RNA–Protein interactions for RNA: ENST00000423026.6

SNX20-203, Transcript of sorting nexin 20, humanhuman

TSL 1 (best) BASIC

Gene SNX20, Length 2,156 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-203ENST00000423026 ZNF616Q08AN1 781 aa7.5□□□□□ -1.21
SNX20-203ENST00000423026 HIST2H2BEQ16778 126 aa7.5□□□□□ -1.21
SNX20-203ENST00000423026 ZNF674Q2M3X9 581 aa7.5□□□□□ -1.21
SNX20-203ENST00000423026 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.5□□□□□ -1.21
SNX20-203ENST00000423026 ZNF788Q6ZQV5 615 aa7.5□□□□□ -1.21
SNX20-203ENST00000423026 FGFRL1Q8N441 504 aa7.5□□□□□ -1.21
SNX20-203ENST00000423026 ZCCHC14Q8WYQ9 949 aaKnown RBP7.5□□□□□ -1.21
SNX20-203ENST00000423026 HIST1H2BHQ93079 126 aa7.5□□□□□ -1.21
SNX20-203ENST00000423026 GAFA1Q96PS6 74 aa7.5□□□□□ -1.21
SNX20-203ENST00000423026 RAB40CQ96S21 281 aa7.5□□□□□ -1.21
SNX20-203ENST00000423026 CCL13Q99616 98 aa7.5□□□□□ -1.21
SNX20-203ENST00000423026 HIST1H2BNQ99877 126 aa7.5□□□□□ -1.21
SNX20-203ENST00000423026 HIST1H2BMQ99879 126 aa7.5□□□□□ -1.21
SNX20-203ENST00000423026 CALYQ9NYX4 217 aa7.5□□□□□ -1.21
SNX20-203ENST00000423026 CACNG5Q9UF02 275 aa7.5□□□□□ -1.21
SNX20-203ENST00000423026 LAMP3Q9UQV4 416 aa7.5□□□□□ -1.21
SNX20-203ENST00000423026 TANC2Q9HCD6 1990 aa7.5□□□□□ -1.21
SNX20-203ENST00000423026 E7EQL1 145 aa7.49□□□□□ -1.21
SNX20-203ENST00000423026 NXPH3O95157 252 aa7.49□□□□□ -1.21
SNX20-203ENST00000423026 IGKV1-5P01602 117 aa7.49□□□□□ -1.21
SNX20-203ENST00000423026 BAXQ07812 192 aa7.49□□□□□ -1.21
SNX20-203ENST00000423026 COTL1Q14019 142 aa7.49□□□□□ -1.21
SNX20-203ENST00000423026 ZNF266Q14584 549 aa7.49□□□□□ -1.21
SNX20-203ENST00000423026 KHDC3LQ587J8 217 aa7.49□□□□□ -1.21
SNX20-203ENST00000423026 FAM53AQ6NSI3 398 aaPredicted RBP7.49□□□□□ -1.21
SNX20-203ENST00000423026 TMEM252Q8N6L7 170 aa7.49□□□□□ -1.21
SNX20-203ENST00000423026 C11orf1Q9H5F2 150 aa7.49□□□□□ -1.21
SNX20-203ENST00000423026 MMP24Q9Y5R2 645 aa7.49□□□□□ -1.21
SNX20-203ENST00000423026 USF3Q68DE3 2245 aa7.49□□□□□ -1.21
SNX20-203ENST00000423026 DIDO1Q9BTC0 2240 aaKnown RBP7.49□□□□□ -1.21
SNX20-203ENST00000423026 RAI1Q7Z5J4 1906 aaPredicted RBP7.49□□□□□ -1.21
SNX20-203ENST00000423026 DSCAML1Q8TD84 2053 aa7.49□□□□□ -1.21
SNX20-203ENST00000423026 ROS1P08922 2347 aa7.49□□□□□ -1.21
SNX20-203ENST00000423026 PPIAL4EA0A075B759 164 aa7.49□□□□□ -1.21
SNX20-203ENST00000423026 KBTBD11-OT1A0A1B0GTJ5 212 aa7.49□□□□□ -1.21
SNX20-203ENST00000423026 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.49□□□□□ -1.21
SNX20-203ENST00000423026 B9A039 149 aa7.49□□□□□ -1.21
SNX20-203ENST00000423026 PPIAL4DF5H284 164 aa7.49□□□□□ -1.21
SNX20-203ENST00000423026 PPIAL4FP0DN26 164 aa7.49□□□□□ -1.21
SNX20-203ENST00000423026 RAB7AP51149 207 aa7.49□□□□□ -1.21
SNX20-203ENST00000423026 BPIFB3P59826 476 aa7.49□□□□□ -1.21
SNX20-203ENST00000423026 RPL30P62888 115 aaKnown RBP7.49□□□□□ -1.21
SNX20-203ENST00000423026 ZNF816Q0VGE8 651 aaPredicted RBP7.49□□□□□ -1.21
SNX20-203ENST00000423026 EIF4EBP1Q13541 118 aaPredicted RBP7.49□□□□□ -1.21
SNX20-203ENST00000423026 ELOBQ15370 118 aa7.49□□□□□ -1.21
SNX20-203ENST00000423026 BTNL3Q6UXE8 466 aa7.49□□□□□ -1.21
SNX20-203ENST00000423026 ZCCHC24Q8N2G6 241 aaKnown RBP7.49□□□□□ -1.21
SNX20-203ENST00000423026 LINC01560Q8TB33 94 aa7.49□□□□□ -1.21
SNX20-203ENST00000423026 DTD1Q8TEA8 209 aa7.49□□□□□ -1.21
SNX20-203ENST00000423026 R3HDM4Q96D70 268 aa7.49□□□□□ -1.21
SNX20-203ENST00000423026 AGMATQ9BSE5 352 aa7.49□□□□□ -1.21
SNX20-203ENST00000423026 CLN8Q9UBY8 286 aa7.49□□□□□ -1.21
SNX20-203ENST00000423026 GOLT1BQ9Y3E0 138 aa7.49□□□□□ -1.21
SNX20-203ENST00000423026 PPIAL4AQ9Y536 164 aa7.49□□□□□ -1.21
SNX20-203ENST00000423026 hADV38S2A0JD32 116 aa7.48□□□□□ -1.21
SNX20-203ENST00000423026 IGSF23A1L1A6 192 aa7.48□□□□□ -1.21
SNX20-203ENST00000423026 ITGB1BP1O14713 200 aa7.48□□□□□ -1.21
SNX20-203ENST00000423026 TMPRSS2O15393 492 aa7.48□□□□□ -1.21
SNX20-203ENST00000423026 SYNGR2O43760 224 aa7.48□□□□□ -1.21
SNX20-203ENST00000423026 CLDN14O95500 239 aa7.48□□□□□ -1.21
SNX20-203ENST00000423026 SOD3P08294 240 aa7.48□□□□□ -1.21
SNX20-203ENST00000423026 FGF7P21781 194 aa7.48□□□□□ -1.21
SNX20-203ENST00000423026 OMGP23515 440 aa7.48□□□□□ -1.21
SNX20-203ENST00000423026 LOXL3P58215 753 aa7.48□□□□□ -1.21
SNX20-203ENST00000423026 EFNB3Q15768 340 aa7.48□□□□□ -1.21
SNX20-203ENST00000423026 IZUMO4Q1ZYL8 232 aa7.48□□□□□ -1.21
SNX20-203ENST00000423026 TMEM30BQ3MIR4 351 aa7.48□□□□□ -1.21
SNX20-203ENST00000423026 AKR1C8PQ5T2L2 129 aa7.48□□□□□ -1.21
SNX20-203ENST00000423026 Q6ZRM9 215 aa7.48□□□□□ -1.21
SNX20-203ENST00000423026 FAM216BQ8N7L0 139 aa7.48□□□□□ -1.21
SNX20-203ENST00000423026 CCL17Q92583 94 aa7.48□□□□□ -1.21
SNX20-203ENST00000423026 BSCL2Q96G97 398 aaPredicted RBP7.48□□□□□ -1.21
SNX20-203ENST00000423026 GPR61Q9BZJ8 451 aa7.48□□□□□ -1.21
SNX20-203ENST00000423026 RNF115Q9Y4L5 304 aa7.48□□□□□ -1.21
SNX20-203ENST00000423026 PUS1Q9Y606 427 aaKnown RBP eCLIP7.48□□□□□ -1.21
SNX20-203ENST00000423026 SMCO3A2RU48 225 aa7.47□□□□□ -1.21
SNX20-203ENST00000423026 C17orf98A8MV24 154 aa7.47□□□□□ -1.21
SNX20-203ENST00000423026 FAM90A26D6RGX4 464 aa7.47□□□□□ -1.21
SNX20-203ENST00000423026 TMEM178BH3BS89 294 aa7.47□□□□□ -1.21
SNX20-203ENST00000423026 PHOX2AO14813 284 aa7.47□□□□□ -1.21
SNX20-203ENST00000423026 RAMP3O60896 148 aa7.47□□□□□ -1.21
SNX20-203ENST00000423026 KRASP01116 189 aa7.47□□□□□ -1.21
SNX20-203ENST00000423026 PRH1P02810 166 aa7.47□□□□□ -1.21
SNX20-203ENST00000423026 OR13C7P0DN81 318 aa7.47□□□□□ -1.21
SNX20-203ENST00000423026 CGB3P0DN86 165 aa7.47□□□□□ -1.21
SNX20-203ENST00000423026 CGB7P0DN87 165 aa7.47□□□□□ -1.21
SNX20-203ENST00000423026 ZNF25P17030 456 aaPredicted RBP7.47□□□□□ -1.21
SNX20-203ENST00000423026 TGIF2LYQ8IUE0 185 aa7.47□□□□□ -1.21
SNX20-203ENST00000423026 RNASEH2CQ8TDP1 164 aaKnown RBP7.47□□□□□ -1.21
SNX20-203ENST00000423026 Q8WTZ3 238 aa7.47□□□□□ -1.21
SNX20-203ENST00000423026 C5orf30Q96GV9 206 aa7.47□□□□□ -1.21
SNX20-203ENST00000423026 ATG101Q9BSB4 218 aa7.47□□□□□ -1.21
SNX20-203ENST00000423026 PRORYQ9H606 182 aa7.47□□□□□ -1.21
SNX20-203ENST00000423026 WFDC1Q9HC57 220 aa7.47□□□□□ -1.21
SNX20-203ENST00000423026 TMEM106BQ9NUM4 274 aa7.47□□□□□ -1.21
SNX20-203ENST00000423026 CISD1Q9NZ45 108 aaKnown RBP7.47□□□□□ -1.21
SNX20-203ENST00000423026 FBXO7Q9Y3I1 522 aa7.47□□□□□ -1.21
SNX20-203ENST00000423026 WSB1Q9Y6I7 421 aa7.47□□□□□ -1.21
SNX20-203ENST00000423026 KMT2BQ9UMN6 2715 aaPredicted RBP7.47□□□□□ -1.21
SNX20-203ENST00000423026 H3BQ15 152 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms