RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 PYGO2Q9BRQ0 406 aa11.78□□□□□ -0.52
CLTCL1-201ENST00000412649 DERL1Q9BUN8 251 aa11.78□□□□□ -0.52
CLTCL1-201ENST00000412649 GNB1LQ9BYB4 327 aa11.78□□□□□ -0.52
CLTCL1-201ENST00000412649 PRDM14Q9GZV8 571 aa11.78□□□□□ -0.52
CLTCL1-201ENST00000412649 UBE2ZQ9H832 354 aaPredicted RBP11.78□□□□□ -0.52
CLTCL1-201ENST00000412649 SLC25A5P05141 298 aaKnown RBP11.78□□□□□ -0.52
CLTCL1-201ENST00000412649 ERHP84090 104 aaKnown RBP11.78□□□□□ -0.52
CLTCL1-201ENST00000412649 ARL16Q0P5N6 197 aa11.78□□□□□ -0.52
CLTCL1-201ENST00000412649 Q6ZWC4 215 aa11.78□□□□□ -0.52
CLTCL1-201ENST00000412649 ZNF837Q96EG3 531 aaPredicted RBP11.78□□□□□ -0.52
CLTCL1-201ENST00000412649 COMMD5Q9GZQ3 224 aa11.78□□□□□ -0.52
CLTCL1-201ENST00000412649 A0A0G2JRQ6 117 aa11.78□□□□□ -0.52
CLTCL1-201ENST00000412649 GALR2O43603 387 aaPredicted RBP11.78□□□□□ -0.52
CLTCL1-201ENST00000412649 OR2H2O95918 312 aa11.78□□□□□ -0.52
CLTCL1-201ENST00000412649 SUB1P53999 127 aaKnown RBP eCLIP11.78□□□□□ -0.52
CLTCL1-201ENST00000412649 OR10J3Q5JRS4 329 aa11.78□□□□□ -0.52
CLTCL1-201ENST00000412649 TMEM164Q5U3C3 297 aa11.78□□□□□ -0.52
CLTCL1-201ENST00000412649 ZNF441Q8N8Z8 693 aa11.78□□□□□ -0.52
CLTCL1-201ENST00000412649 OR52L2PQ8NGH6 319 aa11.78□□□□□ -0.52
CLTCL1-201ENST00000412649 CHODLQ9H9P2 273 aa11.78□□□□□ -0.52
CLTCL1-201ENST00000412649 ZNF835Q9Y2P0 537 aa11.78□□□□□ -0.52
CLTCL1-201ENST00000412649 KIF26AQ9ULI4 1882 aaPredicted RBP11.78□□□□□ -0.52
CLTCL1-201ENST00000412649 EFNA2O43921 213 aa11.77□□□□□ -0.52
CLTCL1-201ENST00000412649 TMEM11P17152 192 aa11.77□□□□□ -0.52
CLTCL1-201ENST00000412649 PAX9P55771 341 aa11.77□□□□□ -0.52
CLTCL1-201ENST00000412649 PPIAL4AQ9Y536 164 aa11.77□□□□□ -0.52
CLTCL1-201ENST00000412649 E9PLN8 166 aa11.77□□□□□ -0.53
CLTCL1-201ENST00000412649 TDGF1P13385 188 aa11.77□□□□□ -0.53
CLTCL1-201ENST00000412649 UQCRFS1P47985 274 aa11.77□□□□□ -0.53
CLTCL1-201ENST00000412649 PDLIM4P50479 330 aa11.77□□□□□ -0.53
CLTCL1-201ENST00000412649 PNKDQ8N490 385 aa11.77□□□□□ -0.53
CLTCL1-201ENST00000412649 SHANK1Q9Y566 2161 aa11.77□□□□□ -0.53
CLTCL1-201ENST00000412649 DEFA4P12838 97 aa11.77□□□□□ -0.53
CLTCL1-201ENST00000412649 FAM122AQ96E09 287 aa11.77□□□□□ -0.53
CLTCL1-201ENST00000412649 COX11Q9Y6N1 276 aa11.77□□□□□ -0.53
CLTCL1-201ENST00000412649 FRMPD3Q5JV73 1810 aa11.77□□□□□ -0.53
CLTCL1-201ENST00000412649 OR4C46A6NHA9 309 aa11.77□□□□□ -0.53
CLTCL1-201ENST00000412649 ARL3P36405 182 aa11.77□□□□□ -0.53
CLTCL1-201ENST00000412649 PLP1P60201 277 aa11.77□□□□□ -0.53
CLTCL1-201ENST00000412649 C5orf24Q7Z6I8 188 aa11.77□□□□□ -0.53
CLTCL1-201ENST00000412649 FAM216AQ8WUB2 273 aa11.77□□□□□ -0.53
CLTCL1-201ENST00000412649 CYYR1Q96J86 154 aa11.77□□□□□ -0.53
CLTCL1-201ENST00000412649 DUSP13Q9UII6 198 aa11.77□□□□□ -0.53
CLTCL1-201ENST00000412649 CACNA1DQ01668 2161 aa11.76□□□□□ -0.53
CLTCL1-201ENST00000412649 OR4S2Q8NH73 311 aa11.76□□□□□ -0.53
CLTCL1-201ENST00000412649 OR1L1Q8NH94 360 aa11.76□□□□□ -0.53
CLTCL1-201ENST00000412649 CHRNA10Q9GZZ6 450 aa11.76□□□□□ -0.53
CLTCL1-201ENST00000412649 RNF115Q9Y4L5 304 aa11.76□□□□□ -0.53
CLTCL1-201ENST00000412649 SERTM2A0A1B0GWG4 89 aa11.76□□□□□ -0.53
CLTCL1-201ENST00000412649 NKX6-3A6NJ46 265 aa11.76□□□□□ -0.53
CLTCL1-201ENST00000412649 GPX1P07203 203 aa11.76□□□□□ -0.53
CLTCL1-201ENST00000412649 KIR2DS2P43631 304 aa11.76□□□□□ -0.53
CLTCL1-201ENST00000412649 TEX43Q6ZNM6 134 aa11.76□□□□□ -0.53
CLTCL1-201ENST00000412649 ZNF207O43670 478 aaKnown RBP11.76□□□□□ -0.53
CLTCL1-201ENST00000412649 AESQ08117 197 aa11.76□□□□□ -0.53
CLTCL1-201ENST00000412649 VWA1Q6PCB0 445 aa11.76□□□□□ -0.53
CLTCL1-201ENST00000412649 NUDT10Q8NFP7 164 aa11.76□□□□□ -0.53
CLTCL1-201ENST00000412649 NUDT11Q96G61 164 aa11.76□□□□□ -0.53
CLTCL1-201ENST00000412649 ZNF703Q9H7S9 590 aaPredicted RBP11.76□□□□□ -0.53
CLTCL1-201ENST00000412649 TICRRQ7Z2Z1 1910 aa11.76□□□□□ -0.53
CLTCL1-201ENST00000412649 HBZP02008 142 aa11.75□□□□□ -0.53
CLTCL1-201ENST00000412649 TSPOP30536 169 aa11.75□□□□□ -0.53
CLTCL1-201ENST00000412649 OPRK1P41145 380 aa11.75□□□□□ -0.53
CLTCL1-201ENST00000412649 CSN1S1P47710 185 aa11.75□□□□□ -0.53
CLTCL1-201ENST00000412649 PRRX1P54821 245 aa11.75□□□□□ -0.53
CLTCL1-201ENST00000412649 SRSF7Q16629 238 aaKnown RBP eCLIP11.75□□□□□ -0.53
CLTCL1-201ENST00000412649 CNEP1R1Q8N9A8 125 aa11.75□□□□□ -0.53
CLTCL1-201ENST00000412649 K7EQM0 130 aa11.75□□□□□ -0.53
CLTCL1-201ENST00000412649 IGHV3-13P01766 116 aa11.75□□□□□ -0.53
CLTCL1-201ENST00000412649 IGHV3-7P01780 117 aa11.75□□□□□ -0.53
CLTCL1-201ENST00000412649 IL6RP08887 468 aaPredicted RBP11.75□□□□□ -0.53
CLTCL1-201ENST00000412649 OR5P3Q8WZ94 311 aa11.75□□□□□ -0.53
CLTCL1-201ENST00000412649 FAM173AQ9BQD7 235 aa11.75□□□□□ -0.53
CLTCL1-201ENST00000412649 SP1P08047 785 aa11.75□□□□□ -0.53
CLTCL1-201ENST00000412649 GCSAMLQ5JQS6 135 aa11.75□□□□□ -0.53
CLTCL1-201ENST00000412649 NHLRC2Q8NBF2 726 aa11.75□□□□□ -0.53
CLTCL1-201ENST00000412649 EAF1Q96JC9 268 aaPredicted RBP11.75□□□□□ -0.53
CLTCL1-201ENST00000412649 SSBP3Q9BWW4 388 aaPredicted RBP11.75□□□□□ -0.53
CLTCL1-201ENST00000412649 TRAV30A0A087WSZ9 112 aa11.75□□□□□ -0.53
CLTCL1-201ENST00000412649 FOXI3A8MTJ6 420 aaPredicted RBP11.75□□□□□ -0.53
CLTCL1-201ENST00000412649 CA2P00918 260 aa11.75□□□□□ -0.53
CLTCL1-201ENST00000412649 IGKV1-5P01602 117 aa11.75□□□□□ -0.53
CLTCL1-201ENST00000412649 C3orf79P0CE67 100 aa11.75□□□□□ -0.53
CLTCL1-201ENST00000412649 RELBQ01201 579 aa11.75□□□□□ -0.53
CLTCL1-201ENST00000412649 OR1C1Q15619 314 aa11.75□□□□□ -0.53
CLTCL1-201ENST00000412649 TMEM14EPQ6UXP3 125 aa11.75□□□□□ -0.53
CLTCL1-201ENST00000412649 Q6ZRM9 215 aa11.75□□□□□ -0.53
CLTCL1-201ENST00000412649 PKIBQ9C010 78 aa11.75□□□□□ -0.53
CLTCL1-201ENST00000412649 C5orf67F2Z3F1 127 aa11.74□□□□□ -0.53
CLTCL1-201ENST00000412649 P01737 135 aa11.74□□□□□ -0.53
CLTCL1-201ENST00000412649 TWSG1Q9GZX9 223 aa11.74□□□□□ -0.53
CLTCL1-201ENST00000412649 IFNL4K9M1U5 179 aa11.74□□□□□ -0.53
CLTCL1-201ENST00000412649 CRYGSP22914 178 aa11.74□□□□□ -0.53
CLTCL1-201ENST00000412649 FCER1GP30273 86 aa11.74□□□□□ -0.53
CLTCL1-201ENST00000412649 ZNF137PP52743 207 aa11.74□□□□□ -0.53
CLTCL1-201ENST00000412649 WDR74Q6RFH5 385 aaPredicted RBP11.74□□□□□ -0.53
CLTCL1-201ENST00000412649 VHLLQ6RSH7 139 aa11.74□□□□□ -0.53
CLTCL1-201ENST00000412649 STPG3Q8N7X2 389 aa11.74□□□□□ -0.53
CLTCL1-201ENST00000412649 SRXN1Q9BYN0 137 aa11.74□□□□□ -0.53
CLTCL1-201ENST00000412649 HYPMO75409 117 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms