.16□□□□□ -1.42
COL17A1-204ENST00000433822 ZG16O60844 167 aa6.16□□□□□ -1.42
COL17A1-204ENST00000433822 ARG1P05089 322 aa6.16□□□□□ -1.42
COL17A1-204ENST00000433822 SNRNP70P08621 437 aaKnown RBP6.16□□□□□ -1.42
COL17A1-204ENST00000433822 METTL15P1P0C7V9 234 aa6.16□□□□□ -1.42
COL17A1-204ENST00000433822 DUTP33316 252 aaKnown RBP6.16□□□□□ -1.42
COL17A1-204ENST00000433822 ASCL1P50553 236 aa6.16□□□□□ -1.42
COL17A1-204ENST00000433822 BRWD1-AS2P59051 145 aa6.16□□□□□ -1.42
COL17A1-204ENST00000433822 SELENOVP59797 346 aa6.16□□□□□ -1.42
COL17A1-204ENST00000433822 RPL30P62888 115 aaKnown RBP6.16□□□□□ -1.42
COL17A1-204ENST00000433822 CCL20P78556 96 aa6.16□□□□□ -1.42
COL17A1-204ENST00000433822 AESQ08117 197 aa6.16□□□□□ -1.42
COL17A1-204ENST00000433822 ARL16Q0P5N6 197 aa6.16□□□□□ -1.42
COL17A1-204ENST00000433822 TMEM267Q0VDI3 215 aaPredicted RBP6.16□□□□□ -1.42
COL17A1-204ENST00000433822 LY6DQ14210 128 aa6.16□□□□□ -1.42
COL17A1-204ENST00000433822 HABP2Q14520 560 aaPredicted RBP6.16□□□□□ -1.42
COL17A1-204ENST00000433822 SSX2Q16385 188 aa6.16□□□□□ -1.42
COL17A1-204ENST00000433822 DEFB109BQ30KR1 87 aa6.16□□□□□ -1.42
COL17A1-204ENST00000433822 MORN2Q502X0 79 aa6.16□□□□□ -1.42
COL17A1-204ENST00000433822 PRAMEF6Q5VXH4 476 aa6.16□□□□□ -1.42
COL17A1-204ENST00000433822 FAM90A2PQ658T7 463 aa6.16□□□□□ -1.42
COL17A1-204ENST00000433822 HIST2H2BCQ6DN03 193 aa6.16□□□□□ -1.42
COL17A1-204ENST00000433822 HEPN1Q6WQI6 88 aa6.16□□□□□ -1.42
COL17A1-204ENST00000433822 H2BFWTQ7Z2G1 175 aa6.16□□□□□ -1.42
COL17A1-204ENST00000433822 ZNF429Q86V71 674 aa6.16□□□□□ -1.42
COL17A1-204ENST00000433822 OR52L2PQ8NGH6 319 aa6.16□□□□□ -1.42
COL17A1-204ENST00000433822 OR13A1Q8NGR1 328 aa6.16□□□□□ -1.42
COL17A1-204ENST00000433822 FAM57AQ8TBR7 257 aa6.16□□□□□ -1.42
COL17A1-204ENST00000433822 MRGPRDQ8TDS7 321 aa6.16□□□□□ -1.42
COL17A1-204ENST00000433822 DTD1Q8TEA8 209 aa6.16□□□□□ -1.42
COL17A1-204ENST00000433822 LRRC29Q8WV35 223 aa6.16□□□□□ -1.42
COL17A1-204ENST00000433822 TCTEX1D2Q8WW35 142 aa6.16□□□□□ -1.42
COL17A1-204ENST00000433822 CORO2AQ92828 525 aa6.16□□□□□ -1.42
COL17A1-204ENST00000433822 RAB1CQ92928 201 aa6.16□□□□□ -1.42
COL17A1-204ENST00000433822 SDSLQ96GA7 329 aa6.16□□□□□ -1.42
COL17A1-204ENST00000433822 OR4C12Q96R67 309 aa6.16□□□□□ -1.42
COL17A1-204ENST00000433822 GPHA2Q96T91 129 aa6.16□□□□□ -1.42
COL17A1-204ENST00000433822 KCNIP2Q9NS61 270 aa6.16□□□□□ -1.42
COL17A1-204ENST00000433822 IL19Q9UHD0 177 aa6.16□□□□□ -1.42
COL17A1-204ENST00000433822 F8P00451 2351 aa6.16□□□□□ -1.42
COL17A1-204ENST00000433822 IGKV1D-17A0A075B6S4 117 aa6.15□□□□□ -1.42
COL17A1-204ENST00000433822 TRAV39A0A0B4J263 110 aa6.15□□□□□ -1.42
COL17A1-204ENST00000433822 SMCO3A2RU48 225 aa6.15□□□□□ -1.42
COL17A1-204ENST00000433822 MAP1LC3B2A6NCE7 125 aa6.15□□□□□ -1.42
COL17A1-204ENST00000433822 MARCH11A6NNE9 402 aa6.15□□□□□ -1.42
COL17A1-204ENST00000433822 C17orf98A8MV24 154 aa6.15□□□□□ -1.42
COL17A1-204ENST00000433822 SEC14L6B5MCN3 397 aa6.15□□□□□ -1.42
COL17A1-204ENST00000433822 WNT9BO14905 357 aa6.15□□□□□ -1.42
COL17A1-204ENST00000433822 AGFG2O95081 481 aa6.15□□□□□ -1.42
COL17A1-204ENST00000433822 S1PR2O95136 353 aa6.15□□□□□ -1.42
COL17A1-204ENST00000433822 OR2C1O95371 312 aa6.15□□□□□ -1.42
COL17A1-204ENST00000433822 IFNA17P01571 189 aa6.15□□□□□ -1.42
COL17A1-204ENST00000433822 IGHV2-5P01817 119 aa6.15□□□□□ -1.42
COL17A1-204ENST00000433822 CD55P08174 381 aa6.15□□□□□ -1.42
COL17A1-204ENST00000433822 SMIM6P0DI80 62 aa6.15□□□□□ -1.42
COL17A1-204ENST00000433822 OR13C7P0DN81 318 aa6.15□□□□□ -1.42
COL17A1-204ENST00000433822 IAPPP10997 89 aa6.15□□□□□ -1.42
COL17A1-204ENST00000433822 ZNF16P17020 682 aaPredicted RBP6.15□□□□□ -1.42
COL17A1-204ENST00000433822 GLIPR1P48060 266 aa6.15□□□□□ -1.42
COL17A1-204ENST00000433822 FABP6P51161 128 aa6.15□□□□□ -1.42
COL17A1-204ENST00000433822 LOXL3P58215 753 aa6.15□□□□□ -1.42
COL17A1-204ENST00000433822 SPCS3P61009 180 aa6.15□□□□□ -1.42
COL17A1-204ENST00000433822 DLK1P80370 383 aa6.15□□□□□ -1.42
COL17A1-204ENST00000433822 SRSF6Q13247 344 aaKnown RBP6.15□□□□□ -1.42
COL17A1-204ENST00000433822 ZNF726P1Q15940 193 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms