RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 MLF2Q15773 248 aaPredicted RBP7.47□□□□□ -1.21
CDC42BPA-206ENST00000429440 ADIPOQQ15848 244 aa7.47□□□□□ -1.21
CDC42BPA-206ENST00000429440 FAM162BQ5T6X4 162 aa7.47□□□□□ -1.21
CDC42BPA-206ENST00000429440 C8orf86Q6ZUL3 223 aa7.47□□□□□ -1.21
CDC42BPA-206ENST00000429440 MOB1BQ7L9L4 216 aa7.47□□□□□ -1.21
CDC42BPA-206ENST00000429440 OR10G9Q8NGN4 311 aa7.47□□□□□ -1.21
CDC42BPA-206ENST00000429440 OR10G7Q8NGN6 311 aa7.47□□□□□ -1.21
CDC42BPA-206ENST00000429440 OCC1Q8TAD7 63 aa7.47□□□□□ -1.21
CDC42BPA-206ENST00000429440 OR4C12Q96R67 309 aa7.47□□□□□ -1.21
CDC42BPA-206ENST00000429440 SPAG8Q99932 426 aaPredicted RBP7.47□□□□□ -1.21
CDC42BPA-206ENST00000429440 CITED2Q99967 270 aaPredicted RBP7.47□□□□□ -1.21
CDC42BPA-206ENST00000429440 C19orf24Q9BVV8 132 aa7.47□□□□□ -1.21
CDC42BPA-206ENST00000429440 SLC25A22Q9H936 323 aa7.47□□□□□ -1.21
CDC42BPA-206ENST00000429440 CENPMQ9NSP4 180 aa7.47□□□□□ -1.21
CDC42BPA-206ENST00000429440 CLCF1Q9UBD9 225 aa7.47□□□□□ -1.21
CDC42BPA-206ENST00000429440 MT-ATP6P00846 226 aa7.46□□□□□ -1.21
CDC42BPA-206ENST00000429440 AMY1AP04745 511 aa7.46□□□□□ -1.21
CDC42BPA-206ENST00000429440 FRMD6-AS1P0C7T7 363 aa7.46□□□□□ -1.21
CDC42BPA-206ENST00000429440 CTLA4P16410 223 aa7.46□□□□□ -1.21
CDC42BPA-206ENST00000429440 ZNF823P16415 610 aa7.46□□□□□ -1.21
CDC42BPA-206ENST00000429440 COX5AP20674 150 aa7.46□□□□□ -1.21
CDC42BPA-206ENST00000429440 RPL27P61353 136 aaKnown RBP7.46□□□□□ -1.21
CDC42BPA-206ENST00000429440 KIR3DS1Q14943 382 aa7.46□□□□□ -1.21
CDC42BPA-206ENST00000429440 PRICKLE4Q2TBC4 344 aa7.46□□□□□ -1.21
CDC42BPA-206ENST00000429440 SLC35E4Q6ICL7 350 aa7.46□□□□□ -1.21
CDC42BPA-206ENST00000429440 C6orf201Q7Z4U5 140 aa7.46□□□□□ -1.21
CDC42BPA-206ENST00000429440 NEU4Q8WWR8 484 aaPredicted RBP7.46□□□□□ -1.21
CDC42BPA-206ENST00000429440 SPANXA1Q9NS26 97 aa7.46□□□□□ -1.21
CDC42BPA-206ENST00000429440 LHFPL6Q9Y693 200 aa7.46□□□□□ -1.21
CDC42BPA-206ENST00000429440 PHF3Q92576 2039 aaKnown RBP7.46□□□□□ -1.22
CDC42BPA-206ENST00000429440 TNRC6AQ8NDV7 1962 aaKnown RBP7.46□□□□□ -1.22
CDC42BPA-206ENST00000429440 hDV102S1A0JD36 115 aa7.46□□□□□ -1.22
CDC42BPA-206ENST00000429440 PGPEP1LA6NFU8 196 aa7.46□□□□□ -1.22
CDC42BPA-206ENST00000429440 PRR19A6NJB7 356 aa7.46□□□□□ -1.22
CDC42BPA-206ENST00000429440 SYS1-DBNDD2H3BUS1 97 aa7.46□□□□□ -1.22
CDC42BPA-206ENST00000429440 ARL16Q0P5N6 197 aa7.46□□□□□ -1.22
CDC42BPA-206ENST00000429440 NRN1LQ496H8 165 aa7.46□□□□□ -1.22
CDC42BPA-206ENST00000429440 SLC25A47Q6Q0C1 308 aa7.46□□□□□ -1.22
CDC42BPA-206ENST00000429440 LHFPL2Q6ZUX7 228 aa7.46□□□□□ -1.22
CDC42BPA-206ENST00000429440 TPRX1Q8N7U7 411 aa7.46□□□□□ -1.22
CDC42BPA-206ENST00000429440 OR2A1Q8NGT9 310 aa7.46□□□□□ -1.22
CDC42BPA-206ENST00000429440 OR10D3Q8NH80 312 aa7.46□□□□□ -1.22
CDC42BPA-206ENST00000429440 FOXQ1Q9C009 403 aa7.46□□□□□ -1.22
CDC42BPA-206ENST00000429440 TBC1D29Q9UFV1 150 aa7.46□□□□□ -1.22
CDC42BPA-206ENST00000429440 hADV38S2A0JD32 116 aa7.45□□□□□ -1.22
CDC42BPA-206ENST00000429440 HELTA6NFD8 242 aa7.45□□□□□ -1.22
CDC42BPA-206ENST00000429440 FBLL1A6NHQ2 334 aaKnown RBP7.45□□□□□ -1.22
CDC42BPA-206ENST00000429440 CD300LBA8K4G0 201 aa7.45□□□□□ -1.22
CDC42BPA-206ENST00000429440 H3BP45 60 aa7.45□□□□□ -1.22
CDC42BPA-206ENST00000429440 APOA2P02652 100 aa7.45□□□□□ -1.22
CDC42BPA-206ENST00000429440 STATHP02808 62 aa7.45□□□□□ -1.22
CDC42BPA-206ENST00000429440 FREM3P0C091 2139 aa7.45□□□□□ -1.22
CDC42BPA-206ENST00000429440 ID1P41134 155 aa7.45□□□□□ -1.22
CDC42BPA-206ENST00000429440 FAM53BQ14153 422 aa7.45□□□□□ -1.22
CDC42BPA-206ENST00000429440 TIMM23BQ5SRD1 257 aa7.45□□□□□ -1.22
CDC42BPA-206ENST00000429440 RAB42Q8N4Z0 105 aa7.45□□□□□ -1.22
CDC42BPA-206ENST00000429440 TMEM251Q8N6I4 163 aa7.45□□□□□ -1.22
CDC42BPA-206ENST00000429440 LMX1AQ8TE12 382 aa7.45□□□□□ -1.22
CDC42BPA-206ENST00000429440 VGLL1Q99990 258 aa7.45□□□□□ -1.22
CDC42BPA-206ENST00000429440 NDFIP1Q9BT67 221 aa7.45□□□□□ -1.22
CDC42BPA-206ENST00000429440 GGTLC1Q9BX51 225 aa7.45□□□□□ -1.22
CDC42BPA-206ENST00000429440 PLA2G2FQ9BZM2 168 aa7.45□□□□□ -1.22
CDC42BPA-206ENST00000429440 B5MCH6 92 aa7.45□□□□□ -1.22
CDC42BPA-206ENST00000429440 C9JCJ5 164 aa7.45□□□□□ -1.22
CDC42BPA-206ENST00000429440 HMGB3O15347 200 aaKnown RBP7.45□□□□□ -1.22
CDC42BPA-206ENST00000429440 APCSP02743 223 aa7.45□□□□□ -1.22
CDC42BPA-206ENST00000429440 SPINK8P0C7L1 97 aa7.45□□□□□ -1.22
CDC42BPA-206ENST00000429440 RASL11AQ6T310 242 aa7.45□□□□□ -1.22
CDC42BPA-206ENST00000429440 TBC1D26Q86UD7 250 aa7.45□□□□□ -1.22
CDC42BPA-206ENST00000429440 WDR5BQ86VZ2 330 aa7.45□□□□□ -1.22
CDC42BPA-206ENST00000429440 GCSAMQ8N6F7 178 aa7.45□□□□□ -1.22
CDC42BPA-206ENST00000429440 OR5D13Q8NGL4 314 aa7.45□□□□□ -1.22
CDC42BPA-206ENST00000429440 OR51E1Q8TCB6 317 aa7.45□□□□□ -1.22
CDC42BPA-206ENST00000429440 PP6455Q8WZ26 134 aa7.45□□□□□ -1.22
CDC42BPA-206ENST00000429440 HDHD3Q9BSH5 251 aaPredicted RBP7.45□□□□□ -1.22
CDC42BPA-206ENST00000429440 V9GYV3 84 aa7.45□□□□□ -1.22
CDC42BPA-206ENST00000429440 SHANK1Q9Y566 2161 aa7.45□□□□□ -1.22
CDC42BPA-206ENST00000429440 TRIOO75962 3097 aa7.45□□□□□ -1.22
CDC42BPA-206ENST00000429440 F5P12259 2224 aa7.45□□□□□ -1.22
CDC42BPA-206ENST00000429440 LRRC30A6NM36 301 aa7.44□□□□□ -1.22
CDC42BPA-206ENST00000429440 NKX2-8O15522 239 aa7.44□□□□□ -1.22
CDC42BPA-206ENST00000429440 ANGPTL7O43827 346 aa7.44□□□□□ -1.22
CDC42BPA-206ENST00000429440 CA3P07451 260 aa7.44□□□□□ -1.22
CDC42BPA-206ENST00000429440 HLA-DOBP13765 273 aa7.44□□□□□ -1.22
CDC42BPA-206ENST00000429440 EGR1P18146 543 aa7.44□□□□□ -1.22
CDC42BPA-206ENST00000429440 OTX2P32243 289 aa7.44□□□□□ -1.22
CDC42BPA-206ENST00000429440 PSG7Q13046 419 aa7.44□□□□□ -1.22
CDC42BPA-206ENST00000429440 OR4A16Q8NH70 328 aa7.44□□□□□ -1.22
CDC42BPA-206ENST00000429440 OR10G6Q8NH81 332 aa7.44□□□□□ -1.22
CDC42BPA-206ENST00000429440 ANAPC13Q9BS18 74 aa7.44□□□□□ -1.22
CDC42BPA-206ENST00000429440 TXNIPQ9H3M7 391 aa7.44□□□□□ -1.22
CDC42BPA-206ENST00000429440 SAP30LQ9HAJ7 183 aa7.44□□□□□ -1.22
CDC42BPA-206ENST00000429440 CRIM1Q9NZV1 1036 aa7.44□□□□□ -1.22
CDC42BPA-206ENST00000429440 MYO9BQ13459 2157 aa7.44□□□□□ -1.22
CDC42BPA-206ENST00000429440 DXOO77932 396 aaKnown RBP7.44□□□□□ -1.22
CDC42BPA-206ENST00000429440 CA1P00915 261 aaPredicted RBP7.44□□□□□ -1.22
CDC42BPA-206ENST00000429440 IGKV1D-16P01601 117 aa7.44□□□□□ -1.22
CDC42BPA-206ENST00000429440 GRB2P62993 217 aaKnown RBP7.44□□□□□ -1.22
CDC42BPA-206ENST00000429440 MGAT2Q10469 447 aa7.44□□□□□ -1.22
CDC42BPA-206ENST00000429440 KISS1Q15726 138 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms