RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 S4R3C0 116 aa10.91□□□□□ -0.66
PDAP1-202ENST00000426447 TRAV25A0A0B4J276 109 aa10.9□□□□□ -0.66
PDAP1-202ENST00000426447 TMEM213A2RRL7 107 aa10.9□□□□□ -0.66
PDAP1-202ENST00000426447 HMX3A6NHT5 357 aa10.9□□□□□ -0.66
PDAP1-202ENST00000426447 FABP7O15540 132 aa10.9□□□□□ -0.66
PDAP1-202ENST00000426447 WNT4P56705 351 aa10.9□□□□□ -0.66
PDAP1-202ENST00000426447 CDK10Q15131 360 aa10.9□□□□□ -0.66
PDAP1-202ENST00000426447 P2RY14Q15391 338 aa10.9□□□□□ -0.66
PDAP1-202ENST00000426447 IGSF11Q5DX21 431 aa10.9□□□□□ -0.66
PDAP1-202ENST00000426447 C10orf55Q5SWW7 151 aa10.9□□□□□ -0.66
PDAP1-202ENST00000426447 C10orf67Q8IYJ2 551 aa10.9□□□□□ -0.66
PDAP1-202ENST00000426447 FAM89BQ8N5H3 189 aa10.9□□□□□ -0.66
PDAP1-202ENST00000426447 OR2C3Q8N628 320 aa10.9□□□□□ -0.66
PDAP1-202ENST00000426447 OR6M1Q8NGM8 313 aa10.9□□□□□ -0.66
PDAP1-202ENST00000426447 OSR1Q8TAX0 266 aaPredicted RBP10.9□□□□□ -0.66
PDAP1-202ENST00000426447 PHYHIPQ92561 330 aa10.9□□□□□ -0.66
PDAP1-202ENST00000426447 RNF183Q96D59 192 aa10.9□□□□□ -0.66
PDAP1-202ENST00000426447 PECRQ9BY49 303 aa10.9□□□□□ -0.66
PDAP1-202ENST00000426447 PLGRKTQ9HBL7 147 aa10.9□□□□□ -0.66
PDAP1-202ENST00000426447 SMPD3Q9NY59 655 aaPredicted RBP10.9□□□□□ -0.66
PDAP1-202ENST00000426447 UBQLN2Q9UHD9 624 aa10.9□□□□□ -0.66
PDAP1-202ENST00000426447 ZNF257Q9Y2Q1 563 aa10.9□□□□□ -0.66
PDAP1-202ENST00000426447 KMT2AQ03164 3969 aa10.9□□□□□ -0.67
PDAP1-202ENST00000426447 IFNA4P05014 189 aa10.89□□□□□ -0.67
PDAP1-202ENST00000426447 GSTT2P0CG29 244 aa10.89□□□□□ -0.67
PDAP1-202ENST00000426447 GSTT2BP0CG30 244 aa10.89□□□□□ -0.67
PDAP1-202ENST00000426447 TMEM50BP56557 158 aa10.89□□□□□ -0.67
PDAP1-202ENST00000426447 ZNF585BQ52M93 769 aa10.89□□□□□ -0.67
PDAP1-202ENST00000426447 HSD17B12Q53GQ0 312 aa10.89□□□□□ -0.67
PDAP1-202ENST00000426447 CEACAM19Q7Z692 300 aa10.89□□□□□ -0.67
PDAP1-202ENST00000426447 MS4A15Q8N5U1 240 aa10.89□□□□□ -0.67
PDAP1-202ENST00000426447 EEF1AKMT3Q96AZ1 226 aa10.89□□□□□ -0.67
PDAP1-202ENST00000426447 PCLOQ9Y6V0 5065 aa10.89□□□□□ -0.67
PDAP1-202ENST00000426447 A8MWP6 167 aa10.88□□□□□ -0.67
PDAP1-202ENST00000426447 DHFRP00374 187 aa10.88□□□□□ -0.67
PDAP1-202ENST00000426447 SAA1P0DJI8 122 aaPredicted RBP10.88□□□□□ -0.67
PDAP1-202ENST00000426447 DUTP33316 252 aaKnown RBP10.88□□□□□ -0.67
PDAP1-202ENST00000426447 MARC2Q969Z3 335 aa10.88□□□□□ -0.67
PDAP1-202ENST00000426447 C5orf30Q96GV9 206 aa10.88□□□□□ -0.67
PDAP1-202ENST00000426447 FYTTD1Q96QD9 318 aaKnown RBP10.88□□□□□ -0.67
PDAP1-202ENST00000426447 GINS4Q9BRT9 223 aa10.88□□□□□ -0.67
PDAP1-202ENST00000426447 TRBV6-7A0A0A0MS04 114 aa10.87□□□□□ -0.67
PDAP1-202ENST00000426447 KIR2DL5BA0A0G2JN68 375 aa10.87□□□□□ -0.67
PDAP1-202ENST00000426447 KIR2DL5BA0A0G2JPC4 375 aa10.87□□□□□ -0.67
PDAP1-202ENST00000426447 LINC00473A8K010 186 aa10.87□□□□□ -0.67
PDAP1-202ENST00000426447 FCGR3BO75015 233 aa10.87□□□□□ -0.67
PDAP1-202ENST00000426447 CLEC3BP05452 202 aa10.87□□□□□ -0.67
PDAP1-202ENST00000426447 RPL35AP18077 110 aaKnown RBP10.87□□□□□ -0.67
PDAP1-202ENST00000426447 MED22Q15528 200 aa10.87□□□□□ -0.67
PDAP1-202ENST00000426447 C19orf35Q6ZS72 473 aa10.87□□□□□ -0.67
PDAP1-202ENST00000426447 KIR2DL5AQ8N109 375 aa10.87□□□□□ -0.67
PDAP1-202ENST00000426447 SETD9Q8NE22 299 aa10.87□□□□□ -0.67
PDAP1-202ENST00000426447 OR56B1Q8NGI3 324 aa10.87□□□□□ -0.67
PDAP1-202ENST00000426447 KIR2DL5BQ8NHK3 375 aa10.87□□□□□ -0.67
PDAP1-202ENST00000426447 FBLIM1Q8WUP2 373 aa10.87□□□□□ -0.67
PDAP1-202ENST00000426447 CYGBQ8WWM9 190 aa10.87□□□□□ -0.67
PDAP1-202ENST00000426447 CCDC140Q96MF4 163 aa10.87□□□□□ -0.67
PDAP1-202ENST00000426447 OR51E2Q9H255 320 aa10.87□□□□□ -0.67
PDAP1-202ENST00000426447 MRPL27Q9P0M9 148 aaKnown RBP10.87□□□□□ -0.67
PDAP1-202ENST00000426447 NPIPB5A8MRT5 1133 aa10.86□□□□□ -0.67
PDAP1-202ENST00000426447 FOXI3A8MTJ6 420 aaPredicted RBP10.86□□□□□ -0.67
PDAP1-202ENST00000426447 DEFA4P12838 97 aa10.86□□□□□ -0.67
PDAP1-202ENST00000426447 PLAC9Q5JTB6 97 aa10.86□□□□□ -0.67
PDAP1-202ENST00000426447 NANOGP1Q8N7R0 232 aa10.86□□□□□ -0.67
PDAP1-202ENST00000426447 SPAG8Q99932 426 aaPredicted RBP10.86□□□□□ -0.67
PDAP1-202ENST00000426447 CABLES2Q9BTV7 478 aa10.86□□□□□ -0.67
PDAP1-202ENST00000426447 SLC2A9Q9NRM0 540 aa10.86□□□□□ -0.67
PDAP1-202ENST00000426447 FBXL17Q9UF56 701 aa10.86□□□□□ -0.67
PDAP1-202ENST00000426447 UFC1Q9Y3C8 167 aa10.86□□□□□ -0.67
PDAP1-202ENST00000426447 TRBV7-1A0A0A6YYK4 115 aa10.85□□□□□ -0.67
PDAP1-202ENST00000426447 TEX22C9J3V5 150 aa10.85□□□□□ -0.67
PDAP1-202ENST00000426447 J3QRK9 145 aa10.85□□□□□ -0.67
PDAP1-202ENST00000426447 C8orf88P0DMB2 117 aa10.85□□□□□ -0.67
PDAP1-202ENST00000426447 CD37P11049 281 aa10.85□□□□□ -0.67
PDAP1-202ENST00000426447 HIST1H1BP16401 226 aaKnown RBP10.85□□□□□ -0.67
PDAP1-202ENST00000426447 RPL27AP46776 148 aaKnown RBP10.85□□□□□ -0.67
PDAP1-202ENST00000426447 PRR20EP86478 221 aa10.85□□□□□ -0.67
PDAP1-202ENST00000426447 PRR20CP86479 221 aa10.85□□□□□ -0.67
PDAP1-202ENST00000426447 PRR20DP86480 221 aa10.85□□□□□ -0.67
PDAP1-202ENST00000426447 PRR20BP86481 221 aa10.85□□□□□ -0.67
PDAP1-202ENST00000426447 PRR20AP86496 221 aa10.85□□□□□ -0.67
PDAP1-202ENST00000426447 RBMS2Q15434 407 aaKnown RBP10.85□□□□□ -0.67
PDAP1-202ENST00000426447 RAB11BQ15907 218 aa10.85□□□□□ -0.67
PDAP1-202ENST00000426447 LAMTOR1Q6IAA8 161 aa10.85□□□□□ -0.67
PDAP1-202ENST00000426447 UNQ9165/PRO28630Q6UXU0 137 aa10.85□□□□□ -0.67
PDAP1-202ENST00000426447 AHSA2Q719I0 299 aa10.85□□□□□ -0.67
PDAP1-202ENST00000426447 VKORC1L1Q8N0U8 176 aa10.85□□□□□ -0.67
PDAP1-202ENST00000426447 PQLC1Q8N2U9 271 aa10.85□□□□□ -0.67
PDAP1-202ENST00000426447 C11orf45Q8TAV5 145 aa10.85□□□□□ -0.67
PDAP1-202ENST00000426447 MAFIPQ8WZ33 124 aa10.85□□□□□ -0.67
PDAP1-202ENST00000426447 FANCD2OSQ96PS1 177 aa10.85□□□□□ -0.67
PDAP1-202ENST00000426447 MFFQ9GZY8 342 aa10.85□□□□□ -0.67
PDAP1-202ENST00000426447 C5orf66Q9H5L9 145 aa10.85□□□□□ -0.67
PDAP1-202ENST00000426447 PRELID3BQ9Y3B1 194 aa10.85□□□□□ -0.67
PDAP1-202ENST00000426447 IGHV3-35A0A0C4DH35 117 aa10.84□□□□□ -0.67
PDAP1-202ENST00000426447 SLC17A2O00624 439 aa10.84□□□□□ -0.67
PDAP1-202ENST00000426447 DENRO43583 198 aaKnown RBP10.84□□□□□ -0.67
PDAP1-202ENST00000426447 FCGR3AP08637 254 aa10.84□□□□□ -0.67
PDAP1-202ENST00000426447 IL6RP08887 468 aaPredicted RBP10.84□□□□□ -0.67
PDAP1-202ENST00000426447 MYOD1P15172 320 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms