RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 PMCHL2Q9BQD1 86 aa10.61□□□□□ -0.71
SMU1-201ENST00000397149 IDI2-AS1Q9NZ38 188 aa10.61□□□□□ -0.71
SMU1-201ENST00000397149 ZNF142P52746 1687 aaPredicted RBP10.61□□□□□ -0.71
SMU1-201ENST00000397149 IGHV1OR15-9A0A0B4J2B8 117 aa10.61□□□□□ -0.71
SMU1-201ENST00000397149 LNP1A1A4G5 178 aa10.61□□□□□ -0.71
SMU1-201ENST00000397149 NPIPB11E5RHQ5 1161 aa10.61□□□□□ -0.71
SMU1-201ENST00000397149 H0YL77 283 aa10.61□□□□□ -0.71
SMU1-201ENST00000397149 AGAP20933 346 aa10.61□□□□□ -0.71
SMU1-201ENST00000397149 CBLN1P23435 193 aa10.61□□□□□ -0.71
SMU1-201ENST00000397149 ARFGEF2Q9Y6D5 1785 aa10.61□□□□□ -0.71
SMU1-201ENST00000397149 OR11H7Q8NGC8 314 aa10.61□□□□□ -0.71
SMU1-201ENST00000397149 NRTNQ99748 197 aa10.61□□□□□ -0.71
SMU1-201ENST00000397149 CLDND2Q8NHS1 167 aa10.61□□□□□ -0.71
SMU1-201ENST00000397149 NEUROG1Q92886 237 aa10.61□□□□□ -0.71
SMU1-201ENST00000397149 ANAPC10Q9UM13 185 aa10.61□□□□□ -0.71
SMU1-201ENST00000397149 FOXA2Q9Y261 457 aaPredicted RBP10.61□□□□□ -0.71
SMU1-201ENST00000397149 FAM208AQ9UK61 1670 aaKnown RBP10.61□□□□□ -0.71
SMU1-201ENST00000397149 ADARB2-AS1A8MUL3 147 aa10.6□□□□□ -0.71
SMU1-201ENST00000397149 GPR183P32249 361 aa10.6□□□□□ -0.71
SMU1-201ENST00000397149 NIT1Q86X76 327 aa10.6□□□□□ -0.71
SMU1-201ENST00000397149 ZNF385AQ96PM9 386 aaKnown RBP10.6□□□□□ -0.71
SMU1-201ENST00000397149 WDR54Q9H977 334 aa10.6□□□□□ -0.71
SMU1-201ENST00000397149 H3BUT2 72 aa10.6□□□□□ -0.71
SMU1-201ENST00000397149 HRKO00198 91 aa10.6□□□□□ -0.71
SMU1-201ENST00000397149 C8orf88P0DMB2 117 aa10.6□□□□□ -0.71
SMU1-201ENST00000397149 SPINT1O43278 529 aa10.6□□□□□ -0.71
SMU1-201ENST00000397149 ZG16O60844 167 aa10.6□□□□□ -0.71
SMU1-201ENST00000397149 ORAOV1Q8WV07 137 aa10.6□□□□□ -0.71
SMU1-201ENST00000397149 MBD1Q9UIS9 605 aaPredicted RBP10.6□□□□□ -0.71
SMU1-201ENST00000397149 C19orf67A6NJJ6 358 aa10.6□□□□□ -0.71
SMU1-201ENST00000397149 SDHCQ99643 169 aaPredicted RBP10.6□□□□□ -0.71
SMU1-201ENST00000397149 NHP2Q9NX24 153 aaKnown RBP10.6□□□□□ -0.71
SMU1-201ENST00000397149 ARHGEF17Q96PE2 2063 aaPredicted RBP10.6□□□□□ -0.71
SMU1-201ENST00000397149 RNF182Q8N6D2 247 aa10.6□□□□□ -0.71
SMU1-201ENST00000397149 TP53I13Q8NBR0 393 aaPredicted RBP10.6□□□□□ -0.71
SMU1-201ENST00000397149 MGST3O14880 152 aa10.6□□□□□ -0.71
SMU1-201ENST00000397149 LHBP01229 141 aa10.6□□□□□ -0.71
SMU1-201ENST00000397149 DDTP30046 118 aa10.6□□□□□ -0.71
SMU1-201ENST00000397149 LEPP41159 167 aa10.6□□□□□ -0.71
SMU1-201ENST00000397149 CD300CQ08708 224 aa10.6□□□□□ -0.71
SMU1-201ENST00000397149 GPBAR1Q8TDU6 330 aa10.6□□□□□ -0.71
SMU1-201ENST00000397149 SDF2L1Q9HCN8 221 aa10.6□□□□□ -0.71
SMU1-201ENST00000397149 IGHV3-73A0A0B4J1V6 119 aa10.59□□□□□ -0.71
SMU1-201ENST00000397149 DPRXA6NFQ7 191 aa10.59□□□□□ -0.71
SMU1-201ENST00000397149 LHX2P50458 406 aa10.59□□□□□ -0.71
SMU1-201ENST00000397149 LSM6P62312 80 aaKnown RBP10.59□□□□□ -0.71
SMU1-201ENST00000397149 FDCSPQ8NFU4 85 aa10.59□□□□□ -0.71
SMU1-201ENST00000397149 SLIRPQ9GZT3 109 aaKnown RBP10.59□□□□□ -0.71
SMU1-201ENST00000397149 TNFSF18Q9UNG2 199 aa10.59□□□□□ -0.71
SMU1-201ENST00000397149 LDLRAD2Q5SZI1 272 aa10.59□□□□□ -0.71
SMU1-201ENST00000397149 TCF23Q7RTU1 214 aa10.59□□□□□ -0.71
SMU1-201ENST00000397149 UPK3AO75631 287 aa10.59□□□□□ -0.71
SMU1-201ENST00000397149 FUT5Q11128 374 aa10.59□□□□□ -0.71
SMU1-201ENST00000397149 WDR34Q96EX3 536 aa10.59□□□□□ -0.71
SMU1-201ENST00000397149 MS4A6AQ9H2W1 248 aa10.59□□□□□ -0.71
SMU1-201ENST00000397149 R3HDMLQ9H3Y0 253 aa10.59□□□□□ -0.71
SMU1-201ENST00000397149 PAX4O43316 350 aa10.59□□□□□ -0.71
SMU1-201ENST00000397149 CLPSP04118 112 aa10.59□□□□□ -0.71
SMU1-201ENST00000397149 PRTN3P24158 256 aa10.59□□□□□ -0.71
SMU1-201ENST00000397149 TMEM86BQ8N661 226 aa10.59□□□□□ -0.71
SMU1-201ENST00000397149 PDFQ9HBH1 243 aa10.59□□□□□ -0.71
SMU1-201ENST00000397149 GTSCR1Q86UQ5 136 aa10.59□□□□□ -0.71
SMU1-201ENST00000397149 VWC2LB2RUY7 222 aa10.58□□□□□ -0.72
SMU1-201ENST00000397149 GAGE2EQ4V326 116 aa10.58□□□□□ -0.72
SMU1-201ENST00000397149 SSBP4Q9BWG4 385 aaPredicted RBP10.58□□□□□ -0.72
SMU1-201ENST00000397149 SF3B5Q9BWJ5 86 aaKnown RBP10.58□□□□□ -0.72
SMU1-201ENST00000397149 GAGE2DQ9UEU5 116 aa10.58□□□□□ -0.72
SMU1-201ENST00000397149 NALCNQ8IZF0 1738 aa10.58□□□□□ -0.72
SMU1-201ENST00000397149 SURF2Q15527 256 aaPredicted RBP10.58□□□□□ -0.72
SMU1-201ENST00000397149 CENPWQ5EE01 88 aa10.58□□□□□ -0.72
SMU1-201ENST00000397149 ZNF107Q9UII5 783 aaPredicted RBP10.58□□□□□ -0.72
SMU1-201ENST00000397149 KLK13Q9UKR3 277 aa10.58□□□□□ -0.72
SMU1-201ENST00000397149 GPR132Q9UNW8 380 aa10.58□□□□□ -0.72
SMU1-201ENST00000397149 DOPEY2Q9Y3R5 2298 aa10.58□□□□□ -0.72
SMU1-201ENST00000397149 COL9A1P20849 921 aa10.58□□□□□ -0.72
SMU1-201ENST00000397149 FAM19A2Q8N3H0 131 aa10.58□□□□□ -0.72
SMU1-201ENST00000397149 ST6GALNAC2Q9UJ37 374 aa10.58□□□□□ -0.72
SMU1-201ENST00000397149 ELF5Q9UKW6 265 aaPredicted RBP10.58□□□□□ -0.72
SMU1-201ENST00000397149 OGG1O15527 345 aa10.58□□□□□ -0.72
SMU1-201ENST00000397149 PRB1P04280 392 aa10.58□□□□□ -0.72
SMU1-201ENST00000397149 CD33P20138 364 aa10.58□□□□□ -0.72
SMU1-201ENST00000397149 EVI2AP22794 236 aa10.58□□□□□ -0.72
SMU1-201ENST00000397149 OCIAD2Q56VL3 154 aa10.58□□□□□ -0.72
SMU1-201ENST00000397149 LINC00299Q6ZSB3 139 aa10.58□□□□□ -0.72
SMU1-201ENST00000397149 LINC01555Q8NAE3 123 aa10.58□□□□□ -0.72
SMU1-201ENST00000397149 MARS2Q96GW9 593 aaKnown RBP10.58□□□□□ -0.72
SMU1-201ENST00000397149 IGHV5-10-1A0A0J9YXX1 117 aa10.58□□□□□ -0.72
SMU1-201ENST00000397149 CGB7P0DN87 165 aa10.58□□□□□ -0.72
SMU1-201ENST00000397149 ESDP10768 282 aa10.58□□□□□ -0.72
SMU1-201ENST00000397149 ZP4Q12836 540 aa10.58□□□□□ -0.72
SMU1-201ENST00000397149 VSIG8P0DPA2 414 aa10.58□□□□□ -0.72
SMU1-201ENST00000397149 CD28P10747 220 aa10.58□□□□□ -0.72
SMU1-201ENST00000397149 PPIFP30405 207 aaKnown RBP10.58□□□□□ -0.72
SMU1-201ENST00000397149 HOXD3P31249 432 aaPredicted RBP10.58□□□□□ -0.72
SMU1-201ENST00000397149 LINC00596Q86U02 117 aa10.58□□□□□ -0.72
SMU1-201ENST00000397149 TAF15Q92804 592 aaKnown RBP eCLIP10.58□□□□□ -0.72
SMU1-201ENST00000397149 SH3BGRL3Q9H299 93 aa10.58□□□□□ -0.72
SMU1-201ENST00000397149 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.57□□□□□ -0.72
SMU1-201ENST00000397149 GLRXP35754 106 aa10.57□□□□□ -0.72
SMU1-201ENST00000397149 FGFRL1Q8N441 504 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms