RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 C9orf139Q6ZV77 190 aa16.44■□□□□ 0.22
CHKB-201ENST00000406938 SSX9Q7RTT3 188 aa16.44■□□□□ 0.22
CHKB-201ENST00000406938 BCL6BQ8N143 479 aaPredicted RBP16.44■□□□□ 0.22
CHKB-201ENST00000406938 RRNAD1Q96FB5 475 aaKnown RBP16.44■□□□□ 0.22
CHKB-201ENST00000406938 RITA1Q96K30 269 aa16.44■□□□□ 0.22
CHKB-201ENST00000406938 C13orf42A0A1B0GVH6 325 aa16.43■□□□□ 0.22
CHKB-201ENST00000406938 C5orf51A6NDU8 294 aa16.43■□□□□ 0.22
CHKB-201ENST00000406938 SRRM4A7MD48 611 aaKnown RBP16.43■□□□□ 0.22
CHKB-201ENST00000406938 LY6G6DO95868 133 aa16.43■□□□□ 0.22
CHKB-201ENST00000406938 HRASP01112 189 aa16.43■□□□□ 0.22
CHKB-201ENST00000406938 BRS3P32247 399 aa16.43■□□□□ 0.22
CHKB-201ENST00000406938 ERVK-16P61578 105 aa16.43■□□□□ 0.22
CHKB-201ENST00000406938 RPS16P62249 146 aaKnown RBP16.43■□□□□ 0.22
CHKB-201ENST00000406938 FBLN7Q53RD9 439 aa16.43■□□□□ 0.22
CHKB-201ENST00000406938 DMBX1Q8NFW5 382 aa16.43■□□□□ 0.22
CHKB-201ENST00000406938 LSM10Q969L4 123 aaKnown RBP16.43■□□□□ 0.22
CHKB-201ENST00000406938 RHOVQ96L33 236 aa16.43■□□□□ 0.22
CHKB-201ENST00000406938 MEGF9Q9H1U4 602 aa16.43■□□□□ 0.22
CHKB-201ENST00000406938 MDFIC2A0A1B0GVS7 189 aa16.42■□□□□ 0.22
CHKB-201ENST00000406938 FAM90A9PA6NNJ1 464 aa16.42■□□□□ 0.22
CHKB-201ENST00000406938 HNRNPCP07910 306 aaKnown RBP eCLIP16.42■□□□□ 0.22
CHKB-201ENST00000406938 P0C879 139 aa16.42■□□□□ 0.22
CHKB-201ENST00000406938 FOSL1P15407 271 aa16.42■□□□□ 0.22
CHKB-201ENST00000406938 HES1Q14469 280 aa16.42■□□□□ 0.22
CHKB-201ENST00000406938 IZUMO4Q1ZYL8 232 aa16.42■□□□□ 0.22
CHKB-201ENST00000406938 OR10C1Q96KK4 312 aa16.42■□□□□ 0.22
CHKB-201ENST00000406938 MMP24Q9Y5R2 645 aa16.42■□□□□ 0.22
CHKB-201ENST00000406938 MOSP00540 346 aa16.41■□□□□ 0.22
CHKB-201ENST00000406938 CD83Q01151 205 aa16.41■□□□□ 0.22
CHKB-201ENST00000406938 POU2AF1Q16633 256 aa16.41■□□□□ 0.22
CHKB-201ENST00000406938 DEFB112Q30KQ8 113 aa16.41■□□□□ 0.22
CHKB-201ENST00000406938 GSG1LQ6UXU4 331 aa16.41■□□□□ 0.22
CHKB-201ENST00000406938 H2BFWTQ7Z2G1 175 aa16.41■□□□□ 0.22
CHKB-201ENST00000406938 GPR146Q96CH1 333 aa16.41■□□□□ 0.22
CHKB-201ENST00000406938 PDCD10Q9BUL8 212 aa16.41■□□□□ 0.22
CHKB-201ENST00000406938 CHIAQ9BZP6 476 aa16.41■□□□□ 0.22
CHKB-201ENST00000406938 ZNF436Q9C0F3 470 aaPredicted RBP16.41■□□□□ 0.22
CHKB-201ENST00000406938 TMEM140Q9NV12 185 aa16.41■□□□□ 0.22
CHKB-201ENST00000406938 IGLV2-23P01705 113 aa16.41■□□□□ 0.22
CHKB-201ENST00000406938 SAA1P0DJI8 122 aaPredicted RBP16.41■□□□□ 0.22
CHKB-201ENST00000406938 DYNLT3P51808 116 aa16.41■□□□□ 0.22
CHKB-201ENST00000406938 HNF4GQ14541 408 aa16.41■□□□□ 0.22
CHKB-201ENST00000406938 IAH1Q2TAA2 248 aaPredicted RBP16.41■□□□□ 0.22
CHKB-201ENST00000406938 OR4A47Q6IF82 309 aa16.41■□□□□ 0.22
CHKB-201ENST00000406938 FAM219AQ8IW50 185 aa16.41■□□□□ 0.22
CHKB-201ENST00000406938 OR2T10Q8NGZ9 312 aa16.41■□□□□ 0.22
CHKB-201ENST00000406938 EAF1Q96JC9 268 aaPredicted RBP16.41■□□□□ 0.22
CHKB-201ENST00000406938 FAM106CPP0CH98 169 aa16.4■□□□□ 0.22
CHKB-201ENST00000406938 HNF1AP20823 631 aa16.4■□□□□ 0.22
CHKB-201ENST00000406938 CNTFRP26992 372 aa16.4■□□□□ 0.22
CHKB-201ENST00000406938 LGALS7P47929 136 aa16.4■□□□□ 0.22
CHKB-201ENST00000406938 EBI3Q14213 229 aa16.4■□□□□ 0.22
CHKB-201ENST00000406938 LRRC75BQ2VPJ9 315 aa16.4■□□□□ 0.22
CHKB-201ENST00000406938 AKAP14Q86UN6 197 aa16.4■□□□□ 0.22
CHKB-201ENST00000406938 WDR89Q96FK6 387 aaPredicted RBP16.4■□□□□ 0.22
CHKB-201ENST00000406938 AIFM2Q9BRQ8 373 aa16.4■□□□□ 0.22
CHKB-201ENST00000406938 CACNG5Q9UF02 275 aa16.4■□□□□ 0.22
CHKB-201ENST00000406938 CCNKO75909 580 aa16.39■□□□□ 0.21
CHKB-201ENST00000406938 SRP14P37108 136 aaKnown RBP16.39■□□□□ 0.21
CHKB-201ENST00000406938 THOC7Q6I9Y2 204 aaKnown RBP16.39■□□□□ 0.21
CHKB-201ENST00000406938 Q6ZRM9 215 aa16.39■□□□□ 0.21
CHKB-201ENST00000406938 THNSL2Q86YJ6 484 aa16.39■□□□□ 0.21
CHKB-201ENST00000406938 SPIN2AQ99865 258 aa16.39■□□□□ 0.21
CHKB-201ENST00000406938 SSX3Q99909 188 aa16.39■□□□□ 0.21
CHKB-201ENST00000406938 RNF5Q99942 180 aa16.39■□□□□ 0.21
CHKB-201ENST00000406938 SPIN2BQ9BPZ2 258 aa16.39■□□□□ 0.21
CHKB-201ENST00000406938 NEURL2Q9BR09 285 aa16.39■□□□□ 0.21
CHKB-201ENST00000406938 RANBP3Q9H6Z4 567 aaPredicted RBP16.39■□□□□ 0.21
CHKB-201ENST00000406938 TMEM160Q9NX00 188 aa16.39■□□□□ 0.21
CHKB-201ENST00000406938 SLC25A17O43808 307 aa16.38■□□□□ 0.21
CHKB-201ENST00000406938 OR9G9P0C7N8 305 aa16.38■□□□□ 0.21
CHKB-201ENST00000406938 TMEM11P17152 192 aa16.38■□□□□ 0.21
CHKB-201ENST00000406938 MMDQ15546 238 aa16.38■□□□□ 0.21
CHKB-201ENST00000406938 CLEC9AQ6UXN8 241 aa16.38■□□□□ 0.21
CHKB-201ENST00000406938 PUSL1Q8N0Z8 303 aaKnown RBP16.38■□□□□ 0.21
CHKB-201ENST00000406938 Q8N6K4 173 aa16.38■□□□□ 0.21
CHKB-201ENST00000406938 PIFOQ8TCI5 191 aa16.38■□□□□ 0.21
CHKB-201ENST00000406938 C2orf50Q96LR7 162 aa16.38■□□□□ 0.21
CHKB-201ENST00000406938 TSNAXQ99598 290 aaKnown RBP16.38■□□□□ 0.21
CHKB-201ENST00000406938 RANGRFQ9HD47 186 aaPredicted RBP16.38■□□□□ 0.21
CHKB-201ENST00000406938 A0A1B0GU03 582 aa16.37■□□□□ 0.21
CHKB-201ENST00000406938 OR2A4O95047 310 aa16.37■□□□□ 0.21
CHKB-201ENST00000406938 GIPP09681 153 aaPredicted RBP16.37■□□□□ 0.21
CHKB-201ENST00000406938 UBE2KP61086 200 aa16.37■□□□□ 0.21
CHKB-201ENST00000406938 SMCO1Q147U7 214 aa16.37■□□□□ 0.21
CHKB-201ENST00000406938 VMA21Q3ZAQ7 101 aa16.37■□□□□ 0.21
CHKB-201ENST00000406938 ZBTB8BQ8NAP8 495 aaPredicted RBP16.37■□□□□ 0.21
CHKB-201ENST00000406938 ST6GAL2Q96JF0 529 aa16.37■□□□□ 0.21
CHKB-201ENST00000406938 OR2A7Q96R45 310 aa16.37■□□□□ 0.21
CHKB-201ENST00000406938 BET1LQ9NYM9 111 aa16.37■□□□□ 0.21
CHKB-201ENST00000406938 GSKIPQ9P0R6 139 aa16.37■□□□□ 0.21
CHKB-201ENST00000406938 NSG2Q9Y328 171 aa16.37■□□□□ 0.21
CHKB-201ENST00000406938 TRAV3A0A0B4J244 114 aa16.37■□□□□ 0.21
CHKB-201ENST00000406938 H3BUX3 64 aa16.37■□□□□ 0.21
CHKB-201ENST00000406938 KBTBD11O94819 623 aa16.37■□□□□ 0.21
CHKB-201ENST00000406938 SLC25A6P12236 298 aa16.37■□□□□ 0.21
CHKB-201ENST00000406938 F2RL1P55085 397 aa16.37■□□□□ 0.21
CHKB-201ENST00000406938 SRSF4Q08170 494 aaKnown RBP16.37■□□□□ 0.21
CHKB-201ENST00000406938 CD300CQ08708 224 aa16.37■□□□□ 0.21
CHKB-201ENST00000406938 PSG5Q15238 335 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms