RNA–Protein interactions for RNA: ENST00000409096.5

CUL3-203, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 2,701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-203ENST00000409096 SPTA1P02549 2419 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 IGKV1D-37A0A075B6S9 117 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 TRAV8-2A0A0B4J237 113 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 A0A1W2PQL4 384 aaPredicted RBP1.29□□□□□ -2.2
CUL3-203ENST00000409096 GMNCA6NCL1 334 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 FAM183AA6NL82 134 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 I3L4J1 428 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 J3QLI3 93 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 ACOX3O15254 700 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 SLC31A1O15431 190 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 FABP7O15540 132 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 MPZL2O60487 215 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 SMIM24O75264 130 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 DEXIO95424 95 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 PTHLHP12272 177 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 CDK9P50750 372 aaKnown RBP1.29□□□□□ -2.2
CUL3-203ENST00000409096 NKX2-5P52952 324 aaPredicted RBP1.29□□□□□ -2.2
CUL3-203ENST00000409096 RHOAP61586 193 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 TMEM249Q2WGJ8 235 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 LAMTOR1Q6IAA8 161 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.29□□□□□ -2.2
CUL3-203ENST00000409096 OR8A1Q8NGG7 326 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 PACRGQ96M98 296 aaPredicted RBP1.29□□□□□ -2.2
CUL3-203ENST00000409096 TMEM56Q96MV1 263 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 PRSS27Q9BQR3 290 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 PARVBQ9HBI1 364 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 ASCL3Q9NQ33 180 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 PAIP2BQ9ULR5 123 aaKnown RBP1.29□□□□□ -2.2
CUL3-203ENST00000409096 MMACHCQ9Y4U1 282 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 NUBP2Q9Y5Y2 271 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 DYNC2H1Q8NCM8 4307 aaKnown RBP1.29□□□□□ -2.2
CUL3-203ENST00000409096 ZSWIM8A7E2V4 1837 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 MAP2P11137 1827 aaKnown RBP1.29□□□□□ -2.2
CUL3-203ENST00000409096 AFDNP55196 1824 aaKnown RBP1.29□□□□□ -2.2
CUL3-203ENST00000409096 IGKV3D-11A0A0A0MRZ8 115 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 IGKV1-12A0A0C4DH73 117 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 UBDO15205 165 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 SLC16A4O15374 487 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 AQP9O43315 295 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 FGF16O43320 207 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 NOS1APO75052 506 aaPredicted RBP1.29□□□□□ -2.2
CUL3-203ENST00000409096 IGKV1D-12P01611 117 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 IGHV3-53P01767 116 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 C8orf88P0DMB2 117 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 COILP38432 576 aaPredicted RBP1.29□□□□□ -2.2
CUL3-203ENST00000409096 RAP1GDS1P52306 607 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 TMEM33P57088 247 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 TAF9Q16594 264 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 GUK1Q16774 197 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 TMEM176BQ3YBM2 270 aaPredicted RBP1.29□□□□□ -2.2
CUL3-203ENST00000409096 CCDC58Q4VC31 144 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 RBM48Q5RL73 367 aaKnown RBP1.29□□□□□ -2.2
CUL3-203ENST00000409096 C3orf33Q6P1S2 294 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 DNM1P34Q6PK57 102 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 OLIG3Q7RTU3 272 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 MRPL52Q86TS9 123 aaKnown RBP1.29□□□□□ -2.2
CUL3-203ENST00000409096 CRLF3Q8IUI8 442 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 C2orf73Q8N5S3 287 aaPredicted RBP1.29□□□□□ -2.2
CUL3-203ENST00000409096 EIF4E3Q8N5X7 224 aaKnown RBP1.29□□□□□ -2.2
CUL3-203ENST00000409096 CCDC112Q8NEF3 446 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 OR11L1Q8NGX0 322 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 OR10J5Q8NHC4 309 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 ZNRF2Q8NHG8 242 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 DYDC1Q8WWB3 177 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 SLC25A44Q96H78 314 aaPredicted RBP1.29□□□□□ -2.2
CUL3-203ENST00000409096 TRIB3Q96RU7 358 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 B9D2Q9BPU9 175 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 NIPSNAP1Q9BPW8 284 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 DDA1Q9BW61 102 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 C4AP0C0L4 1744 aa1.29□□□□□ -2.2
CUL3-203ENST00000409096 FANCMQ8IYD8 2048 aa1.28□□□□□ -2.2
CUL3-203ENST00000409096 FAM186AA6NE01 2351 aa1.28□□□□□ -2.2
CUL3-203ENST00000409096 CCDC171Q6TFL3 1326 aa1.28□□□□□ -2.2
CUL3-203ENST00000409096 OR5H14A6NHG9 310 aa1.28□□□□□ -2.2
CUL3-203ENST00000409096 LEUTXA8MZ59 168 aa1.28□□□□□ -2.2
CUL3-203ENST00000409096 MIF4GDA9UHW6 222 aaKnown RBP1.28□□□□□ -2.2
CUL3-203ENST00000409096 M0R036 132 aa1.28□□□□□ -2.2
CUL3-203ENST00000409096 DHFRP00374 187 aa1.28□□□□□ -2.2
CUL3-203ENST00000409096 TNNC2P02585 160 aa1.28□□□□□ -2.2
CUL3-203ENST00000409096 CRHP06850 196 aa1.28□□□□□ -2.2
CUL3-203ENST00000409096 NBEAP1P0C6P0 100 aa1.28□□□□□ -2.2
CUL3-203ENST00000409096 OCM2P0CE71 109 aa1.28□□□□□ -2.2
CUL3-203ENST00000409096 ZNF708P17019 499 aa1.28□□□□□ -2.2
CUL3-203ENST00000409096 PYCR1P32322 319 aa1.28□□□□□ -2.2
CUL3-203ENST00000409096 LSM6P62312 80 aaKnown RBP1.28□□□□□ -2.2
CUL3-203ENST00000409096 DHRS2Q13268 280 aa1.28□□□□□ -2.2
CUL3-203ENST00000409096 TMED2Q15363 201 aa1.28□□□□□ -2.2
CUL3-203ENST00000409096 SDHAF4Q5VUM1 108 aa1.28□□□□□ -2.2
CUL3-203ENST00000409096 TCF23Q7RTU1 214 aa1.28□□□□□ -2.2
CUL3-203ENST00000409096 PKMYT1Q99640 499 aa1.28□□□□□ -2.2
CUL3-203ENST00000409096 EBPLQ9BY08 206 aa1.28□□□□□ -2.2
CUL3-203ENST00000409096 BCL2L14Q9BZR8 327 aa1.28□□□□□ -2.2
CUL3-203ENST00000409096 ALX4Q9H161 411 aaPredicted RBP1.28□□□□□ -2.2
CUL3-203ENST00000409096 BATF3Q9NR55 127 aa1.28□□□□□ -2.2
CUL3-203ENST00000409096 PLEKHJ1Q9NW61 149 aa1.28□□□□□ -2.2
CUL3-203ENST00000409096 C1orf109Q9NX04 203 aa1.28□□□□□ -2.2
CUL3-203ENST00000409096 FBXL3Q9UKT7 428 aa1.28□□□□□ -2.2
CUL3-203ENST00000409096 GINS2Q9Y248 185 aa1.28□□□□□ -2.2
CUL3-203ENST00000409096 TRAPPC1Q9Y5R8 145 aa1.28□□□□□ -2.2
CUL3-203ENST00000409096 CELSR2Q9HCU4 2923 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms