RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 DLX1P56177 255 aa11.5□□□□□ -0.57
SHMT1P1-201ENST00000419974 ID3Q02535 119 aa11.5□□□□□ -0.57
SHMT1P1-201ENST00000419974 KLRD1Q13241 179 aa11.5□□□□□ -0.57
SHMT1P1-201ENST00000419974 SMCO1Q147U7 214 aa11.5□□□□□ -0.57
SHMT1P1-201ENST00000419974 AANATQ16613 207 aa11.5□□□□□ -0.57
SHMT1P1-201ENST00000419974 CIARTQ8N365 385 aaPredicted RBP11.5□□□□□ -0.57
SHMT1P1-201ENST00000419974 ZBTB8BQ8NAP8 495 aaPredicted RBP11.5□□□□□ -0.57
SHMT1P1-201ENST00000419974 OR2T35Q8NGX2 323 aa11.5□□□□□ -0.57
SHMT1P1-201ENST00000419974 OR4A5Q8NH83 315 aa11.5□□□□□ -0.57
SHMT1P1-201ENST00000419974 GPR146Q96CH1 333 aa11.5□□□□□ -0.57
SHMT1P1-201ENST00000419974 FLYWCH2Q96CP2 140 aaKnown RBP11.5□□□□□ -0.57
SHMT1P1-201ENST00000419974 HYLS1Q96M11 299 aa11.5□□□□□ -0.57
SHMT1P1-201ENST00000419974 PDCD10Q9BUL8 212 aa11.5□□□□□ -0.57
SHMT1P1-201ENST00000419974 MEGF9Q9H1U4 602 aa11.5□□□□□ -0.57
SHMT1P1-201ENST00000419974 YLPM1P49750 1951 aaKnown RBP11.5□□□□□ -0.57
SHMT1P1-201ENST00000419974 HMSDA8MTL9 139 aa11.49□□□□□ -0.57
SHMT1P1-201ENST00000419974 CCSO14618 274 aa11.49□□□□□ -0.57
SHMT1P1-201ENST00000419974 SIX6O95475 246 aa11.49□□□□□ -0.57
SHMT1P1-201ENST00000419974 TGFAP01135 160 aa11.49□□□□□ -0.57
SHMT1P1-201ENST00000419974 PET100P0DJ07 73 aa11.49□□□□□ -0.57
SHMT1P1-201ENST00000419974 PSMB6P28072 239 aa11.49□□□□□ -0.57
SHMT1P1-201ENST00000419974 CD300CQ08708 224 aa11.49□□□□□ -0.57
SHMT1P1-201ENST00000419974 GPR157Q5UAW9 335 aa11.49□□□□□ -0.57
SHMT1P1-201ENST00000419974 TMEM65Q6PI78 240 aa11.49□□□□□ -0.57
SHMT1P1-201ENST00000419974 C9orf139Q6ZV77 190 aa11.49□□□□□ -0.57
SHMT1P1-201ENST00000419974 ZNF429Q86V71 674 aa11.49□□□□□ -0.57
SHMT1P1-201ENST00000419974 FOXRED2Q8IWF2 684 aa11.49□□□□□ -0.57
SHMT1P1-201ENST00000419974 OR52E5Q8NH55 327 aa11.49□□□□□ -0.57
SHMT1P1-201ENST00000419974 VSTM2AQ8TAG5 236 aa11.49□□□□□ -0.57
SHMT1P1-201ENST00000419974 PPP1R1CQ8WVI7 109 aa11.49□□□□□ -0.57
SHMT1P1-201ENST00000419974 R3HDM4Q96D70 268 aa11.49□□□□□ -0.57
SHMT1P1-201ENST00000419974 RHOVQ96L33 236 aa11.49□□□□□ -0.57
SHMT1P1-201ENST00000419974 BET1LQ9NYM9 111 aa11.49□□□□□ -0.57
SHMT1P1-201ENST00000419974 ZANQ9Y493 2812 aa11.48□□□□□ -0.57
SHMT1P1-201ENST00000419974 C13orf42A0A1B0GVH6 325 aa11.48□□□□□ -0.57
SHMT1P1-201ENST00000419974 A8MV72 311 aaPredicted RBP11.48□□□□□ -0.57
SHMT1P1-201ENST00000419974 SPDEFO95238 335 aa11.48□□□□□ -0.57
SHMT1P1-201ENST00000419974 LY86O95711 162 aa11.48□□□□□ -0.57
SHMT1P1-201ENST00000419974 CRYZL1O95825 349 aa11.48□□□□□ -0.57
SHMT1P1-201ENST00000419974 LY6G6DO95868 133 aa11.48□□□□□ -0.57
SHMT1P1-201ENST00000419974 KRASP01116 189 aa11.48□□□□□ -0.57
SHMT1P1-201ENST00000419974 AKR1C2P52895 323 aa11.48□□□□□ -0.57
SHMT1P1-201ENST00000419974 ERVK-16P61578 105 aa11.48□□□□□ -0.57
SHMT1P1-201ENST00000419974 THOC7Q6I9Y2 204 aaKnown RBP11.48□□□□□ -0.57
SHMT1P1-201ENST00000419974 PUSL1Q8N0Z8 303 aaKnown RBP11.48□□□□□ -0.57
SHMT1P1-201ENST00000419974 PIP4P2Q8N4L2 257 aa11.48□□□□□ -0.57
SHMT1P1-201ENST00000419974 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.48□□□□□ -0.57
SHMT1P1-201ENST00000419974 CSPG4Q6UVK1 2322 aa11.47□□□□□ -0.57
SHMT1P1-201ENST00000419974 A0A0G2JRQ6 117 aa11.47□□□□□ -0.57
SHMT1P1-201ENST00000419974 MPC2O95563 127 aa11.47□□□□□ -0.57
SHMT1P1-201ENST00000419974 SAA4P35542 130 aa11.47□□□□□ -0.57
SHMT1P1-201ENST00000419974 G6PCP35575 357 aa11.47□□□□□ -0.57
SHMT1P1-201ENST00000419974 REG1BP48304 166 aa11.47□□□□□ -0.57
SHMT1P1-201ENST00000419974 UBE2KP61086 200 aa11.47□□□□□ -0.57
SHMT1P1-201ENST00000419974 ZFP69Q49AA0 526 aa11.47□□□□□ -0.57
SHMT1P1-201ENST00000419974 OR2B11Q5JQS5 317 aa11.47□□□□□ -0.57
SHMT1P1-201ENST00000419974 KLF17Q5JT82 389 aaPredicted RBP11.47□□□□□ -0.57
SHMT1P1-201ENST00000419974 Q6ZRM9 215 aa11.47□□□□□ -0.57
SHMT1P1-201ENST00000419974 H2BFWTQ7Z2G1 175 aa11.47□□□□□ -0.57
SHMT1P1-201ENST00000419974 LHFPL4Q7Z7J7 247 aa11.47□□□□□ -0.57
SHMT1P1-201ENST00000419974 NOXA1Q86UR1 476 aa11.47□□□□□ -0.57
SHMT1P1-201ENST00000419974 TEX45Q8NA69 505 aa11.47□□□□□ -0.57
SHMT1P1-201ENST00000419974 OR8H1Q8NGG4 311 aa11.47□□□□□ -0.57
SHMT1P1-201ENST00000419974 CHIAQ9BZP6 476 aa11.47□□□□□ -0.57
SHMT1P1-201ENST00000419974 MS4A7Q9GZW8 240 aaPredicted RBP11.47□□□□□ -0.57
SHMT1P1-201ENST00000419974 POMT1Q9Y6A1 747 aa11.47□□□□□ -0.57
SHMT1P1-201ENST00000419974 TLN2Q9Y4G6 2542 aa11.47□□□□□ -0.57
SHMT1P1-201ENST00000419974 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.47□□□□□ -0.57
SHMT1P1-201ENST00000419974 ARHGAP32A7KAX9 2087 aa11.46□□□□□ -0.57
SHMT1P1-201ENST00000419974 TRAV14DV4A0A0A6YYC5 116 aa11.46□□□□□ -0.57
SHMT1P1-201ENST00000419974 SRRM4A7MD48 611 aaKnown RBP11.46□□□□□ -0.57
SHMT1P1-201ENST00000419974 FAM25EA8MYX2 175 aa11.46□□□□□ -0.57
SHMT1P1-201ENST00000419974 TIMM23O14925 209 aa11.46□□□□□ -0.57
SHMT1P1-201ENST00000419974 ST8SIA3O43173 380 aa11.46□□□□□ -0.57
SHMT1P1-201ENST00000419974 VENTXO95231 258 aa11.46□□□□□ -0.57
SHMT1P1-201ENST00000419974 AVPP01185 164 aa11.46□□□□□ -0.57
SHMT1P1-201ENST00000419974 IGLV2-23P01705 113 aa11.46□□□□□ -0.57
SHMT1P1-201ENST00000419974 HNRNPCP07910 306 aaKnown RBP eCLIP11.46□□□□□ -0.57
SHMT1P1-201ENST00000419974 TUSC1Q2TAM9 212 aa11.46□□□□□ -0.57
SHMT1P1-201ENST00000419974 C11orf87Q6NUJ2 197 aa11.46□□□□□ -0.57
SHMT1P1-201ENST00000419974 PRSS54Q6PEW0 395 aa11.46□□□□□ -0.57
SHMT1P1-201ENST00000419974 Q8N6K4 173 aa11.46□□□□□ -0.57
SHMT1P1-201ENST00000419974 NPBQ8NG41 125 aa11.46□□□□□ -0.57
SHMT1P1-201ENST00000419974 TSNAXQ99598 290 aaKnown RBP11.46□□□□□ -0.57
SHMT1P1-201ENST00000419974 TMEM14BQ9NUH8 114 aa11.46□□□□□ -0.57
SHMT1P1-201ENST00000419974 TMEM140Q9NV12 185 aa11.46□□□□□ -0.57
SHMT1P1-201ENST00000419974 HSPB7Q9UBY9 170 aa11.46□□□□□ -0.57
SHMT1P1-201ENST00000419974 ZNF257Q9Y2Q1 563 aa11.46□□□□□ -0.57
SHMT1P1-201ENST00000419974 HIVEP2P31629 2446 aa11.46□□□□□ -0.57
SHMT1P1-201ENST00000419974 H7C2Y5 167 aa11.45□□□□□ -0.58
SHMT1P1-201ENST00000419974 SHOXO15266 292 aa11.45□□□□□ -0.58
SHMT1P1-201ENST00000419974 DEDDO75618 318 aa11.45□□□□□ -0.58
SHMT1P1-201ENST00000419974 MBPP02686 304 aaPredicted RBP11.45□□□□□ -0.58
SHMT1P1-201ENST00000419974 CRYGBP07316 175 aa11.45□□□□□ -0.58
SHMT1P1-201ENST00000419974 BRS3P32247 399 aa11.45□□□□□ -0.58
SHMT1P1-201ENST00000419974 NKX2-1P43699 371 aaPredicted RBP11.45□□□□□ -0.58
SHMT1P1-201ENST00000419974 RELBQ01201 579 aa11.45□□□□□ -0.58
SHMT1P1-201ENST00000419974 PRB3Q04118 309 aaPredicted RBP11.45□□□□□ -0.58
SHMT1P1-201ENST00000419974 SSX2Q16385 188 aa11.45□□□□□ -0.58
SHMT1P1-201ENST00000419974 MOB3BQ86TA1 216 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms