RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 MRPL27Q9P0M9 148 aaKnown RBP3.19□□□□□ -1.9
SHPRH-205ENST00000433355 ERVH48-1M5A8F1 160 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 ENSAO43768 121 aaKnown RBP3.19□□□□□ -1.9
SHPRH-205ENST00000433355 PPIAL4GP0DN37 164 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 SPSB3Q6PJ21 355 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 BCDIN3DQ7Z5W3 292 aaKnown RBP3.19□□□□□ -1.9
SHPRH-205ENST00000433355 COMTD1Q86VU5 262 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 OR52B4Q8NGK2 314 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 FAM57AQ8TBR7 257 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 RCC1LQ96I51 464 aaKnown RBP3.19□□□□□ -1.9
SHPRH-205ENST00000433355 FTH1P19P0C7X4 201 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 EDN3P14138 238 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 GNB3P16520 340 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 LGALS4P56470 323 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 B2MP61769 119 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 EFNB3Q15768 340 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 TGIF2LXQ8IUE1 241 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 OR4D10Q8NGI6 311 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 OR5D18Q8NGL1 313 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 NPCDR1Q9BY65 106 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 SAMD10Q9BYL1 202 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 A8MU76 341 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 GALR1P47211 349 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 PRCDQ00LT1 54 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 LCN15Q6UWW0 184 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 OR8B3Q8NGG8 313 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 LRRC29Q8WV35 223 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 TAF15Q92804 592 aaKnown RBP eCLIP3.19□□□□□ -1.9
SHPRH-205ENST00000433355 OR8B2Q96RD0 313 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 OSTCQ9NRP0 149 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 TMEM14CQ9P0S9 112 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 ZMAT5Q9UDW3 170 aaKnown RBP3.19□□□□□ -1.9
SHPRH-205ENST00000433355 RNF115Q9Y4L5 304 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 ZNF98A6NK75 572 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 C4orf17Q53FE4 359 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 DCAF12L2Q5VW00 463 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 TMPRSS7Q7RTY8 843 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 C6orf201Q7Z4U5 140 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 OR13C5Q8NGS8 318 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 COL25A1Q9BXS0 654 aaPredicted RBP3.19□□□□□ -1.9
SHPRH-205ENST00000433355 NIPBLQ6KC79 2804 aaeCLIP3.19□□□□□ -1.9
SHPRH-205ENST00000433355 A0A0G2JLM5 398 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 C7orf77A4D0Y5 90 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 A6NDN8 102 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 ADAM20O43506 726 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 CMC4P56277 68 aaPredicted RBP3.19□□□□□ -1.9
SHPRH-205ENST00000433355 RPL15P61313 204 aaKnown RBP3.19□□□□□ -1.9
SHPRH-205ENST00000433355 RPL31P62899 125 aaKnown RBP3.19□□□□□ -1.9
SHPRH-205ENST00000433355 DUSP2Q05923 314 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 PLAC9Q5JTB6 97 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 RBMXL3Q8N7X1 1067 aaKnown RBP3.19□□□□□ -1.9
SHPRH-205ENST00000433355 PLPPR1Q8TBJ4 325 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 RDH5Q92781 318 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 SRD5A3Q9H8P0 318 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 CALYQ9NYX4 217 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 KLHDC2Q9Y2U9 406 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 PPIAL4EA0A075B759 164 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 PPIAL4CA0A0B4J2A2 164 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 IGHV2OR16-5A0A0B4J2B6 119 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 LOC102723971A0A1B0GUV8 181 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 ARGFXA6NJG6 315 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 PPIAL4DF5H284 164 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 PPIAL4FP0DN26 164 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 OR13C7P0DN81 318 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 CCNOP22674 350 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 FCGR2BP31994 310 aaPredicted RBP3.19□□□□□ -1.9
SHPRH-205ENST00000433355 SFRP5Q5T4F7 317 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 MEX3DQ86XN8 651 aaKnown RBP3.19□□□□□ -1.9
SHPRH-205ENST00000433355 TMEM251Q8N6I4 163 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 SCCPDHQ8NBX0 429 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 PRSS50Q9UI38 385 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 NEURL1O76050 574 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.19□□□□□ -1.9
SHPRH-205ENST00000433355 TUSC5Q8IXB3 177 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 ZMAT3Q9HA38 289 aaKnown RBP3.19□□□□□ -1.9
SHPRH-205ENST00000433355 CA6P23280 308 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 CEACAM6P40199 344 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 B3GALT5-AS1P59052 145 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 TNFAIP6P98066 277 aaPredicted RBP3.18□□□□□ -1.9
SHPRH-205ENST00000433355 RIGQ13278 110 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 ADIRFQ15847 76 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 PRSS53Q2L4Q9 553 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 ZNF674Q2M3X9 581 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 ZFP82Q8N141 532 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 RFLNBQ8N5W9 214 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 DPF1Q92782 380 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 GNB1LQ9BYB4 327 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 A0A1B0GTH9 108 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 UMODP07911 640 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 RCC1P18754 421 aaPredicted RBP3.18□□□□□ -1.9
SHPRH-205ENST00000433355 TSPOP30536 169 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 PLAURQ03405 335 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 TEX36Q5VZQ5 186 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 TEX45Q8NA69 505 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 OPN3Q9H1Y3 402 aaPredicted RBP3.18□□□□□ -1.9
SHPRH-205ENST00000433355 WFDC1Q9HC57 220 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 FUT9Q9Y231 359 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 MEIS3P1A6NDR6 274 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 H3BQ15 152 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 CBLN2Q8IUK8 224 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms