RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 LOC105371242A0A075B767 164 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 ZNF785A8K8V0 405 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 F8VVB4 439 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 F8VWA3 439 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 CHEK1O14757 476 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 TCAPO15273 167 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 FOXH1O75593 365 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 IGKV3-15P01624 115 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 FAM106CPP0CH98 169 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 RAB5AP20339 215 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 PDLIM4P50479 330 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 RUNX1Q01196 453 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 ARL16Q0P5N6 197 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 HABP2Q14520 560 aaPredicted RBP3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 PSG5Q15238 335 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 TUSC1Q2TAM9 212 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 WDR73Q6P4I2 378 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 PQLC2Q6ZP29 291 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 DNM1P46Q6ZS02 220 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 EIF4E3Q8N5X7 224 aaKnown RBP3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 ARL6IP6Q8N6S5 226 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 NUP37Q8NFH4 326 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 OR4P4Q8NGL7 312 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 OR4A5Q8NH83 315 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 SSMEM1Q8WWF3 244 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 TMEM18Q96B42 140 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 RBM14Q96PK6 669 aaKnown RBP3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 TXN2Q99757 166 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 RNF126Q9BV68 326 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 QTRT1Q9BXR0 403 aaKnown RBP3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 CBY3A6NI87 242 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 NPIPB11E5RHQ5 1161 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 H3BQ15 152 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 PAGE4O60829 102 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 IGLV3-1P01715 115 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 ARG1P05089 322 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 ORM2P19652 201 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 RAB4AP20338 218 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 REG1BP48304 166 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 ID3Q02535 119 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 FABP9Q0Z7S8 132 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 ZNF273Q14593 569 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 RNFT1Q5M7Z0 435 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 NECAP1Q8NC96 275 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 OR10G8Q8NGN5 311 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 LINC01560Q8TB33 94 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 ZNF430Q9H8G1 570 aaPredicted RBP3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 HIF1ANQ9NWT6 349 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 IL36RNQ9UBH0 155 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 TIMM8BQ9Y5J9 83 aaPredicted RBP3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 EP400Q96L91 3159 aa3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 IGKV1D-8A0A087WSZ0 117 aa3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 MED19A0JLT2 244 aaPredicted RBP3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 IGSF23A1L1A6 192 aa3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 C5orf63A6NC05 138 aa3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 MSGN1A6NI15 193 aa3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 SIGLEC5O15389 551 aa3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 ZG16O60844 167 aa3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 HYPMO75409 117 aa3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 COX6B1P14854 86 aa3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 OR10J1P30954 320 aa3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 ARL3P36405 182 aa3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 LYZP61626 148 aa3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 PCSK4Q6UW60 755 aa3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 OR2T10Q8NGZ9 312 aa3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 VPS25Q9BRG1 176 aa3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 RSG1Q9BU20 258 aa3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 RAXQ9Y2V3 346 aa3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 MUC22E2RYF6 1773 aaPredicted RBP3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 CACNA1HO95180 2353 aa3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 TRAV30A0A087WSZ9 112 aa3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 IGKV1D-13A0A0B4J2D9 117 aa3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 KCNAB3O43448 404 aa3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 GOSR1O95249 250 aa3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 IGHV1-46P01743 117 aa3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 IGKV1-13P0DP09 117 aa3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 RPL11P62913 178 aaKnown RBP3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 MEF2BQ02080 365 aaPredicted RBP3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 LRRC75BQ2VPJ9 315 aa3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 FAM24BQ8N5W8 94 aa3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 FAM216BQ8N7L0 139 aa3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 OR1B1Q8NGR6 318 aa3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 TNFRSF14Q92956 283 aa3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 SNRNP40Q96DI7 357 aaKnown RBP3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 PIMREGQ9BSJ6 248 aa3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 METTL1Q9UBP6 276 aaKnown RBP3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 COL4A3Q01955 1670 aa3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 KIAA1549LQ6ZVL6 1849 aa3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 C17orf98A8MV24 154 aa3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 WISP1O95388 367 aa3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 PTBP3O95758 552 aaKnown RBP3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 SCGB1D1O95968 90 aa3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 CLEC3BP05452 202 aa3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 PAX5Q02548 391 aa3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 OR4D5Q8NGN0 318 aa3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 GPHA2Q96T91 129 aa3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 MRPL32Q9BYC8 188 aaKnown RBP3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 SPRY4Q9C004 299 aa3.98□□□□□ -1.77
PCDH11X-207ENST00000406881 SNRNP200O75643 2136 aaKnown RBP3.97□□□□□ -1.77
PCDH11X-207ENST00000406881 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms