RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 PLPPR1Q8TBJ4 325 aa11.93□□□□□ -0.5
SGCE-202ENST00000415788 FAAP24Q9BTP7 215 aa11.93□□□□□ -0.5
SGCE-202ENST00000415788 ANXA10Q9UJ72 324 aa11.93□□□□□ -0.5
SGCE-202ENST00000415788 LINC00312Q9Y6C7 94 aa11.93□□□□□ -0.5
SGCE-202ENST00000415788 ST8SIA3O43173 380 aa11.93□□□□□ -0.5
SGCE-202ENST00000415788 OR13C7P0DN81 318 aa11.93□□□□□ -0.5
SGCE-202ENST00000415788 GLIPR1P48060 266 aa11.93□□□□□ -0.5
SGCE-202ENST00000415788 PIGPP57054 158 aa11.93□□□□□ -0.5
SGCE-202ENST00000415788 ZNF266Q14584 549 aa11.93□□□□□ -0.5
SGCE-202ENST00000415788 FAM185AQ8N0U4 392 aa11.93□□□□□ -0.5
SGCE-202ENST00000415788 MAFIPQ8WZ33 124 aa11.93□□□□□ -0.5
SGCE-202ENST00000415788 NECAP2Q9NVZ3 263 aa11.93□□□□□ -0.5
SGCE-202ENST00000415788 HIF1ANQ9NWT6 349 aa11.93□□□□□ -0.5
SGCE-202ENST00000415788 UBE2J1Q9Y385 318 aaPredicted RBP11.93□□□□□ -0.5
SGCE-202ENST00000415788 CREBBPQ92793 2442 aa11.93□□□□□ -0.5
SGCE-202ENST00000415788 MALRD1Q5VYJ5 2156 aa11.93□□□□□ -0.5
SGCE-202ENST00000415788 TRGV10A0A0A0MS01 117 aa11.92□□□□□ -0.5
SGCE-202ENST00000415788 TGOLN2O43493 480 aa11.92□□□□□ -0.5
SGCE-202ENST00000415788 CD5LO43866 347 aa11.92□□□□□ -0.5
SGCE-202ENST00000415788 DTYMKP23919 212 aa11.92□□□□□ -0.5
SGCE-202ENST00000415788 ABCA11PQ4W5N1 156 aa11.92□□□□□ -0.5
SGCE-202ENST00000415788 PYY3Q5JQD4 70 aa11.92□□□□□ -0.5
SGCE-202ENST00000415788 TMEM200BQ69YZ2 307 aa11.92□□□□□ -0.5
SGCE-202ENST00000415788 LIAT1Q6ZQX7 453 aa11.92□□□□□ -0.5
SGCE-202ENST00000415788 LGI3Q8N145 548 aa11.92□□□□□ -0.5
SGCE-202ENST00000415788 TPRX1Q8N7U7 411 aa11.92□□□□□ -0.5
SGCE-202ENST00000415788 CORO2AQ92828 525 aa11.92□□□□□ -0.5
SGCE-202ENST00000415788 GFOD1Q9NXC2 390 aa11.92□□□□□ -0.5
SGCE-202ENST00000415788 AK3Q9UIJ7 227 aa11.92□□□□□ -0.5
SGCE-202ENST00000415788 INSIG2Q9Y5U4 225 aa11.92□□□□□ -0.5
SGCE-202ENST00000415788 PUS1Q9Y606 427 aaKnown RBP eCLIP11.92□□□□□ -0.5
SGCE-202ENST00000415788 RBFOX3A6NFN3 312 aa11.91□□□□□ -0.5
SGCE-202ENST00000415788 J3QLI3 93 aa11.91□□□□□ -0.5
SGCE-202ENST00000415788 IFNA10P01566 189 aa11.91□□□□□ -0.5
SGCE-202ENST00000415788 ZNF728P0DKX0 622 aa11.91□□□□□ -0.5
SGCE-202ENST00000415788 OR5H8P0DN80 308 aa11.91□□□□□ -0.5
SGCE-202ENST00000415788 ZNF16P17020 682 aaPredicted RBP11.91□□□□□ -0.5
SGCE-202ENST00000415788 GPX4P36969 197 aaPredicted RBP11.91□□□□□ -0.5
SGCE-202ENST00000415788 TRAT1Q6PIZ9 186 aa11.91□□□□□ -0.5
SGCE-202ENST00000415788 KIR3DL3Q8N743 410 aa11.91□□□□□ -0.5
SGCE-202ENST00000415788 FAM213BQ8TBF2 198 aa11.91□□□□□ -0.5
SGCE-202ENST00000415788 BSCL2Q96G97 398 aaPredicted RBP11.91□□□□□ -0.5
SGCE-202ENST00000415788 KIAA1456Q9P272 454 aa11.91□□□□□ -0.5
SGCE-202ENST00000415788 TRBV6-6A0A0A6YYG2 114 aa11.91□□□□□ -0.5
SGCE-202ENST00000415788 M0R1W7 72 aa11.91□□□□□ -0.5
SGCE-202ENST00000415788 YIF1AO95070 293 aa11.91□□□□□ -0.5
SGCE-202ENST00000415788 NAPSAO96009 420 aa11.91□□□□□ -0.5
SGCE-202ENST00000415788 GZMHP20718 246 aa11.91□□□□□ -0.5
SGCE-202ENST00000415788 NDUFA6P56556 154 aa11.91□□□□□ -0.5
SGCE-202ENST00000415788 GNMTQ14749 295 aa11.91□□□□□ -0.5
SGCE-202ENST00000415788 CR1LQ2VPA4 569 aa11.91□□□□□ -0.5
SGCE-202ENST00000415788 C1orf122Q6ZSJ8 110 aa11.91□□□□□ -0.5
SGCE-202ENST00000415788 MOB1BQ7L9L4 216 aa11.91□□□□□ -0.5
SGCE-202ENST00000415788 ZNF714Q96N38 554 aa11.91□□□□□ -0.5
SGCE-202ENST00000415788 GAL3ST2Q9H3Q3 398 aa11.91□□□□□ -0.5
SGCE-202ENST00000415788 DOK5Q9P104 306 aa11.91□□□□□ -0.5
SGCE-202ENST00000415788 TRAPPC2LQ9UL33 140 aa11.91□□□□□ -0.5
SGCE-202ENST00000415788 CR1P17927 2039 aa11.9□□□□□ -0.5
SGCE-202ENST00000415788 IGKV1D-8A0A087WSZ0 117 aa11.9□□□□□ -0.5
SGCE-202ENST00000415788 RBP4P02753 201 aa11.9□□□□□ -0.5
SGCE-202ENST00000415788 OR5AC1P0C628 307 aa11.9□□□□□ -0.5
SGCE-202ENST00000415788 HIST1H1BP16401 226 aaKnown RBP11.9□□□□□ -0.5
SGCE-202ENST00000415788 PPP1CCP36873 323 aaKnown RBP11.9□□□□□ -0.5
SGCE-202ENST00000415788 FHITP49789 147 aa11.9□□□□□ -0.5
SGCE-202ENST00000415788 UCP3P55916 312 aa11.9□□□□□ -0.5
SGCE-202ENST00000415788 PAX8Q06710 450 aa11.9□□□□□ -0.5
SGCE-202ENST00000415788 TMEM182Q6ZP80 229 aaPredicted RBP11.9□□□□□ -0.5
SGCE-202ENST00000415788 CCDC71LQ8N9Z2 235 aa11.9□□□□□ -0.5
SGCE-202ENST00000415788 ZNF383Q8NA42 475 aa11.9□□□□□ -0.5
SGCE-202ENST00000415788 RTN4IP1Q8WWV3 396 aaPredicted RBP11.9□□□□□ -0.5
SGCE-202ENST00000415788 DYRK2Q92630 601 aa11.9□□□□□ -0.5
SGCE-202ENST00000415788 RAB9BQ9NP90 201 aa11.9□□□□□ -0.5
SGCE-202ENST00000415788 MBNL3Q9NUK0 354 aaKnown RBP11.9□□□□□ -0.5
SGCE-202ENST00000415788 KCNS2Q9ULS6 477 aa11.9□□□□□ -0.5
SGCE-202ENST00000415788 IFITM10A6NMD0 228 aa11.89□□□□□ -0.51
SGCE-202ENST00000415788 B4DEV8 164 aa11.89□□□□□ -0.51
SGCE-202ENST00000415788 H3BQ15 152 aa11.89□□□□□ -0.51
SGCE-202ENST00000415788 HSPA12AO43301 675 aa11.89□□□□□ -0.51
SGCE-202ENST00000415788 HSPB1P04792 205 aaKnown RBP11.89□□□□□ -0.51
SGCE-202ENST00000415788 TAGLN2P37802 199 aaKnown RBP11.89□□□□□ -0.51
SGCE-202ENST00000415788 UBE2KP61086 200 aa11.89□□□□□ -0.51
SGCE-202ENST00000415788 SRPXP78539 464 aa11.89□□□□□ -0.51
SGCE-202ENST00000415788 KRTAP1-1Q07627 177 aa11.89□□□□□ -0.51
SGCE-202ENST00000415788 ZNF674Q2M3X9 581 aa11.89□□□□□ -0.51
SGCE-202ENST00000415788 C9orf152Q5JTZ5 239 aa11.89□□□□□ -0.51
SGCE-202ENST00000415788 TCF23Q7RTU1 214 aa11.89□□□□□ -0.51
SGCE-202ENST00000415788 HSD17B11Q8NBQ5 300 aa11.89□□□□□ -0.51
SGCE-202ENST00000415788 MRPL30Q8TCC3 161 aaKnown RBP11.89□□□□□ -0.51
SGCE-202ENST00000415788 ABHD14BQ96IU4 210 aa11.89□□□□□ -0.51
SGCE-202ENST00000415788 SH3BGRL3Q9H299 93 aa11.89□□□□□ -0.51
SGCE-202ENST00000415788 HIPK2Q9H2X6 1198 aa11.89□□□□□ -0.51
SGCE-202ENST00000415788 ONECUT1Q9UBC0 465 aa11.89□□□□□ -0.51
SGCE-202ENST00000415788 RCL1Q9Y2P8 373 aaKnown RBP11.89□□□□□ -0.51
SGCE-202ENST00000415788 SETXQ7Z333 2677 aaKnown RBP11.89□□□□□ -0.51
SGCE-202ENST00000415788 PITX3O75364 302 aa11.89□□□□□ -0.51
SGCE-202ENST00000415788 NDUFS6O75380 124 aaKnown RBP11.89□□□□□ -0.51
SGCE-202ENST00000415788 SRP19P09132 144 aaKnown RBP11.89□□□□□ -0.51
SGCE-202ENST00000415788 EWSR1Q01844 656 aaKnown RBP eCLIP11.89□□□□□ -0.51
SGCE-202ENST00000415788 ELOBQ15370 118 aa11.89□□□□□ -0.51
SGCE-202ENST00000415788 CLEC9AQ6UXN8 241 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms