RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 M0R1W7 72 aa7.27□□□□□ -1.25
HPS4-204ENST00000422379 GPR137BO60478 399 aa7.27□□□□□ -1.25
HPS4-204ENST00000422379 FOXH1O75593 365 aa7.27□□□□□ -1.25
HPS4-204ENST00000422379 NXPH3O95157 252 aa7.27□□□□□ -1.25
HPS4-204ENST00000422379 AVPP01185 164 aa7.27□□□□□ -1.25
HPS4-204ENST00000422379 RBP4P02753 201 aa7.27□□□□□ -1.25
HPS4-204ENST00000422379 DVL1P1P54792 670 aaPredicted RBP7.27□□□□□ -1.25
HPS4-204ENST00000422379 LOXL1Q08397 574 aaPredicted RBP7.27□□□□□ -1.25
HPS4-204ENST00000422379 Q3ZCU0 254 aa7.27□□□□□ -1.25
HPS4-204ENST00000422379 ZNF585BQ52M93 769 aa7.27□□□□□ -1.25
HPS4-204ENST00000422379 VMO1Q7Z5L0 202 aa7.27□□□□□ -1.25
HPS4-204ENST00000422379 ZNF596Q8TC21 504 aa7.27□□□□□ -1.25
HPS4-204ENST00000422379 FAM216AQ8WUB2 273 aa7.27□□□□□ -1.25
HPS4-204ENST00000422379 ST6GALNAC6Q969X2 333 aa7.27□□□□□ -1.25
HPS4-204ENST00000422379 GPR146Q96CH1 333 aa7.27□□□□□ -1.25
HPS4-204ENST00000422379 MAGT1Q9H0U3 335 aa7.27□□□□□ -1.25
HPS4-204ENST00000422379 A0A1W2PRD5 423 aa7.27□□□□□ -1.25
HPS4-204ENST00000422379 A0A1W2PRF3 423 aa7.27□□□□□ -1.25
HPS4-204ENST00000422379 A0A1W2PRM7 423 aa7.27□□□□□ -1.25
HPS4-204ENST00000422379 RNF212BA8MTL3 300 aa7.27□□□□□ -1.25
HPS4-204ENST00000422379 ITGB1BP1O14713 200 aa7.27□□□□□ -1.25
HPS4-204ENST00000422379 FGF16O43320 207 aa7.27□□□□□ -1.25
HPS4-204ENST00000422379 SSSCA1O60232 199 aa7.27□□□□□ -1.25
HPS4-204ENST00000422379 IGKV1-5P01602 117 aa7.27□□□□□ -1.25
HPS4-204ENST00000422379 GAPDHP04406 335 aaKnown RBP7.27□□□□□ -1.25
HPS4-204ENST00000422379 MSMBP08118 114 aa7.27□□□□□ -1.25
HPS4-204ENST00000422379 IGHV4-31P0DP07 118 aa7.27□□□□□ -1.25
HPS4-204ENST00000422379 HOXB4P17483 251 aaPredicted RBP7.27□□□□□ -1.25
HPS4-204ENST00000422379 EPHA1P21709 976 aa7.27□□□□□ -1.25
HPS4-204ENST00000422379 PRTN3P24158 256 aa7.27□□□□□ -1.25
HPS4-204ENST00000422379 ID3Q02535 119 aa7.27□□□□□ -1.25
HPS4-204ENST00000422379 PAX8Q06710 450 aa7.27□□□□□ -1.25
HPS4-204ENST00000422379 IZUMO4Q1ZYL8 232 aa7.27□□□□□ -1.25
HPS4-204ENST00000422379 TMEM30BQ3MIR4 351 aa7.27□□□□□ -1.25
HPS4-204ENST00000422379 FBLN7Q53RD9 439 aa7.27□□□□□ -1.25
HPS4-204ENST00000422379 GPR157Q5UAW9 335 aa7.27□□□□□ -1.25
HPS4-204ENST00000422379 NCR3LG1Q68D85 454 aa7.27□□□□□ -1.25
HPS4-204ENST00000422379 HSD17B13Q7Z5P4 300 aaPredicted RBP7.27□□□□□ -1.25
HPS4-204ENST00000422379 LYG1Q8N1E2 194 aa7.27□□□□□ -1.25
HPS4-204ENST00000422379 KIR3DL3Q8N743 410 aa7.27□□□□□ -1.25
HPS4-204ENST00000422379 ZBTB34Q8NCN2 500 aa7.27□□□□□ -1.25
HPS4-204ENST00000422379 OR4P4Q8NGL7 312 aa7.27□□□□□ -1.25
HPS4-204ENST00000422379 EDARADDQ8WWZ3 215 aa7.27□□□□□ -1.25
HPS4-204ENST00000422379 AJUBAQ96IF1 538 aa7.27□□□□□ -1.25
HPS4-204ENST00000422379 FOXC2Q99958 501 aa7.27□□□□□ -1.25
HPS4-204ENST00000422379 PCGF1Q9BSM1 259 aa7.27□□□□□ -1.25
HPS4-204ENST00000422379 UNKLQ9H9P5 680 aaKnown RBP7.27□□□□□ -1.25
HPS4-204ENST00000422379 A0A1B0GU03 582 aa7.26□□□□□ -1.25
HPS4-204ENST00000422379 CYSRT1A8MQ03 144 aa7.26□□□□□ -1.25
HPS4-204ENST00000422379 RAMP3O60896 148 aa7.26□□□□□ -1.25
HPS4-204ENST00000422379 PITX3O75364 302 aa7.26□□□□□ -1.25
HPS4-204ENST00000422379 FGF2P09038 288 aa7.26□□□□□ -1.25
HPS4-204ENST00000422379 FAM157CP0CG43 387 aa7.26□□□□□ -1.25
HPS4-204ENST00000422379 M6PRP20645 277 aa7.26□□□□□ -1.25
HPS4-204ENST00000422379 REG1BP48304 166 aa7.26□□□□□ -1.25
HPS4-204ENST00000422379 AKR1C2P52895 323 aa7.26□□□□□ -1.25
HPS4-204ENST00000422379 EIF5AP63241 154 aaKnown RBP7.26□□□□□ -1.25
HPS4-204ENST00000422379 EWSR1Q01844 656 aaKnown RBP eCLIP7.26□□□□□ -1.25
HPS4-204ENST00000422379 NHLH2Q02577 135 aa7.26□□□□□ -1.25
HPS4-204ENST00000422379 MSMO1Q15800 293 aa7.26□□□□□ -1.25
HPS4-204ENST00000422379 TMEM249Q2WGJ8 235 aa7.26□□□□□ -1.25
HPS4-204ENST00000422379 OR2B11Q5JQS5 317 aa7.26□□□□□ -1.25
HPS4-204ENST00000422379 Q6ZRM9 215 aa7.26□□□□□ -1.25
HPS4-204ENST00000422379 OR2C3Q8N628 320 aa7.26□□□□□ -1.25
HPS4-204ENST00000422379 RNASE11Q8TAA1 199 aaKnown RBP7.26□□□□□ -1.25
HPS4-204ENST00000422379 WFDC1Q9HC57 220 aa7.26□□□□□ -1.25
HPS4-204ENST00000422379 SOX21Q9Y651 276 aaPredicted RBP7.26□□□□□ -1.25
HPS4-204ENST00000422379 KPTNQ9Y664 436 aa7.26□□□□□ -1.25
HPS4-204ENST00000422379 MTORP42345 2549 aa7.26□□□□□ -1.25
HPS4-204ENST00000422379 IGSF23A1L1A6 192 aa7.25□□□□□ -1.25
HPS4-204ENST00000422379 FAM24AA6NFZ4 105 aa7.25□□□□□ -1.25
HPS4-204ENST00000422379 ODF3BA8MYP8 253 aa7.25□□□□□ -1.25
HPS4-204ENST00000422379 LY6LH3BQJ8 138 aa7.25□□□□□ -1.25
HPS4-204ENST00000422379 M0R1X1 148 aa7.25□□□□□ -1.25
HPS4-204ENST00000422379 SHOXO15266 292 aa7.25□□□□□ -1.25
HPS4-204ENST00000422379 JTBO76095 146 aa7.25□□□□□ -1.25
HPS4-204ENST00000422379 TOX4O94842 621 aa7.25□□□□□ -1.25
HPS4-204ENST00000422379 TMEM50AO95807 157 aa7.25□□□□□ -1.25
HPS4-204ENST00000422379 SLC25A6P12236 298 aa7.25□□□□□ -1.25
HPS4-204ENST00000422379 PVALBP20472 110 aaPredicted RBP7.25□□□□□ -1.25
HPS4-204ENST00000422379 DUTP33316 252 aaKnown RBP7.25□□□□□ -1.25
HPS4-204ENST00000422379 GPR12P47775 334 aa7.25□□□□□ -1.25
HPS4-204ENST00000422379 CAV2P51636 162 aa7.25□□□□□ -1.25
HPS4-204ENST00000422379 C1orf122Q6ZSJ8 110 aa7.25□□□□□ -1.25
HPS4-204ENST00000422379 ZNF833PQ6ZTB9 187 aa7.25□□□□□ -1.25
HPS4-204ENST00000422379 LHFPL4Q7Z7J7 247 aa7.25□□□□□ -1.25
HPS4-204ENST00000422379 DYNAPQ8N1N2 210 aa7.25□□□□□ -1.25
HPS4-204ENST00000422379 EIF4E3Q8N5X7 224 aaKnown RBP7.25□□□□□ -1.25
HPS4-204ENST00000422379 LINC00311Q8N616 119 aa7.25□□□□□ -1.25
HPS4-204ENST00000422379 C8orf31Q8N9H6 132 aa7.25□□□□□ -1.25
HPS4-204ENST00000422379 ZNF383Q8NA42 475 aa7.25□□□□□ -1.25
HPS4-204ENST00000422379 UBAC2Q8NBM4 344 aa7.25□□□□□ -1.25
HPS4-204ENST00000422379 OR11H6Q8NGC7 330 aa7.25□□□□□ -1.25
HPS4-204ENST00000422379 OR1S2Q8NGQ3 325 aa7.25□□□□□ -1.25
HPS4-204ENST00000422379 OR9G1Q8NH87 305 aa7.25□□□□□ -1.25
HPS4-204ENST00000422379 RNF141Q8WVD5 230 aa7.25□□□□□ -1.25
HPS4-204ENST00000422379 LSM10Q969L4 123 aaKnown RBP7.25□□□□□ -1.25
HPS4-204ENST00000422379 CLEC7AQ9BXN2 247 aa7.25□□□□□ -1.25
HPS4-204ENST00000422379 MRPL20Q9BYC9 149 aaKnown RBP7.25□□□□□ -1.25
HPS4-204ENST00000422379 HIF1ANQ9NWT6 349 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms