RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 LEUTXA8MZ59 168 aa9.59□□□□□ -0.87
CACNA1C-217ENST00000399641 IGFBP6P24592 240 aaPredicted RBP9.59□□□□□ -0.87
CACNA1C-217ENST00000399641 TSPOP30536 169 aa9.59□□□□□ -0.87
CACNA1C-217ENST00000399641 LEPP41159 167 aa9.59□□□□□ -0.87
CACNA1C-217ENST00000399641 TPTE2P1Q5T6R2 138 aa9.59□□□□□ -0.87
CACNA1C-217ENST00000399641 PPIAL4CA0A0B4J2A2 164 aa9.59□□□□□ -0.87
CACNA1C-217ENST00000399641 PPIAL4GP0DN37 164 aa9.59□□□□□ -0.87
CACNA1C-217ENST00000399641 PGFP49763 221 aa9.59□□□□□ -0.87
CACNA1C-217ENST00000399641 TMEM105Q8N8V8 129 aa9.59□□□□□ -0.87
CACNA1C-217ENST00000399641 ADARB2-AS1A8MUL3 147 aa9.59□□□□□ -0.87
CACNA1C-217ENST00000399641 LHX2P50458 406 aa9.59□□□□□ -0.87
CACNA1C-217ENST00000399641 SPACA3Q8IXA5 215 aa9.59□□□□□ -0.87
CACNA1C-217ENST00000399641 ZNF107Q9UII5 783 aaPredicted RBP9.59□□□□□ -0.87
CACNA1C-217ENST00000399641 C5P01031 1676 aa9.58□□□□□ -0.88
CACNA1C-217ENST00000399641 C20orf27Q9GZN8 174 aa9.58□□□□□ -0.88
CACNA1C-217ENST00000399641 NHP2Q9NX24 153 aaKnown RBP9.58□□□□□ -0.88
CACNA1C-217ENST00000399641 TRAV25A0A0B4J276 109 aa9.58□□□□□ -0.88
CACNA1C-217ENST00000399641 MOSP00540 346 aa9.58□□□□□ -0.88
CACNA1C-217ENST00000399641 IGHV3-53P01767 116 aa9.58□□□□□ -0.88
CACNA1C-217ENST00000399641 CBLN1P23435 193 aa9.58□□□□□ -0.88
CACNA1C-217ENST00000399641 ACSF3Q4G176 576 aaPredicted RBP9.58□□□□□ -0.88
CACNA1C-217ENST00000399641 PRSS41Q7RTY9 318 aa9.58□□□□□ -0.88
CACNA1C-217ENST00000399641 EPPINO95925 133 aa9.58□□□□□ -0.88
CACNA1C-217ENST00000399641 GNLYP22749 145 aa9.58□□□□□ -0.88
CACNA1C-217ENST00000399641 P2RY1P47900 373 aa9.58□□□□□ -0.88
CACNA1C-217ENST00000399641 EVX1P49640 407 aa9.58□□□□□ -0.88
CACNA1C-217ENST00000399641 WDR82Q6UXN9 313 aa9.58□□□□□ -0.88
CACNA1C-217ENST00000399641 SIGMAR1Q99720 223 aa9.58□□□□□ -0.88
CACNA1C-217ENST00000399641 SF3B5Q9BWJ5 86 aaKnown RBP9.58□□□□□ -0.88
CACNA1C-217ENST00000399641 CACNA1SQ13698 1873 aa9.58□□□□□ -0.88
CACNA1C-217ENST00000399641 TMEM8BA6NDV4 472 aa9.58□□□□□ -0.88
CACNA1C-217ENST00000399641 EPOPA6NHQ4 379 aa9.58□□□□□ -0.88
CACNA1C-217ENST00000399641 CSRP1P21291 193 aaKnown RBP9.58□□□□□ -0.88
CACNA1C-217ENST00000399641 CYB561D1Q8N8Q1 229 aa9.58□□□□□ -0.88
CACNA1C-217ENST00000399641 NAA38Q9BRA0 125 aaKnown RBP9.58□□□□□ -0.88
CACNA1C-217ENST00000399641 SEMA5BQ9P283 1151 aa9.58□□□□□ -0.88
CACNA1C-217ENST00000399641 MYH15Q9Y2K3 1946 aa9.58□□□□□ -0.88
CACNA1C-217ENST00000399641 LOC101059948A0A1B0GTJ6 334 aa9.58□□□□□ -0.88
CACNA1C-217ENST00000399641 ATP6V0CP27449 155 aa9.58□□□□□ -0.88
CACNA1C-217ENST00000399641 SRSF7Q16629 238 aaKnown RBP eCLIP9.58□□□□□ -0.88
CACNA1C-217ENST00000399641 ZNF818PQ6ZRF7 136 aa9.58□□□□□ -0.88
CACNA1C-217ENST00000399641 NIT1Q86X76 327 aa9.58□□□□□ -0.88
CACNA1C-217ENST00000399641 SOCS1O15524 211 aa9.57□□□□□ -0.88
CACNA1C-217ENST00000399641 APOHP02749 345 aaPredicted RBP9.57□□□□□ -0.88
CACNA1C-217ENST00000399641 FXYD7P58549 80 aa9.57□□□□□ -0.88
CACNA1C-217ENST00000399641 C10orf111Q8N326 155 aa9.57□□□□□ -0.88
CACNA1C-217ENST00000399641 TMEM252Q8N6L7 170 aa9.57□□□□□ -0.88
CACNA1C-217ENST00000399641 SEPSECSQ9HD40 501 aaKnown RBP9.57□□□□□ -0.88
CACNA1C-217ENST00000399641 TNFSF18Q9UNG2 199 aa9.57□□□□□ -0.88
CACNA1C-217ENST00000399641 TRAV12-1A0A0B4J245 112 aa9.57□□□□□ -0.88
CACNA1C-217ENST00000399641 IGHV1-69-2A0A0G2JMI3 117 aa9.57□□□□□ -0.88
CACNA1C-217ENST00000399641 PAX4O43316 350 aa9.57□□□□□ -0.88
CACNA1C-217ENST00000399641 MIC13Q5XKP0 118 aa9.57□□□□□ -0.88
CACNA1C-217ENST00000399641 DNM1P46Q6ZS02 220 aa9.57□□□□□ -0.88
CACNA1C-217ENST00000399641 LCNL1Q6ZST4 164 aa9.57□□□□□ -0.88
CACNA1C-217ENST00000399641 MAVSQ7Z434 540 aa9.57□□□□□ -0.88
CACNA1C-217ENST00000399641 CHCHD5Q9BSY4 110 aa9.57□□□□□ -0.88
CACNA1C-217ENST00000399641 C17orf51A8MQB3 221 aa9.57□□□□□ -0.88
CACNA1C-217ENST00000399641 B9A039 149 aa9.57□□□□□ -0.88
CACNA1C-217ENST00000399641 TMEM250H0YL14 139 aa9.57□□□□□ -0.88
CACNA1C-217ENST00000399641 MS4A3Q96HJ5 214 aa9.57□□□□□ -0.88
CACNA1C-217ENST00000399641 ZFPL1O95159 310 aa9.57□□□□□ -0.88
CACNA1C-217ENST00000399641 ARL14EPLP0DKL9 152 aa9.57□□□□□ -0.88
CACNA1C-217ENST00000399641 TNFSF10P50591 281 aa9.57□□□□□ -0.88
CACNA1C-217ENST00000399641 FAM219BQ5XKK7 198 aa9.57□□□□□ -0.88
CACNA1C-217ENST00000399641 PDFQ9HBH1 243 aa9.57□□□□□ -0.88
CACNA1C-217ENST00000399641 A0A0A6YYD5 115 aa9.57□□□□□ -0.88
CACNA1C-217ENST00000399641 LINC01465Q8N7H1 131 aa9.57□□□□□ -0.88
CACNA1C-217ENST00000399641 SAP25Q8TEE9 199 aa9.57□□□□□ -0.88
CACNA1C-217ENST00000399641 SLC25A28Q96A46 364 aa9.57□□□□□ -0.88
CACNA1C-217ENST00000399641 MYEOVQ96EZ4 313 aa9.57□□□□□ -0.88
CACNA1C-217ENST00000399641 TMEM126AQ9H061 195 aa9.57□□□□□ -0.88
CACNA1C-217ENST00000399641 FAM60AQ9NP50 221 aa9.57□□□□□ -0.88
CACNA1C-217ENST00000399641 VKORC1Q9BQB6 163 aa9.56□□□□□ -0.88
CACNA1C-217ENST00000399641 TMEM74BQ9NUR3 256 aa9.56□□□□□ -0.88
CACNA1C-217ENST00000399641 EDIL3O43854 480 aa9.56□□□□□ -0.88
CACNA1C-217ENST00000399641 CDKN1AP38936 164 aa9.56□□□□□ -0.88
CACNA1C-217ENST00000399641 TCTEX1D4Q5JR98 221 aa9.56□□□□□ -0.88
CACNA1C-217ENST00000399641 LRTM2Q8N967 370 aa9.56□□□□□ -0.88
CACNA1C-217ENST00000399641 TRGV3P03979 118 aa9.56□□□□□ -0.88
CACNA1C-217ENST00000399641 CD28P10747 220 aa9.56□□□□□ -0.88
CACNA1C-217ENST00000399641 APOBEC3AP31941 199 aaPredicted RBP9.56□□□□□ -0.88
CACNA1C-217ENST00000399641 SPRED2Q7Z698 418 aa9.56□□□□□ -0.88
CACNA1C-217ENST00000399641 GPHA2Q96T91 129 aa9.56□□□□□ -0.88
CACNA1C-217ENST00000399641 IGHV1-45A0A0A0MS14 117 aa9.56□□□□□ -0.88
CACNA1C-217ENST00000399641 CRYBB3P26998 211 aa9.56□□□□□ -0.88
CACNA1C-217ENST00000399641 QTRT1Q9BXR0 403 aaKnown RBP9.56□□□□□ -0.88
CACNA1C-217ENST00000399641 M0R2P5 195 aa9.56□□□□□ -0.88
CACNA1C-217ENST00000399641 ITGB1BP1O14713 200 aa9.56□□□□□ -0.88
CACNA1C-217ENST00000399641 NDUFB6O95139 128 aa9.56□□□□□ -0.88
CACNA1C-217ENST00000399641 IGHV3-11P01762 117 aa9.56□□□□□ -0.88
CACNA1C-217ENST00000399641 OR8B12Q8NGG6 310 aa9.56□□□□□ -0.88
CACNA1C-217ENST00000399641 FGF20Q9NP95 211 aaPredicted RBP9.56□□□□□ -0.88
CACNA1C-217ENST00000399641 ASB1Q9Y576 335 aa9.56□□□□□ -0.88
CACNA1C-217ENST00000399641 MPTX1A8MV57 137 aa9.56□□□□□ -0.88
CACNA1C-217ENST00000399641 CTAG2O75638 210 aa9.56□□□□□ -0.88
CACNA1C-217ENST00000399641 VENTXO95231 258 aa9.56□□□□□ -0.88
CACNA1C-217ENST00000399641 GAGE2BQ13066 116 aa9.56□□□□□ -0.88
CACNA1C-217ENST00000399641 ZFAND6Q6FIF0 208 aa9.56□□□□□ -0.88
CACNA1C-217ENST00000399641 OTOSQ8NHW6 89 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms