RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 NPIPB6E9PJ23 425 aa12.14□□□□□ -0.47
PCDHA11-201ENST00000398640 SMAGPQ0VAQ4 97 aa12.14□□□□□ -0.47
PCDHA11-201ENST00000398640 WDYHV1Q96HA8 205 aa12.14□□□□□ -0.47
PCDHA11-201ENST00000398640 NUP214P35658 2090 aaPredicted RBP12.14□□□□□ -0.47
PCDHA11-201ENST00000398640 FGFRL1Q8N441 504 aa12.13□□□□□ -0.47
PCDHA11-201ENST00000398640 SGMS2Q8NHU3 365 aa12.13□□□□□ -0.47
PCDHA11-201ENST00000398640 TMEM106BQ9NUM4 274 aa12.13□□□□□ -0.47
PCDHA11-201ENST00000398640 DNAJC13O75165 2243 aa12.13□□□□□ -0.47
PCDHA11-201ENST00000398640 K7ENP7 123 aa12.13□□□□□ -0.47
PCDHA11-201ENST00000398640 NUDT3O95989 172 aa12.13□□□□□ -0.47
PCDHA11-201ENST00000398640 GPX1P07203 203 aa12.13□□□□□ -0.47
PCDHA11-201ENST00000398640 ELOA3CA0A087WX78 387 aaPredicted RBP12.13□□□□□ -0.47
PCDHA11-201ENST00000398640 J3QKU1 62 aa12.13□□□□□ -0.47
PCDHA11-201ENST00000398640 NPBWR2P48146 333 aa12.13□□□□□ -0.47
PCDHA11-201ENST00000398640 IBA57Q5T440 356 aaKnown RBP12.13□□□□□ -0.47
PCDHA11-201ENST00000398640 CYB561D1Q8N8Q1 229 aa12.13□□□□□ -0.47
PCDHA11-201ENST00000398640 ZNRF1Q8ND25 227 aa12.13□□□□□ -0.47
PCDHA11-201ENST00000398640 OR9G1Q8NH87 305 aa12.13□□□□□ -0.47
PCDHA11-201ENST00000398640 NEU4Q8WWR8 484 aaPredicted RBP12.13□□□□□ -0.47
PCDHA11-201ENST00000398640 ZNF430Q9H8G1 570 aaPredicted RBP12.13□□□□□ -0.47
PCDHA11-201ENST00000398640 MOB4Q9Y3A3 225 aa12.13□□□□□ -0.47
PCDHA11-201ENST00000398640 KBTBD11O94819 623 aa12.13□□□□□ -0.47
PCDHA11-201ENST00000398640 LIMS1P48059 325 aa12.13□□□□□ -0.47
PCDHA11-201ENST00000398640 CRYBA2P53672 197 aa12.13□□□□□ -0.47
PCDHA11-201ENST00000398640 SNRPD3P62318 126 aaKnown RBP12.13□□□□□ -0.47
PCDHA11-201ENST00000398640 WDR25Q64LD2 544 aaPredicted RBP12.13□□□□□ -0.47
PCDHA11-201ENST00000398640 KLK15Q9H2R5 256 aa12.13□□□□□ -0.47
PCDHA11-201ENST00000398640 MRPS18CQ9Y3D5 142 aaKnown RBP12.13□□□□□ -0.47
PCDHA11-201ENST00000398640 C17orf82Q86X59 251 aaPredicted RBP12.12□□□□□ -0.47
PCDHA11-201ENST00000398640 C2orf83Q53S99 150 aa12.12□□□□□ -0.47
PCDHA11-201ENST00000398640 GPR146Q96CH1 333 aa12.12□□□□□ -0.47
PCDHA11-201ENST00000398640 NEU1Q99519 415 aa12.12□□□□□ -0.47
PCDHA11-201ENST00000398640 IGLV1-36A0A0B4J1U3 117 aa12.12□□□□□ -0.47
PCDHA11-201ENST00000398640 S1PR2O95136 353 aa12.12□□□□□ -0.47
PCDHA11-201ENST00000398640 ZNF250P15622 560 aa12.12□□□□□ -0.47
PCDHA11-201ENST00000398640 ANOS1P23352 680 aa12.12□□□□□ -0.47
PCDHA11-201ENST00000398640 TMEM45BQ96B21 275 aa12.12□□□□□ -0.47
PCDHA11-201ENST00000398640 TMEM222Q9H0R3 208 aa12.12□□□□□ -0.47
PCDHA11-201ENST00000398640 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.12□□□□□ -0.47
PCDHA11-201ENST00000398640 FBLL1A6NHQ2 334 aaKnown RBP12.12□□□□□ -0.47
PCDHA11-201ENST00000398640 ZG16O60844 167 aa12.12□□□□□ -0.47
PCDHA11-201ENST00000398640 STPG2Q8N412 459 aa12.12□□□□□ -0.47
PCDHA11-201ENST00000398640 WNT5BQ9H1J7 359 aa12.12□□□□□ -0.47
PCDHA11-201ENST00000398640 PQLC2Q6ZP29 291 aa12.12□□□□□ -0.47
PCDHA11-201ENST00000398640 C9orf106Q8NAJ2 232 aa12.12□□□□□ -0.47
PCDHA11-201ENST00000398640 ZFP30Q9Y2G7 519 aa12.12□□□□□ -0.47
PCDHA11-201ENST00000398640 ACAA1P09110 424 aaPredicted RBP12.11□□□□□ -0.47
PCDHA11-201ENST00000398640 SEC11BP0C7V7 166 aa12.11□□□□□ -0.47
PCDHA11-201ENST00000398640 ZNF383Q8NA42 475 aa12.11□□□□□ -0.47
PCDHA11-201ENST00000398640 HSPB1P04792 205 aaKnown RBP12.11□□□□□ -0.47
PCDHA11-201ENST00000398640 UQCRFS1P47985 274 aa12.11□□□□□ -0.47
PCDHA11-201ENST00000398640 ZNF56Q15929 161 aa12.11□□□□□ -0.47
PCDHA11-201ENST00000398640 CHAC2Q8WUX2 184 aa12.11□□□□□ -0.47
PCDHA11-201ENST00000398640 IFT22Q9H7X7 185 aa12.11□□□□□ -0.47
PCDHA11-201ENST00000398640 NPIPB11E5RHQ5 1161 aa12.11□□□□□ -0.47
PCDHA11-201ENST00000398640 BCL2P10415 239 aa12.11□□□□□ -0.47
PCDHA11-201ENST00000398640 ZNF25P17030 456 aaPredicted RBP12.11□□□□□ -0.47
PCDHA11-201ENST00000398640 RELQ04864 619 aaPredicted RBP12.11□□□□□ -0.47
PCDHA11-201ENST00000398640 ST6GALNAC3Q8NDV1 305 aa12.11□□□□□ -0.47
PCDHA11-201ENST00000398640 QTRT1Q9BXR0 403 aaKnown RBP12.11□□□□□ -0.47
PCDHA11-201ENST00000398640 TNFSF18Q9UNG2 199 aa12.11□□□□□ -0.47
PCDHA11-201ENST00000398640 MTCL1Q9Y4B5 1905 aaKnown RBP12.11□□□□□ -0.47
PCDHA11-201ENST00000398640 FSTP19883 344 aa12.11□□□□□ -0.47
PCDHA11-201ENST00000398640 FAM3BP58499 235 aaPredicted RBP12.11□□□□□ -0.47
PCDHA11-201ENST00000398640 SELENOHQ8IZQ5 122 aaKnown RBP12.11□□□□□ -0.47
PCDHA11-201ENST00000398640 TMEM252Q8N6L7 170 aa12.11□□□□□ -0.47
PCDHA11-201ENST00000398640 OR4C13Q8NGP0 309 aa12.11□□□□□ -0.47
PCDHA11-201ENST00000398640 A8MWL6 223 aa12.1□□□□□ -0.47
PCDHA11-201ENST00000398640 C1QL1O75973 258 aa12.1□□□□□ -0.47
PCDHA11-201ENST00000398640 IGKV1D-33P01593 117 aa12.1□□□□□ -0.47
PCDHA11-201ENST00000398640 IGKV1-33P01594 117 aa12.1□□□□□ -0.47
PCDHA11-201ENST00000398640 CXCL2P19875 107 aa12.1□□□□□ -0.47
PCDHA11-201ENST00000398640 NPPCP23582 126 aa12.1□□□□□ -0.47
PCDHA11-201ENST00000398640 HIST1H1AQ02539 215 aaPredicted RBP12.1□□□□□ -0.47
PCDHA11-201ENST00000398640 ZNF343Q6P1L6 599 aa12.1□□□□□ -0.47
PCDHA11-201ENST00000398640 GLRX5Q86SX6 157 aa12.1□□□□□ -0.47
PCDHA11-201ENST00000398640 SSC4DQ8WTU2 575 aa12.1□□□□□ -0.47
PCDHA11-201ENST00000398640 LINC00470Q9BZP3 86 aa12.1□□□□□ -0.47
PCDHA11-201ENST00000398640 KCNE5Q9UJ90 142 aa12.1□□□□□ -0.47
PCDHA11-201ENST00000398640 TUBD1Q9UJT1 453 aa12.1□□□□□ -0.47
PCDHA11-201ENST00000398640 A0A087X0M5 115 aa12.1□□□□□ -0.47
PCDHA11-201ENST00000398640 A0A1B0GX30 115 aa12.1□□□□□ -0.47
PCDHA11-201ENST00000398640 DLX6P56179 175 aa12.1□□□□□ -0.47
PCDHA11-201ENST00000398640 FAM206AQ9NX38 181 aa12.1□□□□□ -0.47
PCDHA11-201ENST00000398640 TICRRQ7Z2Z1 1910 aa12.1□□□□□ -0.47
PCDHA11-201ENST00000398640 A6NDN8 102 aa12.1□□□□□ -0.47
PCDHA11-201ENST00000398640 FAM74A7A6NL05 159 aa12.1□□□□□ -0.47
PCDHA11-201ENST00000398640 DIRC3C9JPN6 131 aa12.1□□□□□ -0.47
PCDHA11-201ENST00000398640 COMPP49747 757 aaPredicted RBP12.1□□□□□ -0.47
PCDHA11-201ENST00000398640 METRNQ9UJH8 293 aa12.1□□□□□ -0.47
PCDHA11-201ENST00000398640 SRSF6Q13247 344 aaKnown RBP12.1□□□□□ -0.47
PCDHA11-201ENST00000398640 H1FOOQ8IZA3 346 aaPredicted RBP12.1□□□□□ -0.47
PCDHA11-201ENST00000398640 C1orf162Q8NEQ5 155 aaPredicted RBP12.1□□□□□ -0.47
PCDHA11-201ENST00000398640 MARCH11A6NNE9 402 aa12.1□□□□□ -0.47
PCDHA11-201ENST00000398640 CD99P14209 185 aa12.1□□□□□ -0.47
PCDHA11-201ENST00000398640 FLVCR1-AS1Q8TAF5 88 aa12.1□□□□□ -0.47
PCDHA11-201ENST00000398640 MOSP00540 346 aa12.09□□□□□ -0.47
PCDHA11-201ENST00000398640 CECR9P0C854 216 aa12.09□□□□□ -0.47
PCDHA11-201ENST00000398640 VDAC2P45880 294 aaPredicted RBP12.09□□□□□ -0.47
PCDHA11-201ENST00000398640 PSG9Q00887 426 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms