RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 PDLIM3Q53GG5 364 aaPredicted RBP14.67□□□□□ -0.06
SDCBP-202ENST00000413219 TRAT1Q6PIZ9 186 aa14.67□□□□□ -0.06
SDCBP-202ENST00000413219 MRGPRDQ8TDS7 321 aa14.67□□□□□ -0.06
SDCBP-202ENST00000413219 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.67□□□□□ -0.06
SDCBP-202ENST00000413219 OR9G9P0C7N8 305 aa14.67□□□□□ -0.06
SDCBP-202ENST00000413219 C3AR1Q16581 482 aa14.67□□□□□ -0.06
SDCBP-202ENST00000413219 ALKBH6Q3KRA9 238 aa14.67□□□□□ -0.06
SDCBP-202ENST00000413219 ZNF718Q3SXZ3 478 aa14.67□□□□□ -0.06
SDCBP-202ENST00000413219 TCF23Q7RTU1 214 aa14.67□□□□□ -0.06
SDCBP-202ENST00000413219 OCC1Q8TAD7 63 aa14.67□□□□□ -0.06
SDCBP-202ENST00000413219 SLC25A40Q8TBP6 338 aa14.67□□□□□ -0.06
SDCBP-202ENST00000413219 GGTLC1Q9BX51 225 aa14.67□□□□□ -0.06
SDCBP-202ENST00000413219 PATZ1Q9HBE1 687 aaKnown RBP14.67□□□□□ -0.06
SDCBP-202ENST00000413219 ARHGAP21Q5T5U3 1957 aa14.66□□□□□ -0.06
SDCBP-202ENST00000413219 SCO2A0A1W2PP80 73 aa14.66□□□□□ -0.06
SDCBP-202ENST00000413219 PRSS46E5RG02 174 aa14.66□□□□□ -0.06
SDCBP-202ENST00000413219 ADH4P08319 380 aa14.66□□□□□ -0.06
SDCBP-202ENST00000413219 BMP5P22003 454 aa14.66□□□□□ -0.06
SDCBP-202ENST00000413219 GABRA2P47869 451 aa14.66□□□□□ -0.06
SDCBP-202ENST00000413219 HTD2P86397 168 aa14.66□□□□□ -0.06
SDCBP-202ENST00000413219 PSG7Q13046 419 aa14.66□□□□□ -0.06
SDCBP-202ENST00000413219 HLA-CQ95604 372 aa14.66□□□□□ -0.06
SDCBP-202ENST00000413219 C11orf52Q96A22 123 aa14.66□□□□□ -0.06
SDCBP-202ENST00000413219 MGST2Q99735 147 aa14.66□□□□□ -0.06
SDCBP-202ENST00000413219 MIEN1Q9BRT3 115 aa14.66□□□□□ -0.06
SDCBP-202ENST00000413219 TP53TG3Q9ULZ0 132 aa14.66□□□□□ -0.06
SDCBP-202ENST00000413219 C9JCJ5 164 aa14.65□□□□□ -0.06
SDCBP-202ENST00000413219 CELA3BP08861 270 aa14.65□□□□□ -0.06
SDCBP-202ENST00000413219 VDAC2P45880 294 aaPredicted RBP14.65□□□□□ -0.06
SDCBP-202ENST00000413219 TGFBR3Q03167 851 aa14.65□□□□□ -0.06
SDCBP-202ENST00000413219 ZNF90Q03938 601 aa14.65□□□□□ -0.06
SDCBP-202ENST00000413219 FOXF2Q12947 444 aa14.65□□□□□ -0.06
SDCBP-202ENST00000413219 TPTE2P1Q5T6R2 138 aa14.65□□□□□ -0.06
SDCBP-202ENST00000413219 ACP7Q6ZNF0 438 aa14.65□□□□□ -0.06
SDCBP-202ENST00000413219 Q6ZWC4 215 aa14.65□□□□□ -0.06
SDCBP-202ENST00000413219 SDSLQ96GA7 329 aa14.65□□□□□ -0.06
SDCBP-202ENST00000413219 PSG11Q9UQ72 335 aa14.65□□□□□ -0.06
SDCBP-202ENST00000413219 DOCK10Q96BY6 2186 aa14.65□□□□□ -0.06
SDCBP-202ENST00000413219 TRBV9A0A0B4J1U6 114 aa14.65□□□□□ -0.06
SDCBP-202ENST00000413219 PATE3B3GLJ2 98 aa14.65□□□□□ -0.06
SDCBP-202ENST00000413219 RPLP1P05386 114 aaKnown RBP14.65□□□□□ -0.06
SDCBP-202ENST00000413219 CRISP2P16562 243 aa14.65□□□□□ -0.06
SDCBP-202ENST00000413219 RPL29P47914 159 aaKnown RBP14.65□□□□□ -0.06
SDCBP-202ENST00000413219 LINC00310P59036 64 aa14.65□□□□□ -0.06
SDCBP-202ENST00000413219 Q0VG73 95 aa14.65□□□□□ -0.06
SDCBP-202ENST00000413219 C11orf53Q8IXP5 236 aa14.65□□□□□ -0.06
SDCBP-202ENST00000413219 SPRY4Q9C004 299 aa14.65□□□□□ -0.06
SDCBP-202ENST00000413219 PPP1R14DQ9NXH3 145 aa14.65□□□□□ -0.06
SDCBP-202ENST00000413219 WNT9BO14905 357 aa14.64□□□□□ -0.07
SDCBP-202ENST00000413219 SPINT2O43291 252 aa14.64□□□□□ -0.07
SDCBP-202ENST00000413219 G0S2P27469 103 aa14.64□□□□□ -0.07
SDCBP-202ENST00000413219 DUTP33316 252 aaKnown RBP14.64□□□□□ -0.07
SDCBP-202ENST00000413219 PRAMEF5Q5TYX0 476 aa14.64□□□□□ -0.07
SDCBP-202ENST00000413219 PRAMEF6Q5VXH4 476 aa14.64□□□□□ -0.07
SDCBP-202ENST00000413219 TOMM20LQ6UXN7 152 aa14.64□□□□□ -0.07
SDCBP-202ENST00000413219 ZNF705AQ6ZN79 300 aaPredicted RBP14.64□□□□□ -0.07
SDCBP-202ENST00000413219 OR4A16Q8NH70 328 aa14.64□□□□□ -0.07
SDCBP-202ENST00000413219 MRPL18Q9H0U6 180 aaKnown RBP14.64□□□□□ -0.07
SDCBP-202ENST00000413219 CXXC4Q9H2H0 198 aa14.64□□□□□ -0.07
SDCBP-202ENST00000413219 MS4A5Q9H3V2 200 aa14.64□□□□□ -0.07
SDCBP-202ENST00000413219 PARD6AQ9NPB6 346 aa14.64□□□□□ -0.07
SDCBP-202ENST00000413219 IGHV3-64DA0A0J9YX35 117 aa14.64□□□□□ -0.07
SDCBP-202ENST00000413219 GRIFINA4D1Z8 144 aa14.64□□□□□ -0.07
SDCBP-202ENST00000413219 A8MXE2 369 aa14.64□□□□□ -0.07
SDCBP-202ENST00000413219 MT-CO2P00403 227 aa14.64□□□□□ -0.07
SDCBP-202ENST00000413219 CRYABP02511 175 aaKnown RBP14.64□□□□□ -0.07
SDCBP-202ENST00000413219 GCHFRP30047 84 aa14.64□□□□□ -0.07
SDCBP-202ENST00000413219 SSTR5P35346 364 aa14.64□□□□□ -0.07
SDCBP-202ENST00000413219 CASP6P55212 293 aa14.64□□□□□ -0.07
SDCBP-202ENST00000413219 GAGE1Q13065 139 aa14.64□□□□□ -0.07
SDCBP-202ENST00000413219 TMEM183BQ1AE95 376 aa14.64□□□□□ -0.07
SDCBP-202ENST00000413219 MIC13Q5XKP0 118 aa14.64□□□□□ -0.07
SDCBP-202ENST00000413219 Q6ZR03 302 aa14.64□□□□□ -0.07
SDCBP-202ENST00000413219 OR13A1Q8NGR1 328 aa14.64□□□□□ -0.07
SDCBP-202ENST00000413219 OBP2BQ9NPH6 170 aa14.64□□□□□ -0.07
SDCBP-202ENST00000413219 HEYLQ9NQ87 328 aaPredicted RBP14.64□□□□□ -0.07
SDCBP-202ENST00000413219 KLF13Q9Y2Y9 288 aaPredicted RBP14.64□□□□□ -0.07
SDCBP-202ENST00000413219 YTHDF2Q9Y5A9 579 aaKnown RBP14.64□□□□□ -0.07
SDCBP-202ENST00000413219 RRHO14718 337 aa14.63□□□□□ -0.07
SDCBP-202ENST00000413219 ZNF25P17030 456 aaPredicted RBP14.63□□□□□ -0.07
SDCBP-202ENST00000413219 CBLN1P23435 193 aa14.63□□□□□ -0.07
SDCBP-202ENST00000413219 ACP1P24666 158 aa14.63□□□□□ -0.07
SDCBP-202ENST00000413219 MEOX1P50221 254 aa14.63□□□□□ -0.07
SDCBP-202ENST00000413219 LGALS4P56470 323 aa14.63□□□□□ -0.07
SDCBP-202ENST00000413219 LSM4Q9Y4Z0 139 aaKnown RBP14.63□□□□□ -0.07
SDCBP-202ENST00000413219 TRGV10A0A0A0MS01 117 aa14.62□□□□□ -0.07
SDCBP-202ENST00000413219 C15orf65H3BRN8 121 aa14.62□□□□□ -0.07
SDCBP-202ENST00000413219 SERF1AO75920 110 aa14.62□□□□□ -0.07
SDCBP-202ENST00000413219 GPR12P47775 334 aa14.62□□□□□ -0.07
SDCBP-202ENST00000413219 LINC00205P59089 165 aa14.62□□□□□ -0.07
SDCBP-202ENST00000413219 ZNF826PQ6ZT77 177 aa14.62□□□□□ -0.07
SDCBP-202ENST00000413219 VASH2Q86V25 355 aa14.62□□□□□ -0.07
SDCBP-202ENST00000413219 OR5AU1Q8NGC0 362 aa14.62□□□□□ -0.07
SDCBP-202ENST00000413219 MAFAQ8NHW3 353 aaPredicted RBP14.62□□□□□ -0.07
SDCBP-202ENST00000413219 KLF14Q8TD94 323 aaPredicted RBP14.62□□□□□ -0.07
SDCBP-202ENST00000413219 UHRF2Q96PU4 802 aa14.62□□□□□ -0.07
SDCBP-202ENST00000413219 NPVFQ9HCQ7 196 aa14.62□□□□□ -0.07
SDCBP-202ENST00000413219 ARL2-SNX15V9GYD0 113 aa14.62□□□□□ -0.07
SDCBP-202ENST00000413219 IGHV3-43A0A0B4J1X8 118 aa14.62□□□□□ -0.07
SDCBP-202ENST00000413219 GFRA3O60609 400 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms