RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 CREBBPQ92793 2442 aa12.75□□□□□ -0.37
SHMT2-202ENST00000414700 KBTBD11-OT1A0A1B0GTJ5 212 aa12.75□□□□□ -0.37
SHMT2-202ENST00000414700 NDUFS8O00217 210 aa12.75□□□□□ -0.37
SHMT2-202ENST00000414700 RPS10P46783 165 aaKnown RBP12.75□□□□□ -0.37
SHMT2-202ENST00000414700 RAB4BP61018 213 aa12.75□□□□□ -0.37
SHMT2-202ENST00000414700 OR10J5Q8NHC4 309 aa12.75□□□□□ -0.37
SHMT2-202ENST00000414700 CORO2AQ92828 525 aa12.75□□□□□ -0.37
SHMT2-202ENST00000414700 GALNT14Q96FL9 552 aa12.75□□□□□ -0.37
SHMT2-202ENST00000414700 RBM14Q96PK6 669 aaKnown RBP12.75□□□□□ -0.37
SHMT2-202ENST00000414700 C2orf88Q9BSF0 95 aa12.75□□□□□ -0.37
SHMT2-202ENST00000414700 C5orf66Q9H5L9 145 aa12.75□□□□□ -0.37
SHMT2-202ENST00000414700 METTL8Q9H825 291 aaKnown RBP12.75□□□□□ -0.37
SHMT2-202ENST00000414700 RPUSD1Q9UJJ7 312 aaKnown RBP12.75□□□□□ -0.37
SHMT2-202ENST00000414700 TMED3Q9Y3Q3 217 aa12.75□□□□□ -0.37
SHMT2-202ENST00000414700 TSTD3H0UI37 97 aa12.74□□□□□ -0.37
SHMT2-202ENST00000414700 AADACP22760 399 aa12.74□□□□□ -0.37
SHMT2-202ENST00000414700 DLX1P56177 255 aa12.74□□□□□ -0.37
SHMT2-202ENST00000414700 FXYD4P59646 89 aa12.74□□□□□ -0.37
SHMT2-202ENST00000414700 MEF2CQ06413 473 aaPredicted RBP12.74□□□□□ -0.37
SHMT2-202ENST00000414700 ANKRD55Q3KP44 614 aa12.74□□□□□ -0.37
SHMT2-202ENST00000414700 OR10V1Q8NGI7 309 aa12.74□□□□□ -0.37
SHMT2-202ENST00000414700 OR10D4PQ8NGN7 298 aa12.74□□□□□ -0.37
SHMT2-202ENST00000414700 CD300LFQ8TDQ1 290 aa12.74□□□□□ -0.37
SHMT2-202ENST00000414700 EIF5A2Q9GZV4 153 aaKnown RBP12.74□□□□□ -0.37
SHMT2-202ENST00000414700 DOK5Q9P104 306 aa12.74□□□□□ -0.37
SHMT2-202ENST00000414700 FBXL17Q9UF56 701 aa12.74□□□□□ -0.37
SHMT2-202ENST00000414700 BAHCC1Q9P281 2608 aa12.74□□□□□ -0.37
SHMT2-202ENST00000414700 CXorf65A6NEN9 183 aa12.74□□□□□ -0.37
SHMT2-202ENST00000414700 KIAA1324LA8MWY0 1029 aaPredicted RBP12.74□□□□□ -0.37
SHMT2-202ENST00000414700 NPIPB11E5RHQ5 1161 aa12.74□□□□□ -0.37
SHMT2-202ENST00000414700 SPINT2O43291 252 aa12.74□□□□□ -0.37
SHMT2-202ENST00000414700 HSPA12AO43301 675 aa12.74□□□□□ -0.37
SHMT2-202ENST00000414700 PI3P19957 117 aa12.74□□□□□ -0.37
SHMT2-202ENST00000414700 FPR2P25090 351 aa12.74□□□□□ -0.37
SHMT2-202ENST00000414700 PPP1CCP36873 323 aaKnown RBP12.74□□□□□ -0.37
SHMT2-202ENST00000414700 LOXL3P58215 753 aa12.74□□□□□ -0.37
SHMT2-202ENST00000414700 LCN2P80188 198 aa12.74□□□□□ -0.37
SHMT2-202ENST00000414700 PRAMEF5Q5TYX0 476 aa12.74□□□□□ -0.37
SHMT2-202ENST00000414700 LEAP2Q969E1 77 aa12.74□□□□□ -0.37
SHMT2-202ENST00000414700 ZNF714Q96N38 554 aa12.74□□□□□ -0.37
SHMT2-202ENST00000414700 SCGB3A2Q96PL1 93 aa12.74□□□□□ -0.37
SHMT2-202ENST00000414700 SLC35B3Q9H1N7 401 aa12.74□□□□□ -0.37
SHMT2-202ENST00000414700 UBE2J1Q9Y385 318 aaPredicted RBP12.74□□□□□ -0.37
SHMT2-202ENST00000414700 ELOA3CA0A087WX78 387 aaPredicted RBP12.73□□□□□ -0.37
SHMT2-202ENST00000414700 IGKV1D-13A0A0B4J2D9 117 aa12.73□□□□□ -0.37
SHMT2-202ENST00000414700 BTBD17A6NE02 478 aa12.73□□□□□ -0.37
SHMT2-202ENST00000414700 PPYP01298 95 aa12.73□□□□□ -0.37
SHMT2-202ENST00000414700 IGKV1-13P0DP09 117 aa12.73□□□□□ -0.37
SHMT2-202ENST00000414700 RPL12P30050 165 aaKnown RBP12.73□□□□□ -0.37
SHMT2-202ENST00000414700 CEACAM6P40199 344 aa12.73□□□□□ -0.37
SHMT2-202ENST00000414700 DLX6P56179 175 aa12.73□□□□□ -0.37
SHMT2-202ENST00000414700 CLINT1Q14677 625 aa12.73□□□□□ -0.37
SHMT2-202ENST00000414700 TRAT1Q6PIZ9 186 aa12.73□□□□□ -0.37
SHMT2-202ENST00000414700 KRTAP1-3Q8IUG1 177 aa12.73□□□□□ -0.37
SHMT2-202ENST00000414700 H1FOOQ8IZA3 346 aaPredicted RBP12.73□□□□□ -0.37
SHMT2-202ENST00000414700 C11orf42Q8N5U0 333 aa12.73□□□□□ -0.37
SHMT2-202ENST00000414700 UBAC2Q8NBM4 344 aa12.73□□□□□ -0.37
SHMT2-202ENST00000414700 TOMM40LQ969M1 308 aa12.73□□□□□ -0.37
SHMT2-202ENST00000414700 PBDC1Q9BVG4 233 aa12.73□□□□□ -0.37
SHMT2-202ENST00000414700 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.73□□□□□ -0.372e-7■■■■□ 26
SHMT2-202ENST00000414700 A0A087X0M5 115 aa12.72□□□□□ -0.37
SHMT2-202ENST00000414700 PPIAL4CA0A0B4J2A2 164 aa12.72□□□□□ -0.37
SHMT2-202ENST00000414700 A0A1B0GX30 115 aa12.72□□□□□ -0.37
SHMT2-202ENST00000414700 K7EPK0 472 aa12.72□□□□□ -0.37
SHMT2-202ENST00000414700 F2RL2O00254 374 aa12.72□□□□□ -0.37
SHMT2-202ENST00000414700 TUSC2O75896 110 aa12.72□□□□□ -0.37
SHMT2-202ENST00000414700 CTXN2P0C2S0 81 aa12.72□□□□□ -0.37
SHMT2-202ENST00000414700 ZNF728P0DKX0 622 aa12.72□□□□□ -0.37
SHMT2-202ENST00000414700 PPIAL4GP0DN37 164 aa12.72□□□□□ -0.37
SHMT2-202ENST00000414700 SUPT4H1P63272 117 aaKnown RBP12.72□□□□□ -0.37
SHMT2-202ENST00000414700 PRB3Q04118 309 aaPredicted RBP12.72□□□□□ -0.37
SHMT2-202ENST00000414700 Q5PR19 223 aa12.72□□□□□ -0.37
SHMT2-202ENST00000414700 FAM71E2Q8N5Q1 922 aa12.72□□□□□ -0.37
SHMT2-202ENST00000414700 MBD6Q96DN6 1003 aa12.72□□□□□ -0.37
SHMT2-202ENST00000414700 ARV1Q9H2C2 271 aa12.72□□□□□ -0.37
SHMT2-202ENST00000414700 PRR13Q9NZ81 148 aa12.72□□□□□ -0.37
SHMT2-202ENST00000414700 MYO9AB2RTY4 2548 aa12.72□□□□□ -0.37
SHMT2-202ENST00000414700 TEX15Q9BXT5 2789 aa12.72□□□□□ -0.37
SHMT2-202ENST00000414700 FLNAP21333 2647 aaKnown RBP12.72□□□□□ -0.37
SHMT2-202ENST00000414700 ZNF616Q08AN1 781 aa12.72□□□□□ -0.37
SHMT2-202ENST00000414700 LRRC75A-AS1Q8N1F1 130 aa12.72□□□□□ -0.37
SHMT2-202ENST00000414700 MOB3AQ96BX8 217 aa12.72□□□□□ -0.37
SHMT2-202ENST00000414700 TMEM68Q96MH6 324 aa12.72□□□□□ -0.37
SHMT2-202ENST00000414700 LINC00574Q9H8X3 128 aa12.72□□□□□ -0.37
SHMT2-202ENST00000414700 LPAR2Q9HBW0 351 aa12.72□□□□□ -0.37
SHMT2-202ENST00000414700 PPP1R14DQ9NXH3 145 aa12.72□□□□□ -0.37
SHMT2-202ENST00000414700 GSKIPQ9P0R6 139 aa12.72□□□□□ -0.37
SHMT2-202ENST00000414700 CR1P17927 2039 aa12.71□□□□□ -0.37
SHMT2-202ENST00000414700 LOC105371242A0A075B767 164 aa12.71□□□□□ -0.37
SHMT2-202ENST00000414700 A0A1B0GW64 132 aa12.71□□□□□ -0.37
SHMT2-202ENST00000414700 SEC11BP0C7V7 166 aa12.71□□□□□ -0.37
SHMT2-202ENST00000414700 CAMLGP49069 296 aa12.71□□□□□ -0.37
SHMT2-202ENST00000414700 DSCR9P59020 149 aa12.71□□□□□ -0.37
SHMT2-202ENST00000414700 HTD2P86397 168 aa12.71□□□□□ -0.37
SHMT2-202ENST00000414700 GAMTQ14353 236 aa12.71□□□□□ -0.37
SHMT2-202ENST00000414700 SURF2Q15527 256 aaPredicted RBP12.71□□□□□ -0.37
SHMT2-202ENST00000414700 LY6G5BQ8NDX9 201 aa12.71□□□□□ -0.37
SHMT2-202ENST00000414700 C8orf46Q8TAG6 207 aa12.71□□□□□ -0.37
SHMT2-202ENST00000414700 GNG12Q9UBI6 72 aa12.71□□□□□ -0.37
SHMT2-202ENST00000414700 PPP1R2P9O14990 202 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms