RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 SPCS3P61009 180 aa12.29□□□□□ -0.44
CBX3-202ENST00000396386 ADORA2A-AS1P86434 159 aa12.29□□□□□ -0.44
CBX3-202ENST00000396386 LRRC10Q5BKY1 277 aa12.29□□□□□ -0.44
CBX3-202ENST00000396386 C17orf50Q8WW18 174 aa12.29□□□□□ -0.44
CBX3-202ENST00000396386 ZNF714Q96N38 554 aa12.29□□□□□ -0.44
CBX3-202ENST00000396386 HIPK2Q9H2X6 1198 aa12.29□□□□□ -0.44
CBX3-202ENST00000396386 TIMM9Q9Y5J7 89 aa12.29□□□□□ -0.44
CBX3-202ENST00000396386 IGHV1-69-2A0A0G2JMI3 117 aa12.29□□□□□ -0.44
CBX3-202ENST00000396386 PMS2P5A8MQ11 134 aa12.29□□□□□ -0.44
CBX3-202ENST00000396386 PLAUP00749 431 aa12.29□□□□□ -0.44
CBX3-202ENST00000396386 GRNP28799 593 aaKnown RBP12.29□□□□□ -0.44
CBX3-202ENST00000396386 NPBWR1P48145 328 aa12.29□□□□□ -0.44
CBX3-202ENST00000396386 SERF2P84101 59 aa12.29□□□□□ -0.44
CBX3-202ENST00000396386 ZNF383Q8NA42 475 aa12.29□□□□□ -0.44
CBX3-202ENST00000396386 OR10P1Q8NGE3 313 aa12.29□□□□□ -0.44
CBX3-202ENST00000396386 OR52E5Q8NH55 327 aa12.29□□□□□ -0.44
CBX3-202ENST00000396386 H1FXQ92522 213 aaKnown RBP12.29□□□□□ -0.44
CBX3-202ENST00000396386 TAF15Q92804 592 aaKnown RBP eCLIP12.29□□□□□ -0.44
CBX3-202ENST00000396386 CISD1Q9NZ45 108 aaKnown RBP12.29□□□□□ -0.44
CBX3-202ENST00000396386 PCNX1Q96RV3 2341 aa12.28□□□□□ -0.44
CBX3-202ENST00000396386 TLN1Q9Y490 2541 aaKnown RBP12.28□□□□□ -0.44
CBX3-202ENST00000396386 TNFRSF13BO14836 293 aaPredicted RBP12.28□□□□□ -0.44
CBX3-202ENST00000396386 RELBQ01201 579 aa12.28□□□□□ -0.44
CBX3-202ENST00000396386 HEPN1Q6WQI6 88 aa12.28□□□□□ -0.44
CBX3-202ENST00000396386 VKORC1L1Q8N0U8 176 aa12.28□□□□□ -0.44
CBX3-202ENST00000396386 SFT2D1Q8WV19 159 aa12.28□□□□□ -0.44
CBX3-202ENST00000396386 RBMXL1Q96E39 390 aaKnown RBP12.28□□□□□ -0.44
CBX3-202ENST00000396386 SMDT1Q9H4I9 107 aa12.28□□□□□ -0.44
CBX3-202ENST00000396386 YLPM1P49750 1951 aaKnown RBP12.27□□□□□ -0.44
CBX3-202ENST00000396386 TMEM8BA6NDV4 472 aa12.27□□□□□ -0.44
CBX3-202ENST00000396386 FCN3O75636 299 aa12.27□□□□□ -0.44
CBX3-202ENST00000396386 ARG1P05089 322 aa12.27□□□□□ -0.44
CBX3-202ENST00000396386 CCL3L1P16619 93 aa12.27□□□□□ -0.44
CBX3-202ENST00000396386 PDLIM3Q53GG5 364 aaPredicted RBP12.27□□□□□ -0.44
CBX3-202ENST00000396386 TMEM41BQ5BJD5 291 aa12.27□□□□□ -0.44
CBX3-202ENST00000396386 LYPD2Q6UXB3 125 aa12.27□□□□□ -0.44
CBX3-202ENST00000396386 CLRN3Q8NCR9 226 aa12.27□□□□□ -0.44
CBX3-202ENST00000396386 RAB39BQ96DA2 213 aa12.27□□□□□ -0.44
CBX3-202ENST00000396386 KAAG1Q9UBP8 84 aa12.27□□□□□ -0.44
CBX3-202ENST00000396386 CTSZQ9UBR2 303 aa12.27□□□□□ -0.44
CBX3-202ENST00000396386 RALYQ9UKM9 306 aaKnown RBP12.27□□□□□ -0.44
CBX3-202ENST00000396386 FASNP49327 2511 aaKnown RBP12.27□□□□□ -0.44
CBX3-202ENST00000396386 TRAV1-1A0A0B4J248 108 aa12.27□□□□□ -0.45
CBX3-202ENST00000396386 RBFOX3A6NFN3 312 aa12.27□□□□□ -0.45
CBX3-202ENST00000396386 C15orf61A6NNL5 157 aa12.27□□□□□ -0.45
CBX3-202ENST00000396386 C15orf62A8K5M9 175 aa12.27□□□□□ -0.45
CBX3-202ENST00000396386 RPP30P78346 268 aaKnown RBP12.27□□□□□ -0.45
CBX3-202ENST00000396386 CCL20P78556 96 aa12.27□□□□□ -0.45
CBX3-202ENST00000396386 TMEM200BQ69YZ2 307 aa12.27□□□□□ -0.45
CBX3-202ENST00000396386 SP5Q6BEB4 398 aaPredicted RBP12.27□□□□□ -0.45
CBX3-202ENST00000396386 ZCCHC14Q8WYQ9 949 aaKnown RBP12.27□□□□□ -0.45
CBX3-202ENST00000396386 SLC35B3Q9H1N7 401 aa12.27□□□□□ -0.45
CBX3-202ENST00000396386 RPRMQ9NS64 109 aa12.27□□□□□ -0.45
CBX3-202ENST00000396386 DVL1O14640 695 aa12.26□□□□□ -0.45
CBX3-202ENST00000396386 SIAH2O43255 324 aa12.26□□□□□ -0.45
CBX3-202ENST00000396386 NDUFA2O43678 99 aa12.26□□□□□ -0.45
CBX3-202ENST00000396386 HRASP01112 189 aa12.26□□□□□ -0.45
CBX3-202ENST00000396386 GNB2P62879 340 aa12.26□□□□□ -0.45
CBX3-202ENST00000396386 POU2AF1Q16633 256 aa12.26□□□□□ -0.45
CBX3-202ENST00000396386 RTL8BQ17RB0 113 aa12.26□□□□□ -0.45
CBX3-202ENST00000396386 VWC2Q2TAL6 325 aa12.26□□□□□ -0.45
CBX3-202ENST00000396386 HFEQ30201 348 aa12.26□□□□□ -0.45
CBX3-202ENST00000396386 ZNF672Q499Z4 452 aaPredicted RBP12.26□□□□□ -0.45
CBX3-202ENST00000396386 DHRS7BQ6IAN0 325 aaPredicted RBP12.26□□□□□ -0.45
CBX3-202ENST00000396386 ZNF429Q86V71 674 aa12.26□□□□□ -0.45
CBX3-202ENST00000396386 MUC15Q8N387 334 aa12.26□□□□□ -0.45
CBX3-202ENST00000396386 CA5BP1Q8WTZ4 195 aa12.26□□□□□ -0.45
CBX3-202ENST00000396386 RHOVQ96L33 236 aa12.26□□□□□ -0.45
CBX3-202ENST00000396386 TRAV3A0A0B4J244 114 aa12.25□□□□□ -0.45
CBX3-202ENST00000396386 ATF4P18848 351 aaPredicted RBP12.25□□□□□ -0.45
CBX3-202ENST00000396386 FGF7P21781 194 aa12.25□□□□□ -0.45
CBX3-202ENST00000396386 LOXP28300 417 aaPredicted RBP12.25□□□□□ -0.45
CBX3-202ENST00000396386 HOXA1P49639 335 aaPredicted RBP12.25□□□□□ -0.45
CBX3-202ENST00000396386 ELLP55199 621 aaPredicted RBP12.25□□□□□ -0.45
CBX3-202ENST00000396386 ARFGEF3Q5TH69 2177 aa12.25□□□□□ -0.45
CBX3-202ENST00000396386 OR4A47Q6IF82 309 aa12.25□□□□□ -0.45
CBX3-202ENST00000396386 TMEM88Q6PEY1 159 aa12.25□□□□□ -0.45
CBX3-202ENST00000396386 ZNF833PQ6ZTB9 187 aa12.25□□□□□ -0.45
CBX3-202ENST00000396386 CENPVQ7Z7K6 275 aaPredicted RBP12.25□□□□□ -0.45
CBX3-202ENST00000396386 VSIRQ9H7M9 311 aa12.25□□□□□ -0.45
CBX3-202ENST00000396386 SLC35D1Q9NTN3 355 aa12.25□□□□□ -0.45
CBX3-202ENST00000396386 TCF19Q9Y242 345 aa12.25□□□□□ -0.45
CBX3-202ENST00000396386 FOXA2Q9Y261 457 aaPredicted RBP12.25□□□□□ -0.45
CBX3-202ENST00000396386 TET2Q6N021 2002 aaPredicted RBP12.25□□□□□ -0.45
CBX3-202ENST00000396386 SFTPCP11686 197 aa12.25□□□□□ -0.45
CBX3-202ENST00000396386 VDAC2P45880 294 aaPredicted RBP12.25□□□□□ -0.45
CBX3-202ENST00000396386 RPS16P62249 146 aaKnown RBP12.25□□□□□ -0.45
CBX3-202ENST00000396386 ZNF506Q5JVG8 444 aa12.25□□□□□ -0.45
CBX3-202ENST00000396386 ZNF787Q6DD87 383 aa12.25□□□□□ -0.45
CBX3-202ENST00000396386 CBLN2Q8IUK8 224 aa12.25□□□□□ -0.45
CBX3-202ENST00000396386 RCC1LQ96I51 464 aaKnown RBP12.25□□□□□ -0.45
CBX3-202ENST00000396386 RARRES2Q99969 163 aa12.25□□□□□ -0.45
CBX3-202ENST00000396386 HEYLQ9NQ87 328 aaPredicted RBP12.25□□□□□ -0.45
CBX3-202ENST00000396386 ZNRD1Q9P1U0 126 aa12.25□□□□□ -0.45
CBX3-202ENST00000396386 IGSF10Q6WRI0 2623 aa12.24□□□□□ -0.45
CBX3-202ENST00000396386 IFNA10P01566 189 aa12.24□□□□□ -0.45
CBX3-202ENST00000396386 CT45A6P0DMU7 189 aa12.24□□□□□ -0.45
CBX3-202ENST00000396386 CT45A5P0DMU8 189 aa12.24□□□□□ -0.45
CBX3-202ENST00000396386 CT45A7P0DMV0 189 aa12.24□□□□□ -0.45
CBX3-202ENST00000396386 CDSNQ15517 529 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms