RNA–Protein interactions for RNA: ENST00000407595.2

CCDC85A-201, Transcript of coiled-coil domain containing 85A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC85A, Length 3,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85A-201ENST00000407595 TMEM56Q96MV1 263 aa13.28□□□□□ -0.28
CCDC85A-201ENST00000407595 MANBALQ9NQG1 85 aa13.28□□□□□ -0.28
CCDC85A-201ENST00000407595 TMEM56-RWDD3S4R434 201 aa13.28□□□□□ -0.28
CCDC85A-201ENST00000407595 OR2H2O95918 312 aa13.28□□□□□ -0.28
CCDC85A-201ENST00000407595 CEACAM1P13688 526 aa13.28□□□□□ -0.28
CCDC85A-201ENST00000407595 OR52L2PQ8NGH6 319 aa13.28□□□□□ -0.28
CCDC85A-201ENST00000407595 GTF3AQ92664 365 aaKnown RBP13.28□□□□□ -0.28
CCDC85A-201ENST00000407595 OR2V2Q96R30 315 aa13.28□□□□□ -0.28
CCDC85A-201ENST00000407595 NDUFAF3Q9BU61 184 aa13.28□□□□□ -0.28
CCDC85A-201ENST00000407595 CECR9P0C854 216 aa13.28□□□□□ -0.28
CCDC85A-201ENST00000407595 ABLIM2Q6H8Q1 611 aa13.28□□□□□ -0.28
CCDC85A-201ENST00000407595 OR51G1Q8NGK1 321 aa13.28□□□□□ -0.28
CCDC85A-201ENST00000407595 ITLN1Q8WWA0 313 aa13.28□□□□□ -0.28
CCDC85A-201ENST00000407595 DCTN5Q9BTE1 182 aa13.28□□□□□ -0.28
CCDC85A-201ENST00000407595 WDR61Q9GZS3 305 aaKnown RBP13.28□□□□□ -0.28
CCDC85A-201ENST00000407595 WNT5AP41221 380 aa13.27□□□□□ -0.28
CCDC85A-201ENST00000407595 RPL23P62829 140 aaKnown RBP13.27□□□□□ -0.28
CCDC85A-201ENST00000407595 TIGITQ495A1 244 aa13.27□□□□□ -0.28
CCDC85A-201ENST00000407595 CXXC4Q9H2H0 198 aa13.27□□□□□ -0.28
CCDC85A-201ENST00000407595 DLL3Q9NYJ7 618 aa13.27□□□□□ -0.28
CCDC85A-201ENST00000407595 NKX6-3A6NJ46 265 aa13.27□□□□□ -0.29
CCDC85A-201ENST00000407595 MPV17P39210 176 aa13.27□□□□□ -0.29
CCDC85A-201ENST00000407595 A0A1W2PNU3 283 aaPredicted RBP13.27□□□□□ -0.29
CCDC85A-201ENST00000407595 PGPEP1LA6NFU8 196 aa13.27□□□□□ -0.29
CCDC85A-201ENST00000407595 C16orf97H3BN30 126 aa13.27□□□□□ -0.29
CCDC85A-201ENST00000407595 ZG16O60844 167 aa13.27□□□□□ -0.29
CCDC85A-201ENST00000407595 PSG7Q13046 419 aa13.27□□□□□ -0.29
CCDC85A-201ENST00000407595 HERPUD1Q15011 391 aa13.27□□□□□ -0.29
CCDC85A-201ENST00000407595 PRR27Q6MZM9 219 aa13.27□□□□□ -0.29
CCDC85A-201ENST00000407595 ZNF664Q8N3J9 261 aa13.27□□□□□ -0.29
CCDC85A-201ENST00000407595 OR10X1Q8NGY0 326 aa13.27□□□□□ -0.29
CCDC85A-201ENST00000407595 OR1L1Q8NH94 360 aa13.27□□□□□ -0.29
CCDC85A-201ENST00000407595 RND1Q92730 232 aa13.27□□□□□ -0.29
CCDC85A-201ENST00000407595 ACY3Q96HD9 319 aa13.27□□□□□ -0.29
CCDC85A-201ENST00000407595 ZNF331Q9NQX6 463 aaPredicted RBP13.27□□□□□ -0.29
CCDC85A-201ENST00000407595 CLCF1Q9UBD9 225 aa13.27□□□□□ -0.29
CCDC85A-201ENST00000407595 ANAPC10Q9UM13 185 aa13.27□□□□□ -0.29
CCDC85A-201ENST00000407595 RPLP1P05386 114 aaKnown RBP13.26□□□□□ -0.29
CCDC85A-201ENST00000407595 CTSSP25774 331 aa13.26□□□□□ -0.29
CCDC85A-201ENST00000407595 LBHQ53QV2 105 aaPredicted RBP13.26□□□□□ -0.29
CCDC85A-201ENST00000407595 CYP2G1PQ6ZSU1 146 aa13.26□□□□□ -0.29
CCDC85A-201ENST00000407595 ZNF525Q8N782 197 aa13.26□□□□□ -0.29
CCDC85A-201ENST00000407595 OR5AU1Q8NGC0 362 aa13.26□□□□□ -0.29
CCDC85A-201ENST00000407595 SNURFLB1AK76 121 aa13.26□□□□□ -0.29
CCDC85A-201ENST00000407595 C1QTNF9BB2RNN3 333 aa13.26□□□□□ -0.29
CCDC85A-201ENST00000407595 CCL21O00585 134 aa13.26□□□□□ -0.29
CCDC85A-201ENST00000407595 REG1BP48304 166 aa13.26□□□□□ -0.29
CCDC85A-201ENST00000407595 HNRNPA3P51991 378 aaKnown RBP13.26□□□□□ -0.29
CCDC85A-201ENST00000407595 SSX7Q7RTT5 188 aa13.26□□□□□ -0.29
CCDC85A-201ENST00000407595 Q8IYB0 196 aa13.26□□□□□ -0.29
CCDC85A-201ENST00000407595 PRDM14Q9GZV8 571 aa13.26□□□□□ -0.29
CCDC85A-201ENST00000407595 TCF21O43680 179 aa13.26□□□□□ -0.29
CCDC85A-201ENST00000407595 APELAP0DMC3 54 aa13.26□□□□□ -0.29
CCDC85A-201ENST00000407595 WT1P19544 449 aaPredicted RBP13.26□□□□□ -0.29
CCDC85A-201ENST00000407595 IMMP2LQ96T52 175 aa13.26□□□□□ -0.29
CCDC85A-201ENST00000407595 CCL13Q99616 98 aa13.26□□□□□ -0.29
CCDC85A-201ENST00000407595 YLPM1P49750 1951 aaKnown RBP13.26□□□□□ -0.29
CCDC85A-201ENST00000407595 PPIHO43447 177 aaKnown RBP13.25□□□□□ -0.29
CCDC85A-201ENST00000407595 SPCS3P61009 180 aa13.25□□□□□ -0.29
CCDC85A-201ENST00000407595 UNQ6494/PRO21346Q6UXR6 183 aa13.25□□□□□ -0.29
CCDC85A-201ENST00000407595 ZNRF1Q8ND25 227 aa13.25□□□□□ -0.29
CCDC85A-201ENST00000407595 SONP18583 2426 aaKnown RBP13.25□□□□□ -0.29
CCDC85A-201ENST00000407595 A0A0G2JRQ6 117 aa13.25□□□□□ -0.29
CCDC85A-201ENST00000407595 AHRRA9YTQ3 701 aa13.25□□□□□ -0.29
CCDC85A-201ENST00000407595 ZNF253O75346 499 aa13.25□□□□□ -0.29
CCDC85A-201ENST00000407595 GNB1P62873 340 aa13.25□□□□□ -0.29
CCDC85A-201ENST00000407595 ATP6V1FQ16864 119 aa13.25□□□□□ -0.29
CCDC85A-201ENST00000407595 KIAA1644Q3SXP7 199 aa13.25□□□□□ -0.29
CCDC85A-201ENST00000407595 Q6ZT83 130 aa13.25□□□□□ -0.29
CCDC85A-201ENST00000407595 S1PR3Q99500 378 aa13.25□□□□□ -0.29
CCDC85A-201ENST00000407595 LRFN3Q9BTN0 628 aa13.25□□□□□ -0.29
CCDC85A-201ENST00000407595 NUBP1P53384 320 aa13.25□□□□□ -0.29
CCDC85A-201ENST00000407595 PRB3Q04118 309 aaPredicted RBP13.25□□□□□ -0.29
CCDC85A-201ENST00000407595 POM121L2Q96KW2 1035 aa13.25□□□□□ -0.29
CCDC85A-201ENST00000407595 REPIN1Q9BWE0 567 aaKnown RBP13.25□□□□□ -0.29
CCDC85A-201ENST00000407595 PLSCR2Q9NRY7 297 aa13.25□□□□□ -0.29
CCDC85A-201ENST00000407595 SETD2Q9BYW2 2564 aaPredicted RBP13.25□□□□□ -0.29
CCDC85A-201ENST00000407595 TRGV10A0A0A0MS01 117 aa13.24□□□□□ -0.29
CCDC85A-201ENST00000407595 FAM157AC9JC47 383 aa13.24□□□□□ -0.29
CCDC85A-201ENST00000407595 COX7A1P24310 79 aa13.24□□□□□ -0.29
CCDC85A-201ENST00000407595 LRRC75BQ2VPJ9 315 aa13.24□□□□□ -0.29
CCDC85A-201ENST00000407595 C1orf185Q5T7R7 199 aa13.24□□□□□ -0.29
CCDC85A-201ENST00000407595 FAM90A2PQ658T7 463 aa13.24□□□□□ -0.29
CCDC85A-201ENST00000407595 MRPL54Q6P161 138 aaKnown RBP13.24□□□□□ -0.29
CCDC85A-201ENST00000407595 TCF23Q7RTU1 214 aa13.24□□□□□ -0.29
CCDC85A-201ENST00000407595 PRDM13Q9H4Q3 707 aa13.24□□□□□ -0.29
CCDC85A-201ENST00000407595 SLC35D1Q9NTN3 355 aa13.24□□□□□ -0.29
CCDC85A-201ENST00000407595 GZMBP10144 247 aa13.24□□□□□ -0.29
CCDC85A-201ENST00000407595 CBLN1P23435 193 aa13.24□□□□□ -0.29
CCDC85A-201ENST00000407595 TNFRSF9Q07011 255 aa13.24□□□□□ -0.29
CCDC85A-201ENST00000407595 Q6ZN92 141 aa13.24□□□□□ -0.29
CCDC85A-201ENST00000407595 RPRMLQ8N4K4 120 aa13.24□□□□□ -0.29
CCDC85A-201ENST00000407595 ZDHHC16Q969W1 377 aa13.24□□□□□ -0.29
CCDC85A-201ENST00000407595 WISP2O76076 250 aa13.24□□□□□ -0.29
CCDC85A-201ENST00000407595 OR4A8P0C604 315 aa13.24□□□□□ -0.29
CCDC85A-201ENST00000407595 ACSM6Q6P461 480 aa13.24□□□□□ -0.29
CCDC85A-201ENST00000407595 LYPD6BQ8NI32 183 aa13.24□□□□□ -0.29
CCDC85A-201ENST00000407595 BCL2L2Q92843 193 aaPredicted RBP13.24□□□□□ -0.29
CCDC85A-201ENST00000407595 HS3ST6Q96QI5 342 aa13.24□□□□□ -0.29
CCDC85A-201ENST00000407595 SAP30LQ9HAJ7 183 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms