RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 MPPED1O15442 326 aa12.48□□□□□ -0.41
VARS-216ENST00000428445 AIREO43918 545 aa12.48□□□□□ -0.41
VARS-216ENST00000428445 OR2A4O95047 310 aa12.48□□□□□ -0.41
VARS-216ENST00000428445 IGHV3-23P01764 117 aa12.48□□□□□ -0.41
VARS-216ENST00000428445 FABP5Q01469 135 aa12.48□□□□□ -0.41
VARS-216ENST00000428445 ATP5G2Q06055 141 aa12.48□□□□□ -0.41
VARS-216ENST00000428445 OR2K2Q8NGT1 345 aa12.48□□□□□ -0.41
VARS-216ENST00000428445 OSR1Q8TAX0 266 aaPredicted RBP12.48□□□□□ -0.41
VARS-216ENST00000428445 DDB2Q92466 427 aa12.48□□□□□ -0.41
VARS-216ENST00000428445 ELF5Q9UKW6 265 aaPredicted RBP12.48□□□□□ -0.41
VARS-216ENST00000428445 RBM7Q9Y580 266 aaKnown RBP12.48□□□□□ -0.41
VARS-216ENST00000428445 A0A0B4J203 849 aa12.47□□□□□ -0.41
VARS-216ENST00000428445 HMX3A6NHT5 357 aa12.47□□□□□ -0.41
VARS-216ENST00000428445 CREBL2O60519 120 aaPredicted RBP12.47□□□□□ -0.41
VARS-216ENST00000428445 OR2J3O76001 311 aa12.47□□□□□ -0.41
VARS-216ENST00000428445 SLC22A5O76082 557 aa12.47□□□□□ -0.41
VARS-216ENST00000428445 JTBO76095 146 aa12.47□□□□□ -0.41
VARS-216ENST00000428445 TPPPO94811 219 aa12.47□□□□□ -0.41
VARS-216ENST00000428445 GALP22466 123 aa12.47□□□□□ -0.41
VARS-216ENST00000428445 CRHBPP24387 322 aa12.47□□□□□ -0.41
VARS-216ENST00000428445 DUTP33316 252 aaKnown RBP12.47□□□□□ -0.41
VARS-216ENST00000428445 UBE2KP61086 200 aa12.47□□□□□ -0.41
VARS-216ENST00000428445 GUCA2BQ16661 112 aa12.47□□□□□ -0.41
VARS-216ENST00000428445 DEFB114Q30KQ6 69 aa12.47□□□□□ -0.41
VARS-216ENST00000428445 VMA21Q3ZAQ7 101 aa12.47□□□□□ -0.41
VARS-216ENST00000428445 WDR89Q96FK6 387 aaPredicted RBP12.47□□□□□ -0.41
VARS-216ENST00000428445 ZNF430Q9H8G1 570 aaPredicted RBP12.47□□□□□ -0.41
VARS-216ENST00000428445 SRD5A3Q9H8P0 318 aa12.47□□□□□ -0.41
VARS-216ENST00000428445 PEMTQ9UBM1 199 aa12.47□□□□□ -0.41
VARS-216ENST00000428445 DMRT1Q9Y5R6 373 aa12.47□□□□□ -0.41
VARS-216ENST00000428445 S4R3C0 116 aa12.47□□□□□ -0.41
VARS-216ENST00000428445 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.46□□□□□ -0.41
VARS-216ENST00000428445 OR11H12B2RN74 326 aa12.46□□□□□ -0.41
VARS-216ENST00000428445 RAB27BO00194 218 aa12.46□□□□□ -0.41
VARS-216ENST00000428445 OR2C1O95371 312 aa12.46□□□□□ -0.41
VARS-216ENST00000428445 CTXN2P0C2S0 81 aa12.46□□□□□ -0.41
VARS-216ENST00000428445 HIST1H1DP16402 221 aaKnown RBP12.46□□□□□ -0.41
VARS-216ENST00000428445 TALDO1P37837 337 aa12.46□□□□□ -0.41
VARS-216ENST00000428445 OR10A3P58181 314 aa12.46□□□□□ -0.41
VARS-216ENST00000428445 OR2B11Q5JQS5 317 aa12.46□□□□□ -0.41
VARS-216ENST00000428445 VKORC1L1Q8N0U8 176 aa12.46□□□□□ -0.41
VARS-216ENST00000428445 DYNLRB2Q8TF09 96 aa12.46□□□□□ -0.41
VARS-216ENST00000428445 CACNG8Q8WXS5 425 aa12.46□□□□□ -0.41
VARS-216ENST00000428445 GINS4Q9BRT9 223 aa12.46□□□□□ -0.41
VARS-216ENST00000428445 CCDC90BQ9GZT6 254 aa12.46□□□□□ -0.41
VARS-216ENST00000428445 TRBV9A0A0B4J1U6 114 aa12.45□□□□□ -0.42
VARS-216ENST00000428445 FAM223BA6NKX1 122 aa12.45□□□□□ -0.42
VARS-216ENST00000428445 IFITM5A6NNB3 132 aa12.45□□□□□ -0.42
VARS-216ENST00000428445 MFNGO00587 321 aa12.45□□□□□ -0.42
VARS-216ENST00000428445 SAA1P0DJI8 122 aaPredicted RBP12.45□□□□□ -0.42
VARS-216ENST00000428445 FOLR2P14207 255 aa12.45□□□□□ -0.42
VARS-216ENST00000428445 MAP2K4P45985 399 aa12.45□□□□□ -0.42
VARS-216ENST00000428445 SLC25A42Q86VD7 318 aa12.45□□□□□ -0.42
VARS-216ENST00000428445 FAM223AQ8IWN6 122 aa12.45□□□□□ -0.42
VARS-216ENST00000428445 SPIN2AQ99865 258 aa12.45□□□□□ -0.42
VARS-216ENST00000428445 SPIN2BQ9BPZ2 258 aa12.45□□□□□ -0.42
VARS-216ENST00000428445 DCUN1D5Q9BTE7 237 aa12.45□□□□□ -0.42
VARS-216ENST00000428445 SLC2A8Q9NY64 477 aa12.45□□□□□ -0.42
VARS-216ENST00000428445 C2orf70A6NJV1 201 aa12.44□□□□□ -0.42
VARS-216ENST00000428445 E7EUB6 86 aa12.44□□□□□ -0.42
VARS-216ENST00000428445 FCGR3BO75015 233 aa12.44□□□□□ -0.42
VARS-216ENST00000428445 DTYMKP23919 212 aa12.44□□□□□ -0.42
VARS-216ENST00000428445 KIR2DS2P43631 304 aa12.44□□□□□ -0.42
VARS-216ENST00000428445 AQP4P55087 323 aa12.44□□□□□ -0.42
VARS-216ENST00000428445 RPL30P62888 115 aaKnown RBP12.44□□□□□ -0.42
VARS-216ENST00000428445 TBCEQ15813 527 aaPredicted RBP12.44□□□□□ -0.42
VARS-216ENST00000428445 C15orf32Q32M92 178 aa12.44□□□□□ -0.42
VARS-216ENST00000428445 H1FOOQ8IZA3 346 aaPredicted RBP12.44□□□□□ -0.42
VARS-216ENST00000428445 TTC9CQ8N5M4 171 aa12.44□□□□□ -0.42
VARS-216ENST00000428445 VCX3BQ9H321 246 aa12.44□□□□□ -0.42
VARS-216ENST00000428445 BLOC1S6Q9UL45 172 aa12.44□□□□□ -0.42
VARS-216ENST00000428445 FRAS1Q86XX4 4008 aa12.43□□□□□ -0.42
VARS-216ENST00000428445 TRDV1A0A1B0GX56 115 aa12.43□□□□□ -0.42
VARS-216ENST00000428445 ACTL6BO94805 426 aa12.43□□□□□ -0.42
VARS-216ENST00000428445 RAB3BP20337 219 aa12.43□□□□□ -0.42
VARS-216ENST00000428445 MYL9P24844 172 aa12.43□□□□□ -0.42
VARS-216ENST00000428445 ARFRP1Q13795 201 aa12.43□□□□□ -0.42
VARS-216ENST00000428445 CDK10Q15131 360 aa12.43□□□□□ -0.42
VARS-216ENST00000428445 ZNF367Q7RTV3 350 aa12.43□□□□□ -0.42
VARS-216ENST00000428445 LAX1Q8IWV1 398 aa12.43□□□□□ -0.42
VARS-216ENST00000428445 MMD2Q8IY49 270 aa12.43□□□□□ -0.42
VARS-216ENST00000428445 KCTD12Q96CX2 325 aaKnown RBP12.43□□□□□ -0.42
VARS-216ENST00000428445 DCSTAMPQ9H295 470 aa12.43□□□□□ -0.42
VARS-216ENST00000428445 NKX1-2Q9UD57 310 aaPredicted RBP12.43□□□□□ -0.42
VARS-216ENST00000428445 PRELID3BQ9Y3B1 194 aa12.43□□□□□ -0.42
VARS-216ENST00000428445 A0A1B0GW64 132 aa12.42□□□□□ -0.42
VARS-216ENST00000428445 MRPS14O60783 128 aaKnown RBP12.42□□□□□ -0.42
VARS-216ENST00000428445 TUSC2O75896 110 aa12.42□□□□□ -0.42
VARS-216ENST00000428445 SCGNO76038 276 aa12.42□□□□□ -0.42
VARS-216ENST00000428445 NDUFB8O95169 186 aa12.42□□□□□ -0.42
VARS-216ENST00000428445 MYOD1P15172 320 aa12.42□□□□□ -0.42
VARS-216ENST00000428445 HSPA13P48723 471 aa12.42□□□□□ -0.42
VARS-216ENST00000428445 ZNF645Q8N7E2 425 aa12.42□□□□□ -0.42
VARS-216ENST00000428445 NECAP1Q8NC96 275 aa12.42□□□□□ -0.42
VARS-216ENST00000428445 IL17DQ8TAD2 202 aa12.42□□□□□ -0.42
VARS-216ENST00000428445 GPHA2Q96T91 129 aa12.42□□□□□ -0.42
VARS-216ENST00000428445 ZC4H2Q9NQZ6 224 aa12.42□□□□□ -0.42
VARS-216ENST00000428445 FBXL7Q9UJT9 491 aa12.42□□□□□ -0.42
VARS-216ENST00000428445 SMIM30A4D0T7 59 aa12.41□□□□□ -0.42
VARS-216ENST00000428445 TEX22C9J3V5 150 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms