RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, human

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COL12A1-205	ENST00000425443	ZNF880	Q6PDB4	577 aa		10.91	□□□□□ -0.66
COL12A1-205	ENST00000425443	TEX38	Q6PEX7	206 aa		10.91	□□□□□ -0.66
COL12A1-205	ENST00000425443	RFESD	Q8TAC1	157 aa		10.91	□□□□□ -0.66
COL12A1-205	ENST00000425443	IL22RA2	Q969J5	263 aa		10.91	□□□□□ -0.66
COL12A1-205	ENST00000425443	ABHD14B	Q96IU4	210 aa		10.91	□□□□□ -0.66
COL12A1-205	ENST00000425443	DEFB108A	A8MXU0	73 aa		10.9	□□□□□ -0.66
COL12A1-205	ENST00000425443	SYNGR2	O43760	224 aa		10.9	□□□□□ -0.66
COL12A1-205	ENST00000425443	WISP2	O76076	250 aa		10.9	□□□□□ -0.66
COL12A1-205	ENST00000425443	MPV17	P39210	176 aa		10.9	□□□□□ -0.66
COL12A1-205	ENST00000425443	SELENOT	P62341	195 aa		10.9	□□□□□ -0.66
COL12A1-205	ENST00000425443	DEFB109B	Q30KR1	87 aa		10.9	□□□□□ -0.66
COL12A1-205	ENST00000425443	ZNF585B	Q52M93	769 aa		10.9	□□□□□ -0.66
COL12A1-205	ENST00000425443	ZNF525	Q8N782	197 aa		10.9	□□□□□ -0.66
COL12A1-205	ENST00000425443	HIST1H2BL	Q99880	126 aa		10.9	□□□□□ -0.66
COL12A1-205	ENST00000425443	TRAV17	A0A0B4J275	112 aa		10.9	□□□□□ -0.66
COL12A1-205	ENST00000425443	GGCT	O75223	188 aa	Known RBP	10.9	□□□□□ -0.66
COL12A1-205	ENST00000425443	HAND1	O96004	215 aa		10.9	□□□□□ -0.66
COL12A1-205	ENST00000425443	IGKV1D-33	P01593	117 aa		10.9	□□□□□ -0.66
COL12A1-205	ENST00000425443	IGKV1-33	P01594	117 aa		10.9	□□□□□ -0.66
COL12A1-205	ENST00000425443	ERVFC1-1	P60608	527 aa		10.9	□□□□□ -0.66
COL12A1-205	ENST00000425443	ZNF787	Q6DD87	383 aa		10.9	□□□□□ -0.66
COL12A1-205	ENST00000425443	ZNF497	Q6ZNH5	498 aa		10.9	□□□□□ -0.66
COL12A1-205	ENST00000425443	NINJ1	Q92982	152 aa		10.9	□□□□□ -0.66
COL12A1-205	ENST00000425443	SARAF	Q96BY9	339 aa		10.9	□□□□□ -0.66
COL12A1-205	ENST00000425443	RBMXL1	Q96E39	390 aa	Known RBP	10.9	□□□□□ -0.66
COL12A1-205	ENST00000425443	PCNX1	Q96RV3	2341 aa		10.9	□□□□□ -0.67
COL12A1-205	ENST00000425443		A0A1B0GU03	582 aa		10.89	□□□□□ -0.67
COL12A1-205	ENST00000425443	CEBPZOS	A8MTT3	80 aa		10.89	□□□□□ -0.67
COL12A1-205	ENST00000425443	RAMP3	O60896	148 aa		10.89	□□□□□ -0.67
COL12A1-205	ENST00000425443	PGA5	P0DJD9	388 aa		10.89	□□□□□ -0.67
COL12A1-205	ENST00000425443	GCH1	P30793	250 aa		10.89	□□□□□ -0.67
COL12A1-205	ENST00000425443	GABRA2	P47869	451 aa		10.89	□□□□□ -0.67
COL12A1-205	ENST00000425443	JOSD1	Q15040	202 aa	Predicted RBP	10.89	□□□□□ -0.67
COL12A1-205	ENST00000425443	OR4C5	Q8NGB2	326 aa		10.89	□□□□□ -0.67
COL12A1-205	ENST00000425443	CABLES2	Q9BTV7	478 aa		10.89	□□□□□ -0.67
COL12A1-205	ENST00000425443	LIN7C	Q9NUP9	197 aa	Known RBP	10.89	□□□□□ -0.67
COL12A1-205	ENST00000425443	CLCF1	Q9UBD9	225 aa		10.89	□□□□□ -0.67
COL12A1-205	ENST00000425443		K7EP13	123 aa		10.89	□□□□□ -0.67
COL12A1-205	ENST00000425443	G6PC	P35575	357 aa		10.89	□□□□□ -0.67
COL12A1-205	ENST00000425443	AES	Q08117	197 aa		10.89	□□□□□ -0.67
COL12A1-205	ENST00000425443	SNIP1	Q8TAD8	396 aa	Known RBP	10.89	□□□□□ -0.67
COL12A1-205	ENST00000425443	FAM234A	Q9H0X4	552 aa		10.89	□□□□□ -0.67
COL12A1-205	ENST00000425443	BCL2	P10415	239 aa		10.89	□□□□□ -0.67
COL12A1-205	ENST00000425443	OR1L1	Q8NH94	360 aa		10.89	□□□□□ -0.67
COL12A1-205	ENST00000425443	GALM	Q96C23	342 aa		10.89	□□□□□ -0.67
COL12A1-205	ENST00000425443	LOC105371242	A0A075B767	164 aa		10.88	□□□□□ -0.67
COL12A1-205	ENST00000425443	IQCF6	A8MYZ5	107 aa		10.88	□□□□□ -0.67
COL12A1-205	ENST00000425443	DFFB	O76075	338 aa		10.88	□□□□□ -0.67
COL12A1-205	ENST00000425443	IL6R	P08887	468 aa	Predicted RBP	10.88	□□□□□ -0.67
COL12A1-205	ENST00000425443	SELENOV	P59797	346 aa		10.88	□□□□□ -0.67
COL12A1-205	ENST00000425443	C9orf106	Q8NAJ2	232 aa		10.88	□□□□□ -0.67
COL12A1-205	ENST00000425443	RAB40C	Q96S21	281 aa		10.88	□□□□□ -0.67
COL12A1-205	ENST00000425443	OR2D2	Q9H210	308 aa		10.88	□□□□□ -0.67
COL12A1-205	ENST00000425443	RBKS	Q9H477	322 aa		10.88	□□□□□ -0.67
COL12A1-205	ENST00000425443	OTOGL	Q3ZCN5	2332 aa		10.88	□□□□□ -0.67
COL12A1-205	ENST00000425443	PLCE1	Q9P212	2302 aa		10.88	□□□□□ -0.67
COL12A1-205	ENST00000425443	PIEZO2	Q9H5I5	2752 aa		10.88	□□□□□ -0.67
COL12A1-205	ENST00000425443	PTPRZ1	P23471	2315 aa	Predicted RBP	10.88	□□□□□ -0.67
COL12A1-205	ENST00000425443	POLE	Q07864	2286 aa		10.88	□□□□□ -0.67
COL12A1-205	ENST00000425443	TRAV1-1	A0A0B4J248	108 aa		10.88	□□□□□ -0.67
COL12A1-205	ENST00000425443	TMEM30CP	A0ZSE6	113 aa		10.88	□□□□□ -0.67
COL12A1-205	ENST00000425443	PAX5	Q02548	391 aa		10.88	□□□□□ -0.67
COL12A1-205	ENST00000425443	PRAMEF6	Q5VXH4	476 aa		10.88	□□□□□ -0.67
COL12A1-205	ENST00000425443	DRAM1	Q8N682	238 aa		10.88	□□□□□ -0.67
COL12A1-205	ENST00000425443	OR52L2P	Q8NGH6	319 aa		10.88	□□□□□ -0.67
COL12A1-205	ENST00000425443	CISD1	Q9NZ45	108 aa	Known RBP	10.88	□□□□□ -0.67
COL12A1-205	ENST00000425443	CLN8	Q9UBY8	286 aa		10.88	□□□□□ -0.67
COL12A1-205	ENST00000425443	INTS1	Q8N201	2190 aa	Known RBP	10.88	□□□□□ -0.67
COL12A1-205	ENST00000425443		F6UZH7	168 aa		10.87	□□□□□ -0.67
COL12A1-205	ENST00000425443	PSPN	O60542	156 aa		10.87	□□□□□ -0.67
COL12A1-205	ENST00000425443	ERVK11-1	P61568	191 aa		10.87	□□□□□ -0.67
COL12A1-205	ENST00000425443	ZNF146	Q15072	292 aa		10.87	□□□□□ -0.67
COL12A1-205	ENST00000425443	DNLZ	Q5SXM8	178 aa		10.87	□□□□□ -0.67
COL12A1-205	ENST00000425443	WDR25	Q64LD2	544 aa	Predicted RBP	10.87	□□□□□ -0.67
COL12A1-205	ENST00000425443	GATAD1	Q8WUU5	269 aa		10.87	□□□□□ -0.67
COL12A1-205	ENST00000425443	SLC25A22	Q9H936	323 aa		10.87	□□□□□ -0.67
COL12A1-205	ENST00000425443	RNF212B	A8MTL3	300 aa		10.87	□□□□□ -0.67
COL12A1-205	ENST00000425443	IGHG3	P01860	377 aa		10.87	□□□□□ -0.67
COL12A1-205	ENST00000425443	NBEAP1	P0C6P0	100 aa		10.87	□□□□□ -0.67
COL12A1-205	ENST00000425443	KIR2DL2	P43627	348 aa	Predicted RBP	10.87	□□□□□ -0.67
COL12A1-205	ENST00000425443	PRSS57	Q6UWY2	283 aa		10.87	□□□□□ -0.67
COL12A1-205	ENST00000425443	FGFRL1	Q8N441	504 aa		10.87	□□□□□ -0.67
COL12A1-205	ENST00000425443	RPUSD4	Q96CM3	377 aa	Known RBP	10.87	□□□□□ -0.67
COL12A1-205	ENST00000425443	ZNF48	Q96MX3	618 aa	Predicted RBP	10.87	□□□□□ -0.67
COL12A1-205	ENST00000425443	OR4C12	Q96R67	309 aa		10.87	□□□□□ -0.67
COL12A1-205	ENST00000425443	SDF2L1	Q9HCN8	221 aa		10.87	□□□□□ -0.67
COL12A1-205	ENST00000425443	ADGRG4	Q8IZF6	3080 aa		10.87	□□□□□ -0.67
COL12A1-205	ENST00000425443	GALR2	O43603	387 aa	Predicted RBP	10.87	□□□□□ -0.67
COL12A1-205	ENST00000425443	HBE1	P02100	147 aa		10.87	□□□□□ -0.67
COL12A1-205	ENST00000425443	FOXF2	Q12947	444 aa		10.87	□□□□□ -0.67
COL12A1-205	ENST00000425443	EDDM3A	Q14507	147 aa		10.87	□□□□□ -0.67
COL12A1-205	ENST00000425443	ZNF718	Q3SXZ3	478 aa		10.87	□□□□□ -0.67
COL12A1-205	ENST00000425443	CXXC4	Q9H2H0	198 aa		10.87	□□□□□ -0.67
COL12A1-205	ENST00000425443	DUSP13	Q9UII6	198 aa		10.87	□□□□□ -0.67
COL12A1-205	ENST00000425443	ATM	Q13315	3056 aa		10.86	□□□□□ -0.67
COL12A1-205	ENST00000425443	PKDREJ	Q9NTG1	2253 aa		10.86	□□□□□ -0.67
COL12A1-205	ENST00000425443	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	10.86	□□□□□ -0.67
COL12A1-205	ENST00000425443	DPPA3	Q6W0C5	159 aa		10.86	□□□□□ -0.67
COL12A1-205	ENST00000425443	ZDHHC16	Q969W1	377 aa		10.86	□□□□□ -0.67
COL12A1-205	ENST00000425443	C5orf30	Q96GV9	206 aa		10.86	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 30 ms